KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:04 2014 Check: 00 .. Name: ENSTTRP00000013376/1-601 Len: 601 Check: 3531 Weight: 1.00 Name: BACU015893/1-507 Len: 601 Check: 941 Weight: 1.00 Name: bmy_03145T0/1-530 Len: 601 Check: 4237 Weight: 1.00 Name: ENSP00000379282/1-558 Len: 601 Check: 4556 Weight: 1.00 Name: ENSBTAP00000000755/1-558 Len: 601 Check: 5919 Weight: 1.00 // 1 50 ENSTTRP00000013376/1-601 ISQLRARRSR YVLTSRARNT LGSGRAGPAG GPAAERAAPR AGAMAKLLSC BACU015893/1-507 ---------- ---------- ---------- ---------- ---MAKLLSC bmy_03145T0/1-530 ---------- ---------- ---------- ---------- ---MAKLLSC ENSP00000379282/1-558 ---------- ---------- ---------- ---------- ---MAKLLSC ENSBTAP00000000755/1-558 ---------- ---------- ---------- ---------- ---MAKLLSC 51 100 ENSTTRP00000013376/1-601 VLGPRLYKIY RERDSERAPS SVPGTPTSVT NPPSSSWDTY YQPRALEKHA BACU015893/1-507 VLGPRLYKIY RERDSERAPS SVPGTPTSVT NPPSSSWDTY YQPRALEKHA bmy_03145T0/1-530 VLGPRLYKIY RERDSERAPS SVPGTPTSVT NPPSSSWDTY YQPRALEKHA ENSP00000379282/1-558 VLGPRLYKIY RERDSERAPA SVPETPTAVT APHSSSWDTY YQPRALEKHA ENSBTAP00000000755/1-558 VLGPRLYKIY RERDSERAPS SVPGTPTSVT NPHSSSWDTY YQPRALEKHA 101 150 ENSTTRP00000013376/1-601 DSILALASVF WSISYYSSPF AFFYLYRKGY LSLSKVVPLS HYAGTLLLLL BACU015893/1-507 DSILALLPIL ------SPP- ---------- ---------- ---------- bmy_03145T0/1-530 DSILALASVF WSISYYSSPF AFFYLYRKGY LSLSKVVPFS HYAGTLLLLL ENSP00000379282/1-558 DSILALASVF WSISYYSSPF AFFYLYRKGY LSLSKVVPFS HYAGTLLLLL ENSBTAP00000000755/1-558 DSILALASVF WSISYYSSPF AFFYLYRKGY LSLSKVVPFS HYAGTLLLLL 151 200 ENSTTRP00000013376/1-601 AGVACLRGIG RWTNPQYRQF ITILEATHRN RSAENKRQLA KYNFDFGSWP BACU015893/1-507 -------GIG RWTNPQYRQF ITILEATHRN RSAENKRQLA NYNFDFRSWP bmy_03145T0/1-530 AGVACLRGIG RWTNPQYRQF ITILEATHRN RSAENKRQLA NYNFDFRSWP ENSP00000379282/1-558 AGVACLRGIG RWTNPQYRQF ITILEATHRN QSSENKRQLA NYNFDFRSWP ENSBTAP00000000755/1-558 AGVACLRGIG RWTNPQYRQF ITILEATHRN HSAENKRQLA NYNFDFRSWP 201 250 ENSTTRP00000013376/1-601 VDFHWEEPSS RKESRGGPSR WGVALLRPEP LHRGTADTFL NRVKKLPCQI BACU015893/1-507 VDFHWEEPSS RKESRGGPSR WGVALLRPEP LHRGTADTFL NRVKKLPCQI bmy_03145T0/1-530 VDFHWEEPSS RKESRGGPSR WGVALLRPEP LHRGTADTFL NRVKKLPCQI ENSP00000379282/1-558 VDFHWEEPSS RKESRGGPSR RGVALLRPEP LHRGTADTLL NRVKKLPCQI ENSBTAP00000000755/1-558 VDFHWEEPSS RKESRGGPSR RGVALLRPEP LHRGTADTFL NRVKKLPCQI 251 300 ENSTTRP00000013376/1-601 TSYLVAHTLG RRMLYPGSVY LLQKALMPVL LQGQARLVEE CNGRRAKLQA BACU015893/1-507 TSYLVAHTLG RRMLYPGSVY LLQKALMPVL LQGQARLVEE CNGRRAKLQA bmy_03145T0/1-530 TSYLVAHTLG RRMLYPGSVY LLQKALMPVL LQGQARLVEE CNGRRAKLQA ENSP00000379282/1-558 TSYLVAHTLG