KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:47 2014 Check: 00 .. Name: ENSP00000006526/1-334 Len: 335 Check: 2488 Weight: 1.00 Name: ENSBTAP00000000617/1-331 Len: 335 Check: 351 Weight: 1.00 Name: ENSTTRP00000012062/1-335 Len: 335 Check: 5557 Weight: 1.00 Name: bmy_12421T0/1-251 Len: 335 Check: 3704 Weight: 1.00 Name: BACU010572/1-313 Len: 335 Check: 7074 Weight: 1.00 // 1 50 ENSP00000006526/1-334 MFRWERSIPL RGSAAALCNN LSVLQLPARN LTYFGVVHGP SAQLLSAAPE ENSBTAP00000000617/1-331 MFRRERSIPL RGSAAALCNN LSVLQLPARN LTHFGVVHGP SAQLLSAAPE ENSTTRP00000012062/1-335 MFRRERSIPL RGSAAALCNN LSVLQLPGRN LTHFGVVHGP SAQLLSAAPE bmy_12421T0/1-251 MFRRERSIPL RGSAAALCNN LSVLQLPVRN LTHFGVVHGP SAQLLSAAPE BACU010572/1-313 MFRRERSIPL RGSAAALCNN LSVLQLPVRN LTHFGVVHGP SAQLLSAAPE 51 100 ENSP00000006526/1-334 GVPLAQRQLH AKEGAGVSPP LITQVHWCVL PFRVLLVLTS HRGIQMYESN ENSBTAP00000000617/1-331 GVPLAQRQLH AKEGAGVSPP LITQIHWCVL PFRVLLVLTS HRGIQMYESD ENSTTRP00000012062/1-335 GVPLAQRQLQ AKEGAGVSPP LITQVHWCVL PFRVLLVLTS HRGIQMYESD bmy_12421T0/1-251 GVPLAQRQLQ AKEGAGVSPP LITQVH---- ---------- ---------- BACU010572/1-313 GVPLAQRQLQ AKEGAGVSPP LITQ------ ---------- -----MYESD 101 150 ENSP00000006526/1-334 GYTMVYWHAL DSGDASPVQA VFARGIAASG HFICVGTWSG RVLVFDIPAK ENSBTAP00000000617/1-331 GSVMVYWHAL DAGDASLVQA AFARGIAASG HYVCVGTWSG QVLVFDIPTK ENSTTRP00000012062/1-335 GSVMVYWHAL DAGDASLVQA VFARGIASSG HFICVGMWSG RVLVFDIPAK bmy_12421T0/1-251 ------WCVL PF-------- ---------- ---------- RVLLVLTSHR BACU010572/1-313 GSVMVYWHAL DAGDASLVQA VFARGIAASG HFICVGMWSG RVLVFDIPAK 151 200 ENSP00000006526/1-334 GPNIVLSEEL AGHQMPITDI ATEPAQGQDC VADMVTADDS GLLCVWRSGP ENSBTAP00000000617/1-331 GPNIVLSEEL ARHQTPISDI ATEPAQGQDC VADTVTADDS GLLCVWRSGP ENSTTRP00000012062/1-335 GPNIVLSEEL AGHQTPVTDI ATEPAQGQDC VADMVTADDS GLLCVWQSGP bmy_12421T0/1-251 GI-------- ---------- -------QDC VADMVTADDS GSLCVWRSGP BACU010572/1-313 GPNIVLSEEL AGHQTPVTDI ATEPAQGQDC VADVVTADDS GLLCVWRSGP 201 250 ENSP00000006526/1-334 EFTLLTRIPG FGVPCPSVQL WQGIIAAGYG NGQVHLYEAT TGNLHVQINA ENSBTAP00000000617/1-331 KFKLLTQIPG FGVPCSSVQL WQGTIAAGYG NGQVRLYEAS TGTVHVQIDA ENSTTRP00000012062/1-335 EFKLLTRIPG FGVPCPSVQL WQGTIAAGYG NGQVRLYEAS TGTLHVQIDA bmy_12421T0/1-251 EFKLLTRIPG FGVPCPSVQL WQGTIAAGYG NGQVRLYEAS TGTLHVQIDA BACU010572/1-313 KFKLLTRIPG FGVPCPSVQL WQGTIAAGYG NGQVRLYEAS TGTLHVQIDA 251 300 ENSP00000006526/1-334 HARAICALDL ASEVGKLLSA GEDTFVHIWK LSRNPESGYI EVEHCHGECV ENSBTAP00000000617/1-331 HARAICALDL APE---LLSA AEDTFVHIWK LSRSPEDGYI EVEHCHGECV ENSTTRP00000012062/1-335 HARAICALDL APEVGKLLSA AEDTFVHIWK LSRSPEGGYI EVEHCHGECV bmy_12421T0/1-251 HARAICALDL APEVGKLLSA AEDTFVHIWK LSRSPEGGYI EVEHCHGECV BACU010572/1-313 HARAICALDL APEVGKLLSA AEDTFVHIWK LSRSPEGGYI EVEHCHGECV 301 350 ENSP00000006526/1-334 ADTQLCGARF CDSSGNSFAV TGYDLAEIRR FSSV- ENSBTAP00000000617/1-331 PDTQLCGARF CDPSGSSFAV TGYDVAEILR FSSI- ENSTTRP00000012062/1-335 PDTQVCGARF CDPAGSSFAV TGYDLAEILR FSSVR bmy_12421T0/1-251 PDTQVCGARF CDPSGSSFAV TGYDLAEILR FSSM- BACU010572/1-313 PDTQVCGARF CDPSGSSFAV TGYDLAEILR FSSM-