KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:51 2014 Check: 00 .. Name: ENSP00000393887/1-367 Len: 586 Check: 1189 Weight: 1.00 Name: ENSBTAP00000000673/1-359 Len: 586 Check: 6081 Weight: 1.00 Name: BACU016546/1-397 Len: 586 Check: 3122 Weight: 1.00 Name: bmy_11077T0/1-583 Len: 586 Check: 7888 Weight: 1.00 Name: ENSTTRP00000015958/1-367 Len: 586 Check: 3183 Weight: 1.00 // 1 50 ENSP00000393887/1-367 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000673/1-359 ---------- ---------- ---------- ---------- ---------- BACU016546/1-397 ---------- ---------- ---------- ---------- ---------- bmy_11077T0/1-583 MFAGGFFLEP EQKSSHILTQ FFHRLQQIKG LWTLHQSAFS SRAPGLGLKP ENSTTRP00000015958/1-367 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000393887/1-367 ---------- -----MKSLV LLLCLAQLWG CHSAPHGPGL IYRQPNCDDP ENSBTAP00000000673/1-359 ---------- -----MKSFV LLFCLAQLWG CHSIPLDPVA GYKEPACDDP BACU016546/1-397 ---------- -----MRSLV LLLCLAQLCG CHSVPHGPVL GYREPACDDP bmy_11077T0/1-583 PATRLPTCQD LSRATMKSLV LLLCLAQLCG CHSVPHGPIL GYREPACDDP ENSTTRP00000015958/1-367 ---------- -----MKCLV LLLCLAQLCA CRSVPHGPIP GYREPACDDP 101 150 ENSP00000393887/1-367 ETEEAALVAI DYINQNLPWG YKHTLNQIDE VKVWPQ---- ---------- ENSBTAP00000000673/1-359 DTEQAALAAV DYINKHLPRG YKHTLNQIDS VKVWPR---- ---------- BACU016546/1-397 ETEQAALAAV DYINRHLPHG YKHILNQIDS VKVWPR---- ---------- bmy_11077T0/1-583 ETEQAALAAV DYINKHLPHG YKHILNQIDS VKVWPRLPDT AQRDGCASIN ENSTTRP00000015958/1-367 ETEQAALAAV DYINKHLPHG YKHILNQIES VKVWPR---- ---------- 151 200 ENSP00000393887/1-367 ---------- ---------- ---------- ---------- ---QPSGELF ENSBTAP00000000673/1-359 ---------- ---------- ---------- ---------- ---RPTGEVY BACU016546/1-397 ---------- ---KGKENGE GRKVDVEKEG RSREKDEEDK RETRPTGEVF bmy_11077T0/1-583 QSKATPPSFL PLQQGVGSNP VGAHPWTRSA GSGCSLLHSL SPQRPTGEVF ENSTTRP00000015958/1-367 ---------- ---------- ---------- ---------- ---RPTGEVF 201 250 ENSP00000393887/1-367 EIEIDTLETT CHVLDPTPVA RCSVRQLKEH AVEGDCDFQL LKLDGKFSVV ENSBTAP00000000673/1-359 DIEIDTLETT CHVLDPTPLA NCSVRQQTQH AVEGDCDIHV LKQDGQFSVL BACU016546/1-397 DLEIDTLETT CHVLDPTPLA NCSVRQLKEH AVEGDCDFNV LKQDGQFSVL bmy_11077T0/1-583 DLEIDTLETT CHVLDPTPLA NCSVRQLKEH AVEGDCDFNV LKQDGQFSVL ENSTTRP00000015958/1-367 DLEIDTLETT CHVLDPTPLA NCSVRQLKEH AVERDCDFNV LKQDGEFSVL 251 300 ENSP00000393887/1-367 YAKCDSSP-- ---------- ---------- DSAEDVRKVC QDCPLLAPLN ENSBTAP00000000673/1-359 FTKCDSSP-- ---------- ---------- DSAEDVRKLC PDCPLLAPLN