KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:56 2014 Check: 00 .. Name: ENSP00000340494/1-513 Len: 534 Check: 4703 Weight: 1.00 Name: ENSBTAP00000000697/1-518 Len: 534 Check: 1278 Weight: 1.00 Name: ENSTTRP00000005569/1-499 Len: 534 Check: 7041 Weight: 1.00 Name: bmy_05839T0/1-500 Len: 534 Check: 8474 Weight: 1.00 Name: BACU015270/1-517 Len: 534 Check: 8617 Weight: 1.00 // 1 50 ENSP00000340494/1-513 ---------- -------MAS VLSRRLGKRS LLGARVLGPS ASEGPSAAPP ENSBTAP00000000697/1-518 MEKKTLKQRK MERKGNSMAS VLSRRLGKRS LLGARVLGP- ----PGAAPP ENSTTRP00000005569/1-499 ---------- -------MAS VLSRRLGKRS LLGARVLGP- ----PGAAPP bmy_05839T0/1-500 ---------- -------MAS VLSRRLGKRS LLGARVLGP- ----PGAAPP BACU015270/1-517 MEKTTLKQRK MERKGSSMAS VLSRRLGKRS LLGARVLGP- ----PGAAPP 51 100 ENSP00000340494/1-513 SEP---LLEG AAPQPFTTSD DTPCQEQPKE VLKAPSTSGL QQVAFQPGQK ENSBTAP00000000697/1-518 SEPQAELLEG AAPQPFVASK DASCQEQPKE VLKAPGTSGL QLVAFHPGQK ENSTTRP00000005569/1-499 LEPQPELLEG AAPQPFLASK DTSCQEQPKE LLKAPGTSGL QQVAFQPGQK bmy_05839T0/1-500 LEPQAELLEG AAPQPFLASK DMSCQEQPKE LLKAPGTSGL HQVAFQPGQK BACU015270/1-517 LEPQVELLEG AAPQPFLASK DTSCQEQPKE LLKAPGTSGL QQVAFQPGQK 101 150 ENSP00000340494/1-513 VYVWYGGQEC TGLVEQHSWM EGQVTVWLLE QKLQVCCRVE EVWLAELQGP ENSBTAP00000000697/1-518 VCVWYGGQES TGLVEQHSWA EDKVTVWLLD QKSQICCKAE EVWLAEPPGR ENSTTRP00000005569/1-499 VCVWYGGQEC TGLVERHSWA EDKVTVWLLD QKLQICCKVE EVWPAELQSP bmy_05839T0/1-500 VCVWYGGQEC TGLVERHSWA EDKVTVWLLD QKLQICCKAE EVWPAELQSP BACU015270/1-517 VCVWYGGQEC TGLVERHSWA EDKVTVWLLD QKLQICCKAE EVWPAELQSP 151 200 ENSP00000340494/1-513 CPQAPPLEPG AQALAYRPVS RNIDVPKRKS DAVEMDEMMA AMVLTSLSCS ENSBTAP00000000697/1-518 IPQVPPPEQG TQAPAYRPVS RNIDVPKRKS DAVEMDEMMA AMVLTSLSCS ENSTTRP00000005569/1-499 IPQAPPPEQG TQAPAYRPVS RNIDVPKRKS DAVEMDEMMA AMVLTSLSCS bmy_05839T0/1-500 IPQAPPPEQG TQXPAYRPVS RNIDVPKRKS DAVEMDEMMA AMVLTSLSCS BACU015270/1-517 IPQAPPPEQG TQAPAYRPVS RNIDVPKRKS DAVEMDEMMA AMVLTSLSCS 201 250 ENSP00000340494/1-513 PVVQSPPGTE ANFSASRAAC DPWKESGDIS DSGSSTTSGH WSGSSGVSTP ENSBTAP00000000697/1-518 PVVQSPPGAE ANFSASRTAC DPWKESGDVS DSGSSTTSGH WSGSSGVSTP ENSTTRP00000005569/1-499 PVVQSPPGVE TNFSASRAAC DPWKESGDVS DSGSSTTSGH WSGSSGVSTP bmy_05839T0/1-500 PVVQSPPGVE TNFSASRAAC DPWKESGDVS DSGSSTTSGH WSGSSGVSTP BACU015270/1-517 PVVQSPPGVE