KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:53 2014 Check: 00 .. Name: ENSTTRP00000012987/1-507 Len: 521 Check: 2855 Weight: 1.00 Name: BACU015702/1-495 Len: 521 Check: 3800 Weight: 1.00 Name: ENSP00000397947/1-519 Len: 521 Check: 1198 Weight: 1.00 Name: bmy_16609T0/1-376 Len: 521 Check: 6991 Weight: 1.00 Name: ENSBTAP00000000679/1-520 Len: 521 Check: 2115 Weight: 1.00 // 1 50 ENSTTRP00000012987/1-507 MEGVLYKWTN YLSGWQPRWF LLCGGILSYY DSPEDAWKGC KGSIQMAVCE BACU015702/1-495 MEGVLYKWTN YLSGWQPRWF LLCGGILSYY DSPEDAWKGC KGSIQMAVCE ENSP00000397947/1-519 MEGVLYKWTN YLSGWQPRWF LLCGGILSYY DSPEDAWKGC KGSIQMAVCE bmy_16609T0/1-376 MEGVLYKWTN YLSGWQPRWF LLCGGILSYY DSPEDAWKGC KGSIQMAVCE ENSBTAP00000000679/1-520 MEGVLYKWTN YLSGWQPRWF LLCGGILSYY DSPEDAWKGC KGSIQMAVCE 51 100 ENSTTRP00000012987/1-507 IQVHSVDNTR MDLIIPGEQY FYLKARSVAE RQRWLVALGS AKACLTDSRT BACU015702/1-495 IQVHSVDNTR MDLIIPGEQY FYLKARSVAE RQRWLVALGS AKACLTDSRT ENSP00000397947/1-519 IQVHSVDNTR MDLIIPGEQY FYLKARSVAE RQRWLVALGS AKACLTDSRT bmy_16609T0/1-376 IQ-------- ---------- ---------- ---------- ---------- ENSBTAP00000000679/1-520 IQVHSVDNTR MDLIIPGEQY FYLKARSVAE RQRWLVALGS AKACLTDSRT 101 150 ENSTTRP00000012987/1-507 QKEKEFAENT ENLKTKMSEL RLYCDLLVQQ VDKTKEVTAT GVSNSEEGID BACU015702/1-495 QKEKEFAENT ENLKTKMSEL RLYCDLLVQQ VDKTKEVTAP GVSNSEEGID ENSP00000397947/1-519 QKEKEFAENT ENLKTKMSEL RLYCDLLVQQ VDKTKEVTTT GVSNSEEGID bmy_16609T0/1-376 ----EFAENT ENLKTKMSEL RLYCDLLVQQ VDKTKEVTAT GVSTSEEGID ENSBTAP00000000679/1-520 QKEKEFAENT ENLKTKMSEL RLYCDLLVQQ VDKTKEVTTT GVSSSEEGID 151 200 ENSTTRP00000012987/1-507 VGTLLKSTCN TFLKTLEECM QIANAAFTSE LLYRTPPGSP QLAMLKSNKM BACU015702/1-495 VGTLLKSTCN TFLKTLEECM QIANAAFTSE LLYRTPPGSP QLAMLKSNKM ENSP00000397947/1-519 VGTLLKSTCN TFLKTLEECM QIANAAFTSE LLYRTPPGSP QLAMLKSSKM bmy_16609T0/1-376 VGTLLKSTCN TFLKTLEECM QIANXAFTSE LLYRTPPGSP QLAMLKSNKM ENSBTAP00000000679/1-520 VGTLLKSTCN TFLKTLEECM QIANAAFTSE LLYRTPPGSP QLAMLKSNKM 201 250 ENSTTRP00000012987/1-507 KHPIVPIHNS LERQTELNSC ENGSLHMEIN DDEEILMKNK SSLCLKPAET BACU015702/1-495 KHPIVPIHNS LERQTELNSC ENGSLSMEIN DDEEILMKKK SSLCLKPAET ENSP00000397947/1-519 KHPIIPIHNS LERQMELSTC ENGSLNMEIN GEEEILMKNK NSLYLKSAEI bmy_16609T0/1-376 KHPIVPIHNS LERQTELNSY ENGSLNMDIN DDEEILMKNK SSLCLKPAET