BACU016546/1-397 SAKCDSSP-- ---------- ---------- DSAEDVHKVC PDCPLLAPLN bmy_11077T0/1-583 SAKCDSSPER GQVPQRITAP SQVDFFALCA DSAEDVHKVC PDCPLLAPLN ENSTTRP00000015958/1-367 SAKCDSSP-- ---------- ---------- DSAEDVHKVC PDCPLLAPLN 301 350 ENSP00000393887/1-367 DTRVVHAAKA ALAAFNAQNN GSNFQLEEIS RAQLVPLPPS TYVEFTVSGT ENSBTAP00000000673/1-359 DSRVVHAVEV ALATFNAESN GSYLQLVEIS RAQFVPLPVS VSVEFAVAAT BACU016546/1-397 DSRVVHAVEA ALATFNAQKS GSYFQLVEIS RAQFVPLPAS VSVEFAVAAT bmy_11077T0/1-583 DSRVVHAVEA ALAAFNAQKN GSYFQLVEIS RAQFVPLPAS VSVEFAVAAT ENSTTRP00000015958/1-367 DSRVVHAVEA ALAAFNAQKN GSYFQLVEIS RAQFVPLSAS VTVEFAVAAT 351 400 ENSP00000393887/1-367 DCVAKEATEA AKCNLLAEKQ YGFCKATLSE K-LGGAEVAV TCMVFQT--- ENSBTAP00000000673/1-359 DCIAKEVVDP TKCNLLAEKQ YGFCKGSVIQ KALGGEDVRV TCTLFQT--- BACU016546/1-397 DCVAKEVVDP AKCNLLAEKQ YGFCKGMVTE NVAGGEDVAV TCTVFQT--- bmy_11077T0/1-583 DCVAKEVVDP AKCNLLAEKQ YGFCKGTVTE KVAGGEDVAV TCTVFQTQCK ENSTTRP00000015958/1-367 DCVAKEVVDP AKCNLLAEKQ YGFCKGTVTE KVAGGEDVAV TCTVFQT--- 401 450 ENSP00000393887/1-367 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000673/1-359 ---------- ---------- ---------- ---------- ---------- BACU016546/1-397 ---------- ---------- ---------- ---------- ---------- bmy_11077T0/1-583 STIPNTTGEK GATAGQLPLP WSPDDHPLYL GSSFLPDSLQ IKISTVRELG ENSTTRP00000015958/1-367 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000393887/1-367 ---------- ---------Q PVSSQPQPEG ANEAVPTPVV DPDAPPSPPL ENSBTAP00000000673/1-359 ---------- ---------Q PVIPQPQPDG AEAEAPSAVP DAAGPTPSAA BACU016546/1-397 ---------- ---------Q PVLPQPQPDG AEAGPLTPAQ GSAAPALSPA bmy_11077T0/1-583 GVPPGRKRKA ANLRKRSSLQ PVLPQPQPDG TEAGPLTPAQ GSAGPALSPA ENSTTRP00000015958/1-367 ---------- ---------Q PVLPQPQPDG AEAGPLTAAP GSAGPALSPA 501 550 ENSP00000393887/1-367 GAPGLPPAGS PPDSHVLLAA PPGHQLHRAH YDLRHTFMGV VSLGSPSGEV ENSBTAP00000000673/1-359 GPPVASVVVG PSVVAVPL-- -P---LHRAH YDLRHTFSGV ASVESSSGEA BACU016546/1-397 GLPAASLVVG PRAVAAPPIP PP---VHPAH YDLRHAFSGV ASVESASGET bmy_11077T0/1-583 GLPAASLVVG PRAVAAPPIP PP---VHPAH YDLRHVFSGV ASVESASGEA ENSTTRP00000015958/1-367 GQPAASLVVG PRAVAAPPMP PP---EYPAH YDLRHAFSGV ASVESASGEA 551 600 ENSP00000393887/1-367 SHPRKTRTVV QPSVGAAAGP --VVPPCPGR IRHFKV ENSBTAP00000000673/1-359 FHVGKTPIVG QPSIPG--GP ---VRLCPGR IRYFKI BACU016546/1-397 FHVGKTPKVA QPSVPAPEGP VPVVRPCPGR IRYFNI bmy_11077T0/1-583 FHVGKTPKVA QPSVPAPEGP VPVVRPCPGR IRYFKI ENSTTRP00000015958/1-367 FHVGKTPKVA QPSIPAPEGP VPVVRPCPGR IRHFKV