KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:48 2014 Check: 00 .. Name: ENSP00000345502/1-809 Len: 810 Check: 3134 Weight: 1.00 Name: ENSBTAP00000000631/1-584 Len: 810 Check: 9779 Weight: 1.00 Name: ENSTTRP00000005797/1-592 Len: 810 Check: 1215 Weight: 1.00 Name: bmy_05498T0/1-545 Len: 810 Check: 6614 Weight: 1.00 Name: BACU019120/1-542 Len: 810 Check: 9136 Weight: 1.00 // 1 50 ENSP00000345502/1-809 MEAEGSSAPA RAGSGEGSDS AGGATLKAPK HLWRHEQHHQ YPLRQPQFRL ENSBTAP00000000631/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005797/1-592 ---------- ---------- ---------- ---------- ---------- bmy_05498T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU019120/1-542 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000345502/1-809 LHPHHHLPPP PPPSPQPQPQ CPLQPPPPPP LPPPPPPPGA ARGRYASSGA ENSBTAP00000000631/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005797/1-592 ---------- ---------- ---------- ---------- ---------- bmy_05498T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU019120/1-542 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000345502/1-809 TGRVRHRGYS DTERYLYCRA MDRTSYAVET GHRPGLKKSR MSWPSSFQGL ENSBTAP00000000631/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005797/1-592 ---------- ---------- ---------- ---------- ---------- bmy_05498T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU019120/1-542 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000345502/1-809 RRFDVDNGTS AGRSPLDPMT SPGSGLILQA NFVHSQRRES FLYRSDSDYD ENSBTAP00000000631/1-584 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005797/1-592 ---------- ---------- ---------- ---------- ---------- bmy_05498T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU019120/1-542 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000345502/1-809 LSPKSMSRNS SIASDIHGDD LIVTPFAQVL ASLRTVRNNF AALTNLQDRA ENSBTAP00000000631/1-584 ---------- ---------- --MKKQPSCA GTGHPSMAGY GRMAPFE--L ENSTTRP00000005797/1-592 ---------- ------HGDD LIVTPFAQVL ASLRTVRNNF AALTNLQDRA bmy_05498T0/1-545 ---------- ---------- --MKEQPSCA GTGHPSMTGY GRMAPFE--L BACU019120/1-542 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000345502/1-809 PSKRSPMCNQ PSINKATITE EAYQKLASET LEELDWCLDQ LETLQTRHSV ENSBTAP00000000631/1-584 AGGPVKRLRT ESPFPYLFAE EAYQKLASET LEELDWCLDQ LETLQTRHSV ENSTTRP00000005797/1-592 PSXXXXXXXX XXXXXXXXXX EAYQKLASET LEELDWCLDQ LETLQTRHSV bmy_05498T0/1-545 AGGPVKRLRT ECPFPYLFAE EAYQKLASET LEELDWCLDQ LETLQTRHSV BACU019120/1-542 ---------- --------AE EAYQKLASET LEELDWCLDQ LETLQTRHSV 301 350 ENSP00000345502/1-809 SEMASNKFKR MLNRELTHLS EMSRSGNQVS EFISNTFLDK QHEVEIPSPT ENSBTAP00000000631/1-584 SEMASNKFKR MLNRELTHLS EMSRSGNQVS EYISNTFLDK QHEVEIPSPT ENSTTRP00000005797/1-592 SEMASNKFKR MLNRELTHLS EMSRSGNQVS EYISNTFLDK QHEVEIPSPT bmy_05498T0/1-545 SEMASNKFKR MLNRELTHLS EMSRSGNQVS EYISNTFLDK QHEVEIPSPT BACU019120/1-542 SEMASNKFKR MLNRELTHLS EMSRSGNQVS EYISNTFLDK QHEVEIPSPT 351 400 ENSP00000345502/1-809 QKEKEKKKRP MSQISGVKKL MHSSSLTNSS IPRFGVKTEQ EDVLAKELED ENSBTAP00000000631/1-584 QKEKEKKKRP MSQISGVKKL MHSSSLTNSS IPRFGVKTEQ EDVLAKELED ENSTTRP00000005797/1-592 QKEKEKKKRP MSQISGVKKL MHSSSLTNSS IPRFGVKTEQ EDILAKELED bmy_05498T0/1-545 QKEKEKKKRP MSQISGVKKL MHSSSLTNSS IPRFGVKTEQ EDILAKELED BACU019120/1-542 QKEKEKKKRP MSQISGVKKL MHSSSLTNSS IPRFGVKTEQ EDILAKELED 