KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:00 2014 Check: 00 .. Name: ENSP00000309477/1-889 Len: 927 Check: 5259 Weight: 1.00 Name: bmy_19673T0/1-887 Len: 927 Check: 4928 Weight: 1.00 Name: ENSBTAP00000000731/1-889 Len: 927 Check: 9031 Weight: 1.00 Name: ENSTTRP00000016108/1-892 Len: 927 Check: 6727 Weight: 1.00 Name: BACU006643/1-922 Len: 927 Check: 9786 Weight: 1.00 // 1 50 ENSP00000309477/1-889 ---------- ---------- ---------- ---MSNPFAH LAEPLDPVQP bmy_19673T0/1-887 ---------- ---------M FSVLFRDTWP SGIMSNPFAH LAEPLDPAQP ENSBTAP00000000731/1-889 ---------- ---------- ---------- ---MSNPFAH LVEPLDPAQP ENSTTRP00000016108/1-892 ---------- ---------- ---------- ---MSNPFAH LAEPLDPAQP BACU006643/1-922 MVGCCRVGDP HSEKGLRTGL NEERMRDTWP SGIMSNPFAH LAEPLDPAQP 51 100 ENSP00000309477/1-889 GKKFFNLNKL EDSRYGRLPF SIRVLLEAAI RNCDEFLVKK QDIENILHWN bmy_19673T0/1-887 GKKFFNLNKL EDSRYGRLPF SIRVLLEAAI RNCDQFLVKK NDVENILNWN ENSBTAP00000000731/1-889 GKKFFNLNKL EDSRYGSLPF SIRVLLEAAI RNCDQFLVKK NDVENILNWK ENSTTRP00000016108/1-892 GKKFFNLNKL EDSRYGRLPF SIRVLLEAAI RNCDQFLVKK NDVENILNWN BACU006643/1-922 GKKFFNLNKL EDSRYGRLPF SIRVLLEAAI RNCDQFLVKK NDVENILNWN 101 150 ENSP00000309477/1-889 VTQHKNIEVP FKPARVILQD FTGVPAVVDF AAMRDAVKKL GGDPEKINPV bmy_19673T0/1-887 VMQHKNIEVP FKPARVILQD FTGVPAVVDF AAMRDAVKKL GGNPEKINPV ENSBTAP00000000731/1-889 VMQHKNIEVP FKPARVILQD FTGVPAVVDF AAMRDAVKKL GGNPEKINPI ENSTTRP00000016108/1-892 VMQHKNIEVP FKPARVILQD FTGVPAVVDF AAMRDAVKKL GGNPEKINPV BACU006643/1-922 VMQHKNIEVP FKPARVILQD FTGVPAVVDF AAMRDAVKKL GGNPEKINPI 151 200 ENSP00000309477/1-889 CPADLVIDHS IQVDFNRRAD SLQKNQDLEF ERNRERFEFL KWGSQAFHNM bmy_19673T0/1-887 CPADLVIDHS IQVDFNRRAD SLQKNQDLEF ERNRERFEFL KWGSQAFRNM ENSBTAP00000000731/1-889 CPADLVIDHS IQVDFNRRAD SLKKNQDLEF ERNKERFEFL KWGSQAFHNM ENSTTRP00000016108/1-892 CPADLVIDHS IQVDFNRRAD SLQKNQDLEF ERNRERFEFL KWGSLAFRNM BACU006643/1-922 CPADLVIDHS IQVDFNRRAD SLQKNQDLEF ERNRERFEFL KWGSQAFRNM 201 250 ENSP00000309477/1-889 RIIPPGSGII HQVNLEYLAR VVFDQDGYYY PDSLVGTDSH TTMIDGLGIL bmy_19673T0/1-887 RIIPPGSGII HQVNLEYLAR VVFDQDGYYY PDSLVGTDSH TTMIDGLGVL ENSBTAP00000000731/1-889 RIIPPGSGII HQVNLEYLAR VVFDQDGYYY PDSLVGTDSH TTMIDGLGVL ENSTTRP00000016108/1-892 RIIPPGSGII HQVNLEYLAR VVFDQDGYYY PDSLVGTDSH TTMIDGLGVL BACU006643/1-922 RIIPPGSGII HQVNLEYLAR VVFDQDGYYY PDSLVGTDSH TTMIDGLGVL 251 300 ENSP00000309477/1-889 GWGVGGIEAE AVMLGQPISM VLPQVIGYRL MGKPHPLVTS TDIVLTITKH bmy_19673T0/1-887 GWGVGGIEAE AVMLGQPISM VLPQVIGYRL MGNPHPLVTS TDIVLTITKH ENSBTAP00000000731/1-889 GWGVGGIEAE AVMLGQPISM VLPQVIGYRL VGNPHPLVTS TDIVLTITKH ENSTTRP00000016108/1-892 GWGVGGIEAE AVMLGQPISM VLPQVIGYRL MGNPHPLVTS TDIVLTITKH BACU006643/1-922 GWGVGGIEAE AVMLGQPISM VLPQVIGYRL MGNPHPLVTS TDIVLTITKH 301 350 ENSP00000309477/1-889 LRQVGVVGKF VEFFGPGVAQ LSIADRATIA NMCPEYGATA AFFPVDEVSI bmy_19673T0/1-887 LRQVGVVGKF VEFFGPGVAQ LSIADRATIA NMCPEYGATA AFFPVDEVSI ENSBTAP00000000731/1-889 LRQVGVVGKF VEFFGPGVAQ LSIADRATIA NMCPEYGATA AFFPVDEVSI ENSTTRP00000016108/1-892 LRQVGVVGKF VEFFGPGVAQ LSIADRATIA NMCPEYGATA AFFPVDEVSI BACU006643/1-922 LRQVGVVGKF VEFFGPGVAQ LSIADRATIA NMCPEYGATA AFFPVDEVSI 351 400 ENSP00000309477/1-889 TYLVQTGRDE EKLKYIKKYL QAVGMFRDFN DPSQDPDFTQ VVELDLKTVV bmy_19673T0/1-887 KYLVQTGRDE EKVKHIKKYL QAVGMFRNFS DPSQDPDFAQ VVELDLKTVV ENSBTAP00000000731/1-889 KYLVQTGRDK EKVKHIKQYL QVVGMFRDFS DSSQDPDFAQ VVELDLKTVV ENSTTRP00000016108/1-892 KYLVQTGRDE EKVKHIKKYL QAVGMFRDFS DSAQDPDFAQ VVELDLKTVV BACU006643/1-922 KYLVQTGRDE EKVKHIKKYL QAVGMFRNFS DPFQDPDFAQ VVELDLKTVV 401 450 ENSP00000309477/1-889 PCCSGPKRPQ DKVAVSDMKK DFESCLGAKQ GFKGFQVAPE HHNDHKTFIY bmy_19673T0/1-887 PCCSGPKRPQ DKVAVSDMKK DFESCLGAKQ GFKGFQVALD HHNDHKTFIY ENSBTAP00000000731/1-889 PCCSGPKRPQ DKVAVSDMKK DFESCLGAKQ GFKGFQVAPD HHNDHKTFIY ENSTTRP00000016108/1-892 PCCSGPKRPQ DKVAVSDMKK DFESCLGAKQ GFKGFQVALD HHNDHKTFIY BACU006643/1-922 PCCSGPKRPQ DKVAVSDMKK DFESCLGAKQ GFKGFQVALD HHNDHKTFIY 451 500 ENSP00000309477/1-889 DNTEFTLAHG SVVIAAITSC TNTSNPSVML GAGLLAKKAV DAGLNVMPYI bmy_19673T0/1-887 NNSEFTLAHG SVVIAAITSC TNTSNPSVML GAGLLAKKAV DAGLNVKPYI ENSBTAP00000000731/1-889 NNSKFTLAHG SVVIAAITSC TNTSNPSVML GAGLLAKKAV DAGLSVKPYI ENSTTRP00000016108/1-892 NNSEFTLAHG SVVIAAITSC TNTSNPSVML GAGLLAKKAV DAGLNVKPYI BACU006643/1-922 NNSEFTLAHG SVVIAAITSC TNTSNPSVML GAGLLAKKAV DAGLNVKPYI 501 550 ENSP00000309477/1-889 KTSLSPGSGV VTYYLQESGV MPYLSQLGFD VVGYGCMTCI GNSGPLPEPV bmy_19673T0/1-887 KTSLSPGSGV VTYYLRESGV MPYLSQLGFD VVGYGCMTCI GNSGPLPDAV ENSBTAP00000000731/1-889 KTSLSPGSGV VTYYLRESGV MPYLSQLGFD VVGYGCMTCI GNSGPLPEAV ENSTTRP00000016108/1-892 KTSLSPGSGV VTYYLRESGV MPYLSQLGFD VVGYGCMTCI GNSGPLPEAV BACU006643/1-922 KTSLSPGSGV VTYYLRESGV MPYLSQLGFD VVGYGCMTCI GNSGPLPDAV 551 600 ENSP00000309477/1-889 VEAITQGDLV AVGVLSGNRN FEGRVHPNTR ANYLASPPLV IAYAIAGTIR bmy_19673T0/1-887 VEAITQGDLV AVGVLSGNRN FEGRVHPNTR ANYLASPPLV IAYAIAGTIR ENSBTAP00000000731/1-889 VEAIVQGDLV AVGVLSGNRN FEGRVHPNTR ANYLASPPLV IAYAIAGTIR ENSTTRP00000016108/1-892 VEAITQGDLV AVGVLSGNRN FEGRVHPNTR ANYLASPPLV IAYAIAGTIR BACU006643/1-922 VEAITQGDLV AVGVLSGNRN FEGRVHPNTR ANYLASPPLV IAYAIAGTIR 601 650 ENSP00000309477/1-889 IDFEKEPLGV NAKGQQVFLK