KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:11:58 2014 Check: 00 ..
Name: ENSTTRP00000007470/1-238 Len: 263 Check: 8959 Weight: 1.00
Name: ENSP00000358616/1-238 Len: 263 Check: 4267 Weight: 1.00
Name: bmy_02804T0/1-263 Len: 263 Check: 396 Weight: 1.00
Name: BACU004635/1-238 Len: 263 Check: 3894 Weight: 1.00
Name: ENSBTAP00000000722/1-238 Len: 263 Check: 3894 Weight: 1.00
//
1 50
ENSTTRP00000007470/1-238 ---------- ---------- -----MSEDL AKQLASYKAQ LQQVEAALSG
ENSP00000358616/1-238 ---------- ---------- -----MSEDL AKQLASYKAQ LQQVEAALSG
bmy_02804T0/1-263 MLIGRVWLVH QRAPGPYLAS RSIRWMSEDL AKQLASYKAQ LQQVEAALSG
BACU004635/1-238 ---------- ---------- -----MSEDL AKQLASYKAQ LQQVEAALSG
ENSBTAP00000000722/1-238 ---------- ---------- -----MSEDL AKQLASYKAQ LQQVEAALSG
51 100
ENSTTRP00000007470/1-238 NGENEDLLKL KKDLQXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000358616/1-238 NGENEDLLKL KKDLQEVIEL TKDLLSTQPS ETLASSDSFA STQPTHSWKV
bmy_02804T0/1-263 NGENEDLLKL KKDLQEVIEL TKDLLSTQPS ETLASSDNFA STQPTHSWKV
BACU004635/1-238 NGENEDLLKL KKDLQEVIEL TKDLLSTQPS ETLASSDNFA STQPTHSWKV
ENSBTAP00000000722/1-238 NGENEDLLKL KKDLQEVIEL TKDLLSTQPS ETLASSDNFA STQPTHSWKV
101 150
ENSTTRP00000007470/1-238 XXXXXXXXXX XXXCYEAEIE EIDEENGTAA ITFAGYGNAE VTPLLNLKPV
ENSP00000358616/1-238 GDKCMAVWSE DGQCYEAEIE EIDEENGTAA ITFAGYGNAE VTPLLNLKPV
bmy_02804T0/1-263 GDKCMAIWSE DGQCYEAEIE EIDEENGTAA ITFAGYGNAE VTPLLNLKPV
BACU004635/1-238 GDKCMAIWSE DGQCYEAEIE EIDEENGTAA ITFAGYGNAE VTPLLNLKPV
ENSBTAP00000000722/1-238 GDKCMAIWSE DGQCYEAEIE EIDEENGTAA ITFAGYGNAE VTPLLNLKPV
151 200
ENSTTRP00000007470/1-238 EEGRKAKEDS GNKPMSKKEM IAQQREYKKK KALKKAQRIK ELEQEREDQK
ENSP00000358616/1-238 EEGRKAKEDS GNKPMSKKEM IAQQREYKKK KALKKAQRIK ELEQEREDQK
bmy_02804T0/1-263 EEGRKAKEDS GNKPMSKKEM IAQQREYKKK KALKKAQRIK ELEQEREDQK
BACU004635/1-238 EEGRKAKEDS GNKPMSKKEM IAQQREYKKK KALKKAQRIK ELEQEREDQK
ENSBTAP00000000722/1-238 EEGRKAKEDS GNKPMSKKEM IAQQREYKKK KALKKAQRIK ELEQEREDQK
201 250
ENSTTRP00000007470/1-238 VKWQQFNNRA YSKNKKGQVK RSIFASPESV TGKVGVGTCG IADKPMTQYQ
ENSP00000358616/1-238 VKWQQFNNRA YSKNKKGQVK RSIFASPESV TGKVGVGTCG IADKPMTQYQ
bmy_02804T0/1-263 VKWQQFNNRA YSKNKKGQVK RSIFASPESV TGKVGVGTCG IADKPMTQYQ
BACU004635/1-238 VKWQQFNNRA YSKNKKGQVK RSIFASPESV TGKVGVGTCG IADKPMTQYQ
ENSBTAP00000000722/1-238 VKWQQFNNRA YSKNKKGQVK RSIFASPESV TGKVGVGTCG IADKPMTQYQ
251 300
ENSTTRP00000007470/1-238 DTSKYNVRHL MPQ
ENSP00000358616/1-238 DTSKYNVRHL MPQ
bmy_02804T0/1-263 DTSKYNVRHL MPQ
BACU004635/1-238 DTSKYNVRHL MPQ
ENSBTAP00000000722/1-238 DTSKYNVRHL MPQ