401 450 ENSP00000345502/1-809 VNKWGLHVFR IAELSGNRPL TVIMHTIFQE RDLLKTFKIP VDTLITYLMT ENSBTAP00000000631/1-584 VNKWGLHVFR IAELSGNRPL TVIMHTIFQE RDLLKTFKIP VDTLITYLMT ENSTTRP00000005797/1-592 VNKWGLHVFR IAELSGNRPL TVIMHTIFQE RDLLKTFKIP VDTLITYLMT bmy_05498T0/1-545 VNKWGLHVFR IAELSGNRPL TVIMHTIFQE RDLLKTFKIP VDTLITYLMT BACU019120/1-542 VNKWGLHVFR IAELSGNRPL TVIMHTIFQE RDLLKTFKIP VDTLITYLMT 451 500 ENSP00000345502/1-809 LEDHYHADVA YHNNIHAADV VQSTHVLLST PALEAVFTDL EILAAIFASA ENSBTAP00000000631/1-584 LEDHYHADVA YHNNIHAADV VQSTHVLLST PALEAVFTDL EILAAIFASA ENSTTRP00000005797/1-592 LEDHYHADVA YHNNIHAADV VQSTHVLLST PALEAVFTDL EILAAIFASA bmy_05498T0/1-545 LEDHYHADVA YHNNIHAADV VQSTHVLLST PALEAVFTDL EILAAIFASA BACU019120/1-542 LEDHYHADVA YHNNIHAADV VQSTHVLLST PALEAVFTDL EILAAIFASA 501 550 ENSP00000345502/1-809 IHDVDHPGVS NQFLINTNSE LALMYNDSSV LENHHLAVGF KLLQEENCDI ENSBTAP00000000631/1-584 IHDVDHPGVS NQFLINTNSE LALMYNDSSV LENHHLAVGF KLLQEENCDI ENSTTRP00000005797/1-592 IHDVDHPGVS NQFLINTNSE LALMYNDSSV LENHHLAVGF KLLQEENCDI bmy_05498T0/1-545 IHDVDHPGVS NQFLINTNSE LALMYNDSSV LENHHLAVGF KLLQEENCDI BACU019120/1-542 IHDVDHPGVS NQFLINTNSE LALMYNDSSV LENHHLAVGF KLLQEENCDI 551 600 ENSP00000345502/1-809 FQNLTKKQRQ SLRKMVIDIV LATDMSKHMN LLADLKTMVE TKKVTSSGVL ENSBTAP00000000631/1-584 FQNLTKKQRQ SLRKMVIDIV LATDMSKHMN LLADLKTMVE TKKVTSSGVL ENSTTRP00000005797/1-592 FQNLTKKQRQ SLRKMVIDIV LATDMSKHMN LLADLKTMVE TKKVTSSGVL bmy_05498T0/1-545 FQNLTKKQRQ SLRKMVIDI- ---------- ---------- ---------- BACU019120/1-542 FQNLTKKQRQ SLRKMVIDIV LATDMSKHMN LLADLKTMVE TKKVTSSGVL 601 650 ENSP00000345502/1-809 LLDNYSDRIQ VLQNMVHCAD LSNPTKPLQL YRQWTDRIME EFFRQGDRER ENSBTAP00000000631/1-584 LLDNYSDRIQ VLQNMVHCAD LSNPTKPLQL YRQWTDRIME EFFRQGDRER ENSTTRP00000005797/1-592 LLDNYSDRIQ VLQNMVHCAD VSNPTKPLQL YRQWTDRIME EFFRQGDRER bmy_05498T0/1-545 ---------- VLQNMVHCAD LSNPTKPLQL YRQWTDRIME EFFRQGDRER BACU019120/1-542 LLDNYSDRIQ VLQNMVHCAD LSNPTKPLQL YRQWTDRIME EFFRQGDRER 651 700 ENSP00000345502/1-809 ERGMEISPMC DKHNASVEKS QVGFIDYIVH PLWETWADLV HPDAQDILDT ENSBTAP00000000631/1-584 ERGMEISPMC DKHNASVEKS QVGFIDYIVH PLWETWADLV HPDAQDILDT ENSTTRP00000005797/1-592 ERGMEISPMC DKHNASVEKS QVGFIDYIVH PLWETWADLV HPDAQDILDT bmy_05498T0/1-545 ERGMEISPMC DKHNASVEKS QVGFIDYIVH PLWETWADLV HPDAQDILDT BACU019120/1-542 ERGMEISPMC DKHNASVEKS QVGFIDYIVH PLWETWADLV HPDAQDILDT 701 750 ENSP00000345502/1-809 LEDNREWYQS TIPQSPSPAP DDPEEGRQGQ TEKFQFELTL EEDGESDTEK ENSBTAP00000000631/1-584 LEDNREWYQS TIPQSPSPAP DDQEEGRQGQ TEKFQFELTL EEDGESDTEK ENSTTRP00000005797/1-592 LEDNREWYQS TIPQSPSPAP DDQEEGRQGQ TEKFQFELTL EEDGESDTEK bmy_05498T0/1-545 LEDNREWYQS TIPQSPSPAP DDQEEGRQGQ TEKFQFELTL EEDGESDTEK BACU019120/1-542 LEDNREWYQS TIPQSPSPAP DDQEEGRQGQ TEKFQFELTL EEDGESDTEK 751 800 ENSP00000345502/1-809 DSGSQVEEDT SCSDSKTLCT QDSESTEIPL DEQVEEEAVG -EEEESQPEA ENSBTAP00000000631/1-584 DSGSQVEEDT SCSDSKTLCT QDSESTEIPL DEQVEEEAVA --DEESQPEA ENSTTRP00000005797/1-592 DSGSQVEEDT SCSDSKTLCT QDSESTEIPL DEQAEEEAVG --EEESQPEA bmy_05498T0/1-545 DSGSQVEEDT SCSDSKTLCT QDSESTEIPL DEQAEEEAVG EEEEESQPEA BACU019120/1-542 DSGSQVEEDT SCSDSKTLCT QDSESTEIPL DEQAEEEAVG EEEEESQPEA 801 850 ENSP00000345502/1-809 CVIDDRSPDT ENSBTAP00000000631/1-584 CVIGDPSPDT ENSTTRP00000005797/1-592 CAIGDHSPDT bmy_05498T0/1-545 CAIGDHSPDT BACU019120/1-542 CAIGAHSPDT