KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:11:57 2014 Check: 00 .. Name: ENSTTRP00000008997/1-394 Len: 402 Check: 5727 Weight: 1.00 Name: ENSP00000346879/1-401 Len: 402 Check: 1141 Weight: 1.00 Name: bmy_03850T0/1-366 Len: 402 Check: 615 Weight: 1.00 Name: ENSBTAP00000000704/1-370 Len: 402 Check: 6895 Weight: 1.00 // 1 50 ENSTTRP00000008997/1-394 MWSGGGGKAR GWEAAAGGRT SPGRLSRRRI MSMSPKHTTP FSVSDILSPL ENSP00000346879/1-401 MWSGGSGKAR GWEAAAGGRS SPGRLSRRRI MSMSPKHTTP FSVSDILSPL bmy_03850T0/1-366 ---------- ---------- ---------- MSMSPKHTTP FSVSDILSPL ENSBTAP00000000704/1-370 ---------- ---------- ---------- MSMSPKHTTP FSVSDILSPL 51 100 ENSTTRP00000008997/1-394 EESYKKVGME GGGLGAPLAA YRQGQAAPPA AAMQQHAVGH HGAVTAAYHM ENSP00000346879/1-401 EESYKKVGME GGGLGAPLAA YRQGQAAPPT AAMQQHAVGH HGAVTAAYHM bmy_03850T0/1-366 EESYKKVGME GGGLGAPLAA YRQGQAAPPA AAMQQHAVGH HGAVTAAYHM ENSBTAP00000000704/1-370 EESYKKVGME GGGLGAPLAA YRQGQTAPPA AAMQQHAVGH HGAVTAAYHM 101 150 ENSTTRP00000008997/1-394 TAAGVPQLSH SAVGGYCNGN LGNMSELPPY QDTMRNSTSG PGWYGANPDP ENSP00000346879/1-401 TAAGVPQLSH SAVGGYCNGN LGNMSELPPY QDTMRNSASG PGWYGANPDP bmy_03850T0/1-366 TAAGVPQLSH SAVGGYCNGN LGNMSELPPY QDTMRNSTSG PGWYGANPDP ENSBTAP00000000704/1-370 TAAAVPQLSH SAVGGYCNGN LGNMSELPPY QDTMRNSASG PGWYGANPDP 151 200 ENSTTRP00000008997/1-394 RFPAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXKRRVL-SQ ENSP00000346879/1-401 RFPAISRFMG PASGMNMSGM GGLGSLGDVS KNMAPLPSAP RRKRRVLFSQ bmy_03850T0/1-366 RFPAISRFMG PASGMNMSGM GGLGSLGDVS KNMAPLPSAP RRKRRVLFSQ ENSBTAP00000000704/1-370 RFPAISRFMG PASGMNMSGM GGLGSLGDVS KNMAPLPSAP RRKRRVLFSQ 201 250 ENSTTRP00000008997/1-394 AQVYELERRF KQQKYLSAPE REHLASMIH- TPTQVKIWFQ NHRYKMKRQA ENSP00000346879/1-401 AQVYELERRF KQQKYLSAPE REHLASMIHL TPTQVKIWFQ NHRYKMKRQA bmy_03850T0/1-366 AQVYELERRF KQQKYLSAPE REHLASMIHL TPTQVKIWFQ NHRYKMKRQA ENSBTAP00000000704/1-370 AQVYELERRF KQQKYLSAPE REHLASMIHL TPTQVKIWFQ NHRYKMKRQA 251 300 ENSTTRP00000008997/1-394 KDKAAQQQLQ QDS----GGG GAGC--QQQQ AQQQSPRRVA VPVLVKDGKP ENSP00000346879/1-401 KDKAAQQQLQ QDSGGGGGGG GTGC-PQQQQ AQQQSPRRVA VPVLVKDGKP bmy_03850T0/1-366 KDKAAQQQLQ QDS----GGG GAGC--QQQQ AQQQSPRRVA VPVLVKDGKP ENSBTAP00000000704/1-370 KDKAAQQQLQ QDS--GGGGG GAGCQQQQQQ AQQQSPRRVA VPVLVKDGKP 301 350 ENSTTRP00000008997/1-394 CQAGAPAPGA ASLQGHAQQQ AQQQAQAAQA AAAAISVGSG GPGLGAHPGH ENSP00000346879/1-401 CQAGAPAPGA ASLQGHAQQQ AQHQAQAAQA AAAAISVGSG GAGLGAHPGH bmy_03850T0/1-366 CQAGAPAPGA ASLQGHAQQQ AQQQAQAAQA AAAAISVGSG GPGLGAHPGH ENSBTAP00000000704/1-370 CQAGAPAPGA TSLQGHAQQQ AQQQAQAAQA AAAAISVGSG GPGLGAHPGH 351 400 ENSTTRP00000008997/1-394 QPGSAGQSPD LAHHATSPAA LQGQVSSLSH LNSSGSDYGT MSCSTLLYGR ENSP00000346879/1-401 QPGSAGQSPD LAHHAASPAA LQGQVSSLSH LNSSGSDYGT MSCSTLLYGR bmy_03850T0/1-366 QPGSAGQSPD LAHHATSPAA LQGQVSSLSH LNSSGSDYGT MSCSTLLYGR ENSBTAP00000000704/1-370 QPGSAGQSPD LAHHAASPAA LQGQVSSLPH LNSSGSDYGT MSCSTLLYGR 401 450 ENSTTRP00000008997/1-394 TW ENSP00000346879/1-401 TW bmy_03850T0/1-366 TW ENSBTAP00000000704/1-370 TW