KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:12:03 2014 Check: 00 .. Name: ENSP00000373828/1-674 Len: 749 Check: 9736 Weight: 1.00 Name: ENSBTAP00000000741/1-677 Len: 749 Check: 8891 Weight: 1.00 Name: ENSTTRP00000011373/1-617 Len: 749 Check: 1485 Weight: 1.00 Name: bmy_01916T0/1-693 Len: 749 Check: 844 Weight: 1.00 // 1 50 ENSP00000373828/1-674 MSELADSGPS -GASAPSQLR AVTLEDLGLL LAGGLASPEP LSLEELSERY ENSBTAP00000000741/1-677 LVEWTDSSPS SEASPPSQLS TVAPEDLG-L LEEELASPEP LSPEEVSEKD ENSTTRP00000011373/1-617 LVELSDSNLS LGTSPPSQPG TITPEDLELL LEDGLASSEP LSLEESSERY bmy_01916T0/1-693 ---PADSNPS SGTSPPSQLG TITPEDLELL LEEGLASSEP LSLEEISERY 51 100 ENSP00000373828/1-674 ESSHPTSTAS VPEQDTAKHW NQLEQWVVEL QAEVACLREH KQRCERATRS ENSBTAP00000000741/1-677 ACSRLQSEAS DLEQGTLKRW KQLEQWVADL QAEVASLRGH RARCEHATLS ENSTTRP00000011373/1-617 ESSCLPSTAS VPERDTPKHW KQLEHWVADL HE--VSLRGH KACCERTTLS bmy_01916T0/1-693 ESICLPSTAS VTEQDAPKRW KQLEQWVADL QAEVVSLRGH KACCERTTLS 101 150 ENSP00000373828/1-674 LLRELLQVRA RVQLQGSELR QLQQ------ ---------- --EARPAAQA ENSBTAP00000000741/1-677 LLRELLQVRA CLQLQDTQLK RLQL------ ---------- --ETRRVAPA ENSTTRP00000011373/1-617 LLQELLQVHT CLQLQDSELK RLQQ------ ---------- ------AAQA bmy_01916T0/1-693 LLRELLQFPS -LQNQN-QMQ TLDKRCPCTL GAGLTGGRGA LGKQRLLPGQ 151 200 ENSP00000373828/1-674 PEKEAPEF-- --------SG L--QNQMQAL DKRLVEVREA LTRLRRRQVQ ENSBTAP00000000741/1-677 PEKEAVQL-- --------PG PQQQNQMQAL DKRLVEVREA LTQIRRKQAL ENSTTRP00000011373/1-617 PEKEALQF-- --------PS LQIQNQMQAL DKRLVEVREA LTQIRRKQAL bmy_01916T0/1-693 PGHQPLAFVA SNLVSCSGGG RAGPRQKQLL CARLVEIREA LTQIRRKQAL 201 250 ENSP00000373828/1-674 QEAERRGAEQ EAGLRLAKLT DLLQQEEQGR EVACGALQKN QEDSSRRVDL ENSBTAP00000000741/1-677 QDSERKGAEQ EASLRLSELT GKLKQEEQDR EMACGALQKS QEEAGQKVDH ENSTTRP00000011373/1-617 QDCERKGAEQ EASLWLSELT EKLKQEERDR KVACGALQKS QEEASQRVDH bmy_01916T0/1-693 QDSERKGAEQ EARLRLSELT EKLKQEERDR EVTCGALQKS QEEASQRVDH 251 300 ENSP00000373828/1-674 EVARMQAQVT KLGEEVSLRF LKREAKLCGF LQKSFLALEK ---------- ENSBTAP00000000741/1-677 EVARMQAQMT KLGEEMSLRF LKREARLCGF LQKSFLALEK ---------- ENSTTRP00000011373/1-617 EVARMQAQMT KLREEMSLRF LKREAKLCSF LQKSFLALEK ---------- bmy_01916T0/1-693 EVARMQAQMT KLREEMSLRF LKREAKLCSF LQKSFLALEK VGACRQQGNQ 301 350 ENSP00000373828/1-674 ---------- ----RMKASE SSRLKLEGSL RGELESRWEK LRGLMEERLR ENSBTAP00000000741/1-677 ---------- ----RMKASE SARLRAESAL REELEGRWRQ LQELDTERVR ENSTTRP00000011373/1-617 ---------- ----RMKASE SAWLPPESGL WEELESQWQQ LQELDAECTW bmy_01916T0/1-693 SPSPQLTAGG VSPQRMKASE SARLRAESSL REELESKWQQ LRELDAERTR 351 400 ENSP00000373828/1-674 ALQGQHEVGP GGRR--AEES HLLEQCQGLD AAVAQLTKFV QQNQASLNRV ENSBTAP00000000741/1-677 ALQGQCQ-AP STRQ--QEEC HLLEQCRGLD KAVVQLTEFV QQNQVSLNRV ENSTTRP00000011373/1-617 ALQGQRQVGH SGHQTEQEEC HLLEQRRGLD KAVVQLTEFV RQNQASLSHI bmy_01916T0/1-693 ALQGQRQ--- ------QEEC HLLEQCRGLD KAVVQLTEFV RQNQASLSHV 401 450 ENSP00000373828/1-674 LLAEEKAW-- ---------D AKGRLEESRA GELAAYVQEN LEAAQLAGEL ENSBTAP00000000741/1-677 LLAEQKAW-- ---------D AKGQLEDSRA GELATYLQEN LEAMQLAGEL ENSTTRP00000011373/1-617 LLAEQKAW-- ---------D AKGKLENSRA GELATYLQEN LETMQLASKL bmy_01916T0/1-693 LLAEQKAWWV SERGLRQGRD AKGQLENSRV GELATYLQES LEAMQLASEL 451 500 ENSP00000373828/1-674 ARQEMHGELV LLREKSRALE ASVAQLAGQL KELSGHLPAL SSRLDLQEQM ENSBTAP00000000741/1-677 AQQETQGALE LLREKSQALE VSVAELVRQV KDLSDHFLAL SWRLDLQEQT ENSTTRP00000011373/1-617 AQQEMYSALE LL-EKSQALE VSVAELVRQV KDMSDHFLAL SWRLDLQEQT bmy_01916T0/1-693 AQQEMHSALE LLREKSQALE VSVAELVRQV KDMSDHFLAL SWRLDLQEQT 501 550 ENSP00000373828/1-674 LGLRLSEAKT EWEGAERKSL EDLARWRKEV TEHLRGVREK VDGLPQQIES ENSBTAP00000000741/1-677 LSMRLRETQS EWEVAEQRWR EGLTRCREEA EAHLREVQER VDQLPQQIEA ENSTTRP00000011373/1-617 LSLRLCEAQS EWGVAEQRWR EALARCREEA EA-LREVQQR VDSLPRQIEA bmy_01916T0/1-693 LSLRLCEVQS EWGVAEQRWR EGLARCREEA EAHLREVQQR VNILPQEIEA 551 600 ENSP00000373828/1-674 VSDKCLLHKS DSDLRISAEG KAREFKVGAL RQELATLLSS VQLLKEDNPG ENSBTAP00000000741/1-677 VTDKCVLHKS DSDCKISAEA TARELAVEAV RQELAALLSS VQLLREGNPG ENSTTRP00000011373/1-617 IADTCILHKS DSDFKIPAEA KA-------- -NQMMKLESS IQY------- bmy_01916T0/1-693 VADRCILHKS DSDLKISAEA KAREFEGEAV RQELAALLSS VQLLREGNPG 601 650 ENSP00000373828/1-674 RKIAEMQGKL ATNQIMKLEN CVQANKTIQN LRFNTEARLR TQEMATLWES ENSBTAP00000000741/1-677 RKIAEIQGKL ATNQMMKLET SIQDNKTIQN LKFNTETKLR TEAMATLQES ENSTTRP00000011373/1-617 ---------- ---------- -----KTIQN LKFNTETKRR TEEMATPLSS bmy_01916T0/1-693 RKIAEIQGKL AT-------- ---------- ---------R TEEMATLRSS 651 700 ENSP00000373828/1-674 VLRLWSEEGP RTP-LGSWKA LPSLVRPRVF IKDMAPGKVV PMNCWGVYQA ENSBTAP00000000741/1-677 VLRLWSEEGP WTPTLSSRRG PMSLGRQQLF IKDVAPDDVV PMNRWGVYQA ENSTTRP00000011373/1-617 VMHLWSEGGP LVT-LGSRRV LMSLVRQQFF IKDVAPDEVV PMNHWGMYQA bmy_01916T0/1-693 VMHLWSEEGP WALTLGSRRV LMSLVRQQFF IKDVAPDKVV PVNHWGVYQA 701 750 ENSP00000373828/1-674 VRWLRWKASL IKLRAL---- --RRPGGVLE KPHSQEQVQQ LTPSLFIQK ENSBTAP00000000741/1-677 VRWLQWKAAL VNLAARQMSR SAALEKPLVQ KPARQL---S SLP-IPQK- ENSTTRP00000011373/1-617 VAA------- --VEGG---- --PHEAGGLA EAKGGL---G EAPRLEAR- bmy_01916T0/1-693 VRW------- --AAGSRLPE PPPGPGSGLG GPRGQWAKAG SGP------