ENSBTAP00000000679/1-520 KHPIVPIHNS LERQMELNSC ENGSLNMEIN DDEEILVRNK SSLCLKPAET 251 300 ENSTTRP00000012987/1-507 DRSISSEENT DDNITXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU015702/1-495 DRSISSEENT DDNITVQSEM IKEDGEENLG NHDSHLAQSE SHSSSSSPEA ENSP00000397947/1-519 DCSISSEENT DDNITVQGEI RKEDGMENLK NHDNNLTQSG SDS-SCSPEC bmy_16609T0/1-376 DRNISSEENT DDNITVQSEM IKEDGEENLG NHDSHLXQSE SHSSSSSPEA ENSBTAP00000000679/1-520 DCSISSEENT DDNITVQGEM MKENGEESLG NHDSDLAQPE LHSTSSSPES 301 350 ENSTTRP00000012987/1-507 -XXXXXXXXX XXXXXXXXXF SDIELLEDSG IPTEAFLASC YAVVPVLDKL BACU015702/1-495 HWEEGQEVIP TFFSTMNASF SDIELLEDSG IPTEAFLASC YAVVPVLDKL ENSP00000397947/1-519 LWEEGKEVIP TFFSTMNTSF SDIELLEDSG IPTEAFLASC YAVVPVLDKL bmy_16609T0/1-376 HWEEGQEVIP TFFSTMNT-- ---------- ---------- ---------- ENSBTAP00000000679/1-520 HWEEDQEVIP TFFSTMNTSF SDIELLEDSG IPTEAFLASC YAVVPVLDKL 351 400 ENSTTRP00000012987/1-507 GPTVFAPVKM DLVGNIKKVN QKYITNKEEF TTLQKIVLHE VEADVAQVRN BACU015702/1-495 GPTVFAPVKM DLVGNIKKVN QKYITNKEEF TTLQKIVLHE VEADVAQVRN ENSP00000397947/1-519 GPTVFAPVKM DLVGNIKKVN QKYITNKEEF TTLQKIVLHE VEADVAQVRN bmy_16609T0/1-376 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000679/1-520 GPTVFAPVKM DLVGNIKKVN QKYITNKEEF TTLQKIVLHE VEADVAQVRN 401 450 ENSTTRP00000012987/1-507 SATEALLWLK RGLKFLKGFL TEVKNGEKDI QTALNNAYGK TLRQHHGWVV BACU015702/1-495 SATEALLWLK RGLKFLKGFL TEVKNGEKDI QTALNNAYGK TLRQHHGWVV ENSP00000397947/1-519 SATEALLWLK RGLKFLKGFL TEVKNGEKDI QTALNNAYGK TLRQHHGWVV bmy_16609T0/1-376 ---------- RGLKFLKGFL TEVKNGEKDI QTALNNAYGK TLRQHHGWVV ENSBTAP00000000679/1-520 SATEALLWLK RGLKFLKGFL TEVKNGEKDI QTALNNAYGK TLRQHHGWVV 451 500 ENSTTRP00000012987/1-507 RGVFALA-LR AAPSYEDFVA ALTIKEGDHQ KAAFSVGMQR DLSLYLPAME BACU015702/1-495 RGVFAVPRSR IALIPRNYSH NLELEHLPCT RCCF------ ---------- ENSP00000397947/1-519 RGVFALA-LR AAPSYEDFVA ALTVKEGDHQ KEAFSIGMQR DLSLYLPAME bmy_16609T0/1-376 RGVFALA-LR AAPSYEDFVA ALTIKEGDHQ KAAFSVGMQR DLSLYLPAME ENSBTAP00000000679/1-520 RGVFALA-LR AAPSYEDFVA ALTIKEGDHQ KAAFSVGMQR DLSLYLPAME 501 550 ENSTTRP00000012987/1-507 KQLAILDTL- ---------- - BACU015702/1-495 KCFTYIKLLI S--------- - ENSP00000397947/1-519 KQLAILDTLY EVHGLESDEV V bmy_16609T0/1-376 KQLAILDTLY EVHGLESDEV V ENSBTAP00000000679/1-520 KQLAILDTLY EVHGLESDEV V