KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:50 2014 Check: 00 .. Name: ENSTTRP00000002640/1-632 Len: 779 Check: 5229 Weight: 1.00 Name: ENSP00000353427/1-611 Len: 779 Check: 7859 Weight: 1.00 Name: ENSBTAP00000000648/1-598 Len: 779 Check: 2332 Weight: 1.00 Name: bmy_19456T0/1-596 Len: 779 Check: 604 Weight: 1.00 Name: BACU008044/1-779 Len: 779 Check: 6466 Weight: 1.00 // 1 50 ENSTTRP00000002640/1-632 ---------- ---------- ---------- ---------- ---------- ENSP00000353427/1-611 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000648/1-598 ---------- ---------- ---------- ---------- ---------- bmy_19456T0/1-596 ---------- ---------- ---------- ---------- ---------- BACU008044/1-779 TLLPTQGSGL RWKNLSQSPE QQRKVLTLEK EENQTFGFEI QTYGLHHREE 51 100 ENSTTRP00000002640/1-632 ---------- ---------L HCGQRPAPAP PWCGAFCQAP KARGMVVLFE ENSP00000353427/1-611 ---------- ---------- ---------- ---------- -----MWLAK ENSBTAP00000000648/1-598 ---------- ---------- ---------- ---------- ---------- bmy_19456T0/1-596 ---------- ---------- ---------- ---------- ---------- BACU008044/1-779 QRVEMVTFVC RVHESSPAQL AGLTPGDTIA SVNGLNVEGI RHREIVDIIK 101 150 ENSTTRP00000002640/1-632 DCWSIQR--- ---------- ---------- ---------- ---------- ENSP00000353427/1-611 ACWSIQS--- ---------- ---------- ---------- ---------- ENSBTAP00000000648/1-598 ---------- ---------- ---------- ---------- ---------- bmy_19456T0/1-596 ---------- ---------- ---------- ---------- ---------- BACU008044/1-779 ASGNVLRLET LYGTSIRKAE LEARLQYLKQ TLYEKWGEYR SLMVQEQRLV 151 200 ENSTTRP00000002640/1-632 ---------- ---------- ---------- EMPCIQAQYG TPASSPGP-- ENSP00000353427/1-611 ---------- ---------- ---------- EMPCIQAQYG TPAPSPGPRD ENSBTAP00000000648/1-598 ---------- ---------- ---------- -MPCIQAQYG TPAPSPGPRD bmy_19456T0/1-596 ---------- ---------- ---------- -MPCIQAQYG TPAPSPGPRD BACU008044/1-779 HGLVVKDPSI YDTLESLLKP PDKHTSWQSQ EMPCIQAQYG TPAPSPGPRD 201 250 ENSTTRP00000002640/1-632 ---GDPLTPE LSKPTMDLAS PEAAPAVPTA LPSFSTFMDG YTGEFDTFLY ENSP00000353427/1-611 HLASDPLTPE FIKPTMDLAS PEAAPAAPTA LPSFSTFMDG YTGEFDTFLY ENSBTAP00000000648/1-598 HLAGDLLTPE LSKPTMDLAS PEAAPAVPTA LPSFSTFMDG