TNFSASRAAC DPWKESGDVS DSGSSTTSGH WSGSSGVSTP 251 300 ENSP00000340494/1-513 SPPHPQASPK YLGDAFGSPQ TDHGFETDPD PFLLDEPAPR KRKNSVKVMY ENSBTAP00000000697/1-518 SPPHPQASPK YLGDAFGSPQ TDNGFETDPD AFLLDEPAPR KRKNSVKVMY ENSTTRP00000005569/1-499 SPPHPQASPK YLGDAFGSPQ TDNGFETDPD AFLLDEPAPR KRKNSVKVMY bmy_05839T0/1-500 SPPHPQASPK YLGDAFGSPQ TDNGFETDPD AFLLDEPAPR KRKNSVKVMY BACU015270/1-517 SPPHPQASPK YLGDAFGSPQ TDNGFETDPD AFLLDEPAPR KRKNSVKVMY 301 350 ENSP00000340494/1-513 KCLWPNCGKV LRSIVGIKRH VKALHLGDTV DSDQFKREED FYYTEVQLKE ENSBTAP00000000697/1-518 KCLWPSCGKV LRSIVGIKRH VKALHLGDTV DSDQFKREED FYYTEVQMKG ENSTTRP00000005569/1-499 KCLWPNCGKV LRSIVGIKRH VKALHLGDTV DSDQFKREED FYYTEVQMKE bmy_05839T0/1-500 KCLWPNCGKV LRSIVGIKRH VKALHLGDSV DYGQFKREED FYYTEVQTKE BACU015270/1-517 KCLWPNCGKV LRSIVGIKRH VKALHLGDSV DSGQFKREED FYYTEVQTKE 351 400 ENSP00000340494/1-513 ESAAAAAAAA AGTPVPGTPT SEPAPTPSMT GLPLSAL-PP PLHKAQSSGP ENSBTAP00000000697/1-518 EAAAA----- ------GVPT ADSAPTPSMT SPPLTILPPP PPPKAQSSGP ENSTTRP00000005569/1-499 EATAA----- -------AAT VDPAPTPSVT SPPLAVL-PP PPPKAQSSGP bmy_05839T0/1-500 EAAAA----- ------GGPA ADPAPSPSLT SPPLAVL-PP PPPKAQSSGP BACU015270/1-517 EAAAA----- ------GGPA ADPAPSPSLT SPPLAIL-PP PPPKAQSSGP 401 450 ENSP00000340494/1-513 EHPGPESSLP SGALSKSAPG SFWHIQADHA YQALPSFQIP VSPHIYTSVS ENSBTAP00000000697/1-518 DHPGLESYLP SGALSKSAPG SFWHIQADHA YQALPPFQIP VSPHIYTSIS ENSTTRP00000005569/1-499 DHPGLESYLP SGALSKSAPG SFWHIQADHA YQALPSFQIP VSPHIYTSIS bmy_05839T0/1-500 DHPGLESYLP SGALSKSAPG SFWHIQADHA YQALPSFQIP VSPHIYTSIS BACU015270/1-517 DHPGLESYLP SGALSKSAPG SFWHIQADHA YQALPSFQIP VSPHIYTSIS 451 500 ENSP00000340494/1-513 WAAAPSAACS LSPVRSRSLS FSEPQQPAPA MKSHLIVTSP PRAQSGARKA ENSBTAP00000000697/1-518 WAAAPSSTSS LSPVRSRSLS FSEPQQPPPA MKSHLIVTSP PRAQSTTRKA ENSTTRP00000005569/1-499 WAAAPSTASS LSPVRSRSLS FSEPQQPPPA MKSHLIVTSS PRAQSSTRKA bmy_05839T0/1-500 WAAAPSTASS LSPVRSRSLS FSEPQQPPPA MKSHLIVTSS PRAQSSTRKA BACU015270/1-517 WAAAPSAASS LSPVRSRSLS FSEPQQPPPA MKSHLIVTSS PRAQSSTRKA 501 550 ENSP00000340494/1-513 RGEAKKCRKV YGIEHRDQWC TACRWKKACQ RFLD ENSBTAP00000000697/1-518 RGEAKKCRKV YGIEHRDQWC TACRWKKACQ RFLD ENSTTRP00000005569/1-499 RGEAKKCRKV YGIEHRDQWC TACRWKKACQ RFLD bmy_05839T0/1-500 RGEAKKCRKV YGIEHRDQWC TACRWKKACQ RFLD BACU015270/1-517 RGEAKKCRKV YGIEHRDQWC TACRWKKACQ RFLD