KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:56 2014 Check: 00 .. Name: bmy_06124T0/1-189 Len: 367 Check: 6615 Weight: 1.00 Name: ENSP00000304923/1-367 Len: 367 Check: 8795 Weight: 1.00 Name: ENSBTAP00000000700/1-367 Len: 367 Check: 6086 Weight: 1.00 Name: BACU014445/1-320 Len: 367 Check: 3360 Weight: 1.00 Name: ENSTTRP00000005642/1-367 Len: 367 Check: 7026 Weight: 1.00 // 1 50 bmy_06124T0/1-189 ---------- ---------- ---------- ---------- ---MNMVLKT ENSP00000304923/1-367 MASELCKTIS VARLEKHKNL FLNYRNLHHF PLELLKDEGL QYLERLYMKR ENSBTAP00000000700/1-367 MASELCKTIS VARLEKHKNL FLNYRNLQHF PLELLKDEGL QYLERLYMKR BACU014445/1-320 ---------- ---------- ---------- ---------- -------MKR ENSTTRP00000005642/1-367 MASELCKTIS VARLEKHKNL FLNYRNLQHF PLELLKDEGL QYLERLYMKR 51 100 bmy_06124T0/1-189 SSYHEL---- -KKLTG---- YLHSNNIVVV PEAIGSLVKL QCLDLSDNAL ENSP00000304923/1-367 NSLTSLPENL AQKLPNLVEL YLHSNNIVVV PEAIGSLVKL QCLDLSDNAL ENSBTAP00000000700/1-367 NSLTTLPENL AQKLPNLVEL YLHSNNIVVV PEAIGSLVKL QCLDLSDNAL BACU014445/1-320 NSLTTLPENL AQKLPNLVEL YLHSNNIVVV PEAIGSLVKL QCLDLSDNAL ENSTTRP00000005642/1-367 NSLTTLPENL AQKLPNLVEL YLHSNNIVVV PEAIGSLVKL QCLDLSDNAL 101 150 bmy_06124T0/1-189 EIVCPEIGRL RALRHLRLAN NQLQFLPPEV GDLKELQTLD ISTNRLLTLP ENSP00000304923/1-367 EIVCPEIGRL RALRHLRLAN NQLQFLPPEV GDLKELQTLD ISTNRLLTLP ENSBTAP00000000700/1-367 EIVCPEIGRL RALRHLRLAN NQLQFLPPEV GDLKELQTLD ISTNRLLTLP BACU014445/1-320 EIVCPEIGRL RALRHLRLAN NQLQFLPPEV GDLKELQTLD ISTNRLLTLP ENSTTRP00000005642/1-367 EIVCPEIGHL RALRHLRLAN NQLQFLPPEV GDLKELQTLD ISTNRLLTLP 151 200 bmy_06124T0/1-189 ERLHLCLSLQ YLTVDRNRLW NYSTFLSN-- ---------- ------PDLG ENSP00000304923/1-367 ERLHMCLSLQ YLTVDRNRLW YVPRHLCQLP SLNELSMAGN RLAFLPLDLG ENSBTAP00000000700/1-367 ERLHLCLSLQ YLTVDRNRLW CVPRHLCQLP SLNELSMAGN RLAFLPLDLG BACU014445/1-320 ERLHLCLSLQ YLTVDRNRLW CVPRHLCQLP SLNELSMAGN RLAFLPLDLG ENSTTRP00000005642/1-367 ERLHLCLSLQ YLTVDRNRLW CVPRHLCQLP SLNELSMAGN RLAFLPLDLG 201 250 bmy_06124T0/1-189 RSRELQYVYV DNNIHLKGLP SYLYNKVIGC SGSGLSVS-- --NLVTQKSP ENSP00000304923/1-367 RSRELQYVYV DNNIHLKGLP SYLYNKVIGC SGCGAPIQVS EVKLLSFSSG ENSBTAP00000000700/1-367 RSRELQYVYV DNNIHLKGLP SFLYNKVIGC SGCGAPIQVS EVKLLSFSSG BACU014445/1-320 RSRELQYVYV DNNIHLKGLP SYLYNKVIGC SGCGAPIQVS EVKLLSFSSG ENSTTRP00000005642/1-367 RSRELQYVYV DNNIHLKGLP SYLYNKVIGC SGCGAPIQVS EVKLLSFSSG 251 300 bmy_06124T0/1-189 GAAAL----- ---------- -PLGA----- ---------- ----LSPV-- ENSP00000304923/1-367 QRTVFLPAEV KAIGTEHDHV LPLQELAMRG LYHTYHSLLK DLNFLSPISL ENSBTAP00000000700/1-367 QLTVFLPAEV KAIGTEKDHI LPLQELAMRT LHHTYHASLK DLDFLSPVSL BACU014445/1-320 QLTVFLPAEV KAIGTEKDHV LPLQELAMRS LHHTYHSFLK DLDFLSPISL ENSTTRP00000005642/1-367 QLTVFLPAEV KAIGTEKDHV LPLQELAMRS LHHTYHSFLK DLDFLSPVSL 301 350 bmy_06124T0/1-189 ---------- ---------- ---------- ---------- ---------- ENSP00000304923/1-367 PRSLLELLHC PLGHCHRCSE PMFTIVYPKL FPLRETPMAG LHQWKTTVSF ENSBTAP00000000700/1-367 PRSLLELLHC PLGHCHRCSE PMFTIVYPKL FPLRETPMAG LHQGRTTVSF BACU014445/1-320 PRSLLELLHC PLGHCHRCSE PMFTIVYPKL FPLRETPMAG LHQGRTTVSF ENSTTRP00000005642/1-367 PRSLLELLHC PLGHCHRCSE PMFTIVYPKL FPLRETPMAG LHQGRTTVSF 351 400 bmy_06124T0/1-189 ---------- ------- ENSP00000304923/1-367 VAYCCSTQCL QTFDLLS ENSBTAP00000000700/1-367 VAYCCSTQCL QTFDLLS BACU014445/1-320 VAYCCSTQCL QTFDLLS ENSTTRP00000005642/1-367 VAYCCSTQCL QTFDLLS