YTGEFDTFLY bmy_19456T0/1-596 HLTSDPLTPE LSKPTMDLAS PEAAPAVPTA LPSFSTFMDG YTGEFDTFLY BACU008044/1-779 HLTSDPLTPE LSKPTMDLAS PEAAPTVPTA LPSFSTFMDG YTGEFDTFLY 251 300 ENSTTRP00000002640/1-632 QLPGTAQPCS SASSSASSTS SSSATSPASA SFKFEDFQVF GCYPGTLSGP ENSP00000353427/1-611 QLPGTVQPCS SASSSASSTS SSSATSPASA SFKFEDFQVY GCYPGPLSGP ENSBTAP00000000648/1-598 QLSGTAQPCS SASSSASSTS SSSATSPASA SFKFEDFQVY GCYPGTLSGP bmy_19456T0/1-596 QLPGTAQPCS SASSSASSTS SSSATSPASA SFKFEDFQVY GCYPGTLSGP BACU008044/1-779 QLPGTAQPCS SASSSASSAS SSSATSPASA SFKFEDFQVY GCYPGTLSGP 301 350 ENSTTRP00000002640/1-632 LDETLSSSGS DYYGSPCSAP SPSTPSFQPP QLSPWDGSFG PFSPSQTYEG ENSP00000353427/1-611 VDEALSSSGS DYYGSPCSAP SPSTPSFQPP QLSPWDGSFG HFSPSQTYEG ENSBTAP00000000648/1-598 LDETLSSSGS DYYGSPCSAP SPSTPSFQPP QLSPWDGSFG PFSPSQTYEG bmy_19456T0/1-596 LDETLSSSGS DYYGSPCSAP SPSTPSFQPP QLSPWDGSFG PFSPSQTYEG BACU008044/1-779 LDETLSSSGS DYYGSPCSAP SPSTPSFQPP QLSPWDGSFG PFSPNQTYEG 351 400 ENSTTRP00000002640/1-632 MRAWTEQLPK ASGHPQPLTF FSFSPPPGPS PSLAQSPLRL FPSQAAHQVG ENSP00000353427/1-611 LRAWTEQLPK ASGPPQPPAF FSFSPPTGPS PSLAQSPLKL FPSQATHQLG ENSBTAP00000000648/1-598 LRAWTEQLPK ASGPPQPPAF FSFSPPPGPS PSLAPSPLKL FPSQAAHQLG bmy_19456T0/1-596 MRAWTEQLPK ASGPPQPPTF FSFSPPTGPS PSLAQSPLKL FPSQAAHQLG BACU008044/1-779 MRAWTEQLPK ASGPPQPPTF FSFSPPTGPS PSLAQSPLKL FPSQAAHQLG 401 450 ENSTTRP00000002640/1-632 EGESYSMPTA FPGLVPASSH LDGLGMVDAP VTPAKARSGA PGASEGRCAV ENSP00000353427/1-611 EGESYSMPTA FPGLAPTSPH LEGSGILDTP VTSTKARSGA PGGSEGRCAV ENSBTAP00000000648/1-598 EGESYSMQTA FPGLVPTSPH LDGSGRLDAP VTSAKARSGA PGGSEGRCAV bmy_19456T0/1-596 EGESYSMPTA FPGLVPASSH LDGLGMVDAP VTSAKARSGA PGGSEGRCAV BACU008044/1-779 EGESYSMPTA FPGLVPASSH LDGLGMVDAP MTSAKARSGA PGGSEGRCAV 451 500 ENSTTRP00000002640/1-632 CGDXXXXXXX XXXXXXXXXX XXXRTVQKNA KYICLANKDC PVDKIRRNRC ENSP00000353427/1-611 CGDNASCQHY GVRTCEGCKG FFKRTVQKNA KYICLANKDC PVDKRRRNRC ENSBTAP00000000648/1-598 CGDNASCQHY GVRTCEGCKG FFKRTVQKNA KYICLANKDC PVDKRRRNRC bmy_19456T0/1-596 CGDNASCQHY GVRTCEGCKG FFKRTVQKNA KYICLANKDC PVDKRRRNRC BACU008044/1-779 CGDNASCQHY GVRTCEGCKG FFKRTVQKNA KYICLANKDC PVDKRRRNRC 501 550 ENSTTRP00000002640/1-632 QFRRFQKCLA VGMLKEVVRT