RRMLYPGSVY LLQKALMPVL LQGQARLVEE CNGRRAKLLA ENSBTAP00000000755/1-558 TSYLVAHTLG RRMLYPGSVY LLQKALMPVL LQGQARLVEE CHGRRAKLLA 301 350 ENSTTRP00000013376/1-601 CDGNEIDTMF VDRRGRAEPQ GQKLVICCEG NAGFYEVGCV STPLEAGYSV BACU015893/1-507 CDGNEIDTMF VDRRGRAEPQ GQKLVICCEG NAGFYEVGCV STPLEAGYSV bmy_03145T0/1-530 CDGNEIDTMF VDRRGRAEPQ GQKLVICCEG NAGFYEVGCI STPLEAGYSV ENSP00000379282/1-558 CDGNEIDTMF VDRRGTAEPQ GQKLVICCEG NAGFYEVGCV STPLEAGYSV ENSBTAP00000000755/1-558 CDGNEIDTMF VDRRGTAEPQ GQKLVICCEG NAGFYEVGCV STPLEAGYSV 351 400 ENSTTRP00000013376/1-601 LGWNHPGFAG STGVPFPQNE ANAMDVVVQF AIHRLGFQPQ DIIIYAWSIG BACU015893/1-507 LGWNHPGFAG STGVPFPQNE ANAMDVVVQF AIHRLGFQPQ DIIIYAWSIG bmy_03145T0/1-530 LGWNHPGFAG STGVPFPQNE ANAMDVVVQF AIHRLGFQPQ DIIIYAWSIG ENSP00000379282/1-558 LGWNHPGFAG STGVPFPQNE ANAMDVVVQF AIHRLGFQPQ DIIIYAWSIG ENSBTAP00000000755/1-558 LGWNHPGFAG STGVPFPQNE ANAMDVVVQF AIHRLGFQPE DIILYAWSIG 401 450 ENSTTRP00000013376/1-601 GFTATWAAMS YPDISAVILX XXXXXXXXXX XXXXXXXXXG LVTRTVRQHL BACU015893/1-507 GFTATWAAMS YPDISAVILD ASFDDLVPLA LKVMPDSWRG LVTRTVRQHL bmy_03145T0/1-530 GFTATWAAMS YPDISAVILD ASFDDLVPLA LKVMPDSWRG LVTRTVRQHL ENSP00000379282/1-558 GFTATWAAMS YPDVSAMILD ASFDDLVPLA LKVMPDSWRG LVTRTVRQHL ENSBTAP00000000755/1-558 GFTATWAAMS YPDISAVILD ASFDDLVPLA LKVMPDSWRG LVTRTVRQHL 451 500 ENSTTRP00000013376/1-601 NLNNAEQLCR YQGPVLLIRR TKDEIITTTV PEDIMSNRGN DLLLKLLQHR BACU015893/1-507 NLNNAEQLCR YQGPVLLIRR TKDEIITTT- ------ELGP DLLSRHSLHR bmy_03145T0/1-530 NLNNAEQLCR YQGPVLLIRR TKDEIITTTV PEDIMSNRGN DLLLKLLQHR ENSP00000379282/1-558 NLNNAEQLCR YQGPVLLIRR TKDEIITTTV PEDIMSNRGN DLLLKLLQHR ENSBTAP00000000755/1-558 NLNNAEQLCR YQGPVLLIRR TRDEIITTTV PEDIMSNRGN DLLLKFLQHR 501 550 ENSTTRP00000013376/1-601 YPRVMAEEGL QAVRQWLEAS SQLEEASIYS RWEVEEDWCL SVLQSYQAEH BACU015893/1-507 YPRVMAEEGL QVVRQWLEAS SQLEEASIYS RWEVEEDWCL SVLHSYQAEH bmy_03145T0/1-530 YPRVMAEEGL QVVRQWLEAS SQLEE----- ---------- -------GER ENSP00000379282/1-558 YPRVMAEEGL RVVRQWLEAS SQLEEASIYS RWEVEEDWCL SVLRSYQAEH ENSBTAP00000000755/1-558 YPRVMAEEGL RVVRQWLEAS SQLEEASIYS RWEVEEDWCL SVLRSYQAEH 551 600 ENSTTRP00000013376/1-601 GPEFPWSVGE DMSPEGRRQL ALFLAQKHLH NFEATHCTPL PAQNFQMPWH BACU015893/1-507 GPEFPWSVGE DMSPEGRRQL ALFLAQKHLH NFEATHCTPL PTQNFQMPWH bmy_03145T0/1-530 GS------GE DMSPEGRRQL ALFLAQKHLH NFEATHCTPL PAQNFQMPWH ENSP00000379282/1-558 GPDFPWSVGE DMSADGRRQL ALFLARKHLH NFEATHCTPL PAQNFQMPWH ENSBTAP00000000755/1-558 GPEFPWSVGE DMSADGRRQL ALFLAQKHLN NFEATHCTPL PTQNFQMPWH 601 650 ENSTTRP00000013376/1-601 L BACU015893/1-507 L bmy_03145T0/1-530 L ENSP00000379282/1-558 L ENSBTAP00000000755/1-558 L