DIWPTRDEIQ AVERQYVIPG MFKEVYQKIE bmy_19673T0/1-887 IDFEKEPLGV NAKGQQVFLR DIWPTRDEIQ AVERQYVIPG MFKEVYQKIE ENSBTAP00000000731/1-889 IDFEKEPLGV NAKGQQVFLK DIWPTRDEIQ AVERQYVIPG MFKEVYQKIE ENSTTRP00000016108/1-892 IDFEKEPLGV NAKGQQVFLR DIWPTRDEIQ AVERQYVIPG MFKEVYQKIE BACU006643/1-922 IDFEKEPLGV NAKGQQVFLR DIWPTRDEIQ AVERQYVIPG MFKEVYQKIE 651 700 ENSP00000309477/1-889 TVNESWNALA TPSDKLFFWN SKSTYIKSPP FFENLTLDLQ PPKSIVDAYV bmy_19673T0/1-887 TVNESWNALA APSDELYYWN PKSTYIKSPP FFEDLTLHPQ PPKSIVDAYV ENSBTAP00000000731/1-889 TVNESWNALA APSDKLYCWN PKSTYIKSPP FFEDLTLDLQ PPKSIVDAYV ENSTTRP00000016108/1-892 TVNESWNALA APSDKLYYWN PKSTYIKSPP FFEDLTLDLR PPKSIVDAYV BACU006643/1-922 TVNESWNALA APSDELYYWN PKSTYIKSPP FFEDLTLDPQ PPKSIVDAYV 701 750 ENSP00000309477/1-889 LLNLGDSVTT DHISPAGNIA RNSPAARYLT NRGLTPREFN SYGSRRGNDA bmy_19673T0/1-887 LLNLGDSVTT DHISPAGNIA RNSPAARYLT NRGLTPREFN SYGSRRGNDA ENSBTAP00000000731/1-889 LLNLGDSVTT DHISPAGNIA RNSPAARYLT NRGLTPREFN SYGSRRGNDA ENSTTRP00000016108/1-892 LLNLGDSVTT DHISPAGNIA RNSPAARYLT NRGLTPREFN SYGSRRGNDA BACU006643/1-922 LLNLGDSVTT DHISPAGNIA RNSPAARYLT NRGLTPREFN SYGSRRGNDA 751 800 ENSP00000309477/1-889 VMARGTFANI RLLNRFLNKQ APQTIHLPSG EILDVFDAAE RYQQAGLPLI bmy_19673T0/1-887 IMARGTFANI RLLNKFLNKQ APQTIYLPTG EILDVFDASE RYQQAGLPLI ENSBTAP00000000731/1-889 IMARGTFANI RLLNKFLNKQ APQTIHLPSG EILDVFDAAE RYQQAGLPLI ENSTTRP00000016108/1-892 IMARGTFANI RLLNKFLNKQ APQTIHLPTG EILDVFDASE RYQQAGLPLI BACU006643/1-922 IMARGTFANI RLLNKFLNKQ APQTIYLPTG EILDVFDASE RYQQAGLPLI 801 850 ENSP00000309477/1-889 VLAGKEYGAG SSRDWAAKGP FLLGIKAVLA ESYERIHRSN LVGMGVIPLE bmy_19673T0/1-887 VLAGKEYGSG SSRDWAAKGP FLLGIRAVLA ESYERIHRSN LVGMGVIPLE ENSBTAP00000000731/1-889 VLAGKEYGSG SSRDWAAKGP FLLGIRAVLA ESYERIHRSN LVGMGVIPLE ENSTTRP00000016108/1-892 VLAGKEYGS- SSRD-AAKGP FLLGIRAVLA ESYERIHRSN LVGMGVIPLE BACU006643/1-922 VLAGKEYGSG SSRDWAAKGP FLLGIRAVLA ESYERIHRSN LVGMGVIPLE 851 900 ENSP00000309477/1-889 YLPGENADAL GLTGQERYTI IIPENLKPQM KVQVKLDTGK TFQAVMRFDT bmy_19673T0/1-887 YLPGENADTL GLTGRERYTI SIPETLKPRM KVQVKVSRRL SMP------- ENSBTAP00000000731/1-889 YLPGENADTL GLTGRERYTI SIPETLKPRM KVQIKLDTGK TFQAVMRFDT ENSTTRP00000016108/1-892 YLPGENADTL GLTGRERYTI SIPETLKPRM KVQVKLDTGK TFQAVMRFDT BACU006643/1-922 YLPGENADTL GLTGRERYTI SIPETLKPRM KVQVKLHTGK TFQAVMRFDT 901 950 ENSP00000309477/1-889 DVELTYFLNG GILNYMIRKM AK----- bmy_19673T0/1-887 ---------G PVQRPCVPHQ SC----- ENSBTAP00000000731/1-889 DVELTYFHNG GILNYMIRKM TK----- ENSTTRP00000016108/1-892 DVELTYFHNG GILNYMIRKM AKALVSS BACU006643/1-922 DVELTYFHNG GILNYMIRKM AK-----