DSLKGRRGRL PSKPKQPPDA SRANLLTSLV ENSP00000353427/1-611 QFCRFQKCLA VGMVKEVVRT DSLKGRRGRL PSKPKQPPDA SPANLLTSLV ENSBTAP00000000648/1-598 QFCRFQKCLA VGMVKEVVRT DSLKGRRGRL PSKPKQPPET SPAHLLTSLV bmy_19456T0/1-596 QFCRFQKCLA VGMVKEVVRT DSLKGRRGRL PSKPKQPPDA SPVNLLTSLV BACU008044/1-779 QFCRFQKCLA VGMVKEVVRT DSLKGRRGRL PSKPKQPPDA SPANLLTSLV 551 600 ENSTTRP00000002640/1-632 RAHLDSGPST SKLDYSKFQE LVLPHFGKED AGDVQQFYDL LSGSLEVIRK ENSP00000353427/1-611 RAHLDSGPST AKLDYSKFQE LVLPHFGKED AGDVQQFYDL LSGSLEVIRK ENSBTAP00000000648/1-598 RAHLDSGPST SKLDYSKFQE LALPHFGKED AGDVQQFYDL LSGSLEVIRK bmy_19456T0/1-596 RAHLDSGPST SKLDYSK--E LVLPHFGKED AGDVQQFYNL LSGSLEVIRK BACU008044/1-779 RAHLDSGPST SKLDYSKFQE LVLPHFGKED AGDVQQFYDL LSGSLEVIRK 601 650 ENSTTRP00000002640/1-632 WAEKIPGFAE LSPGDQDLLL ESAFLELFIL RLAYRSKPAE GKLIFCSGLV ENSP00000353427/1-611 WAEKIPGFAE LSPADQDLLL ESAFLELFIL RLAYRSKPGE GKLIFCSGLV ENSBTAP00000000648/1-598 WAEKIPGFAE LSPGDQDLLL ESAFLELFIL RLAYRSKPAE GKLIFCSGLV bmy_19456T0/1-596 WAEKIPGFAE LSPGDQDLLL ESAFLELFIL RLAYRSKPAE GKLIFCSGLV BACU008044/1-779 WAEKIPGFAE LSPGDQDLLL ESAFLELFIL RLAYRSKPAE GKLIFCSGLV 651 700 ENSTTRP00000002640/1-632 LHRLQCARGF GDWIDSILAF SRSLHSLVVD VPAFACLSAL VLITDRHGLQ ENSP00000353427/1-611 LHRLQCARGF GDWIDSILAF SRSLHSLLVD VPAFACLSAL VLITDRHGLQ ENSBTAP00000000648/1-598 LHRLQCARGF GDWIDSILAF SRSLHSLVVD IPAFACLSAL VLITDRHGLQ bmy_19456T0/1-596 LHRLQCARGF GDWIDSILAF SRSLHSLVVD VPAFACLSAL VLITDRHGLQ BACU008044/1-779 LHRLQCARGF GDWIDSILAF SRSLHSLVVD VPAFACLSAL VLITDRHGLQ 701 750 ENSTTRP00000002640/1-632 EPCRVEELQN RIASCLKEHV SAEAGEPQPA SCLSRLLGKL PELRTLCTQG ENSP00000353427/1-611 EPRRVEELQN RIASCLKEHV AAVAGEPQPA SCLSRLLGKL PELRTLCTQG ENSBTAP00000000648/1-598 EPRRVEELQN RIASCLKEHV SAEAGEPQPA SCLSRLLGKL PELRTLCTQG bmy_19456T0/1-596 EPCRVEELQN RIASCLKEHV SAEAGEPQPA SCLSRLLGKL PELRTLCTQG BACU008044/1-779 EPCRVEELQN RIASCLKEHV SAEAGEPQPA SCLSRLLGKL PELRTLCTQG 751 800 ENSTTRP00000002640/1-632 LQRIFYLKLE DLVPPPPIVE KIFMDTLPF ENSP00000353427/1-611 LQRIFYLKLE DLVPPPPIID KIFMDTLPF ENSBTAP00000000648/1-598 LQRIFYLKLE DLVPPPPIVD KIFMDTLPF bmy_19456T0/1-596 LQRIFYLKLE DLVPPPPIVE KIFMDTLPF BACU008044/1-779 LQRIFYLKLE DLVPPPPIVE KIFMDTLPF