KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:12 2014 Check: 00 .. Name: bmy_04749T0/1-301 Len: 552 Check: 8061 Weight: 1.00 Name: BACU016345/1-341 Len: 552 Check: 2024 Weight: 1.00 Name: ENSBTAP00000000780/1-356 Len: 552 Check: 7095 Weight: 1.00 Name: ENSP00000379353/1-356 Len: 552 Check: 7253 Weight: 1.00 Name: ENSTTRP00000013430/1-355 Len: 552 Check: 7367 Weight: 1.00 // 1 50 bmy_04749T0/1-301 ---------- ---------- ---------I VARLFCFGFL LEPLIPFDFL BACU016345/1-341 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000780/1-356 MSPCGRARRH TSRGAMAVLA WKFPRTRLPV GASALCV-VV LCWLYVFPVY ENSP00000379353/1-356 MSPCGRARRQ TSRGAMAVLA WKFPRTRLPM GASALCV-VV LCWLYIFPVY ENSTTRP00000013430/1-355 MSPCGRARRH TSRGAMAVLA WKFPRTRLPV GASALCV-VV LCWLYIFPVY 51 100 bmy_04749T0/1-301 RHPYVSQTV- ---------- ---------- -KLASCCDAV QNFIVSQNNT BACU016345/1-341 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000780/1-356 RLPDEKEIVQ GVLQQGTAWR RNRTAAGIFR KQMEDCCDPA HLFAMTKMNS ENSP00000379353/1-356 RLPNEKEIVQ GVLQQGTAWR RNQTAARAFR KQMEDCCDPA HLFAMTKMNS ENSTTRP00000013430/1-355 RLPNEKEIVQ GVLQQGTAWR RNQTAARVFR KQMEDCCDPA HLFAMTKMNS 101 150 bmy_04749T0/1-301 PVGTNMSYEV ESKSEIQIRE NIFDMLPVSQ PFVGYPYNQC AVVGNGGILN BACU016345/1-341 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000780/1-356 PMGKSLWYDG EFLYSFTIDN STYSLFPQAT PF-QLPLKKC AVVGNGGILK ENSP00000379353/1-356 PMGKSMWYDG EFLYSFTIDN STYSLFPQAT PF-QLPLKKC AVVGNGGILK ENSTTRP00000013430/1-355 PMGKSMWYDG EFLYSFTIDN STYSLFPQAT PF-QLPLKKC AVVGNGGILK 151 200 bmy_04749T0/1-301 QSLCGAXIDK SDFVFRCNLP PTTGNVTSDV GTKTNLVTLN PSIIRLRYGN BACU016345/1-341 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000780/1-356 KSGCGRQIDE ADFVMRCNLP PLSSEYTKDV GSKSHLVTAN PSIIRQRFQN ENSP00000379353/1-356 KSGCGRQIDE ANFVMRCNLP PLSSEYTKDV GSKSQLVTAN PSIIRQRFQN ENSTTRP00000013430/1-355 KSDCGRQIDE ANFVMRCNLP PLSSEYTKDV GS-SHLVTAN PSIFRQRFQN 201 250 bmy_04749T0/1-301 LKEKKAIFLE DVATYGDAFV LLPAFSFRAN TAASFKVYYT LKESKARQRV BACU016345/1-341 ---------- -MKVYNHSYI YMPAFSMKTG TEPSLRVYYT LSDVGANQTV ENSBTAP00000000780/1-356 LLWSRKTFVD HMKVYNHSYI YMPAFSMKTG TEPSLRVYYT LSDVGANQTV ENSP00000379353/1-356 LLWSRKTFVD NMKIYNHSYI YMPAFSMKTG TEPSLRVYYT LSDVGANQTV ENSTTRP00000013430/1-355 LLWSRKTFVD HMKVYNHSYI YMPAFSMKTG TEPSLRVYYT LSDVGANQTV 251 300 bmy_04749T0/1-301 LFFHPKYLKN LALFWRTKGV TEYRLSSGLM ITSVAVELCE NVKLYGFWPF BACU016345/1-341 LFANPNFLRS IGKFWKSRGI HAKRLSTGLF LVSAALGLCE EVAIYGFWPF ENSBTAP00000000780/1-356 LFANPNFLRS IGKFWKSRGI HAKRLSTGLF LVSAALGLCE EVAIYGFWPF ENSP00000379353/1-356 LFANPNFLRS IGKFWKSRGI HAKRLSTGLF LVSAALGLCE EVAIYGFWPF ENSTTRP00000013430/1-355 LFANPNFLRS IGKFWKSRGI HAKRLSTGLF LVSAALGLCE EVAIYGFWPF 301 350 bmy_04749T0/1-301 SKTGENTPVS HHYYDNKLPK RGFHEMPKEY RQILQLHVKG ILRLQFSR-- BACU016345/1-341 SVNMHEQPIS HHYYDNVLPF SGFHAMPEEF LQLWYLHKIG ALRMQLDPWP ENSBTAP00000000780/1-356 SVNMHEQPIS HHYYDNVLPF SGFHAMPEEF LQLWYLHKIG ALRMQLDP-- ENSP00000379353/1-356 SVNMHEQPIS HHYYDNVLPF SGFHAMPEEF LQLWYLHKIG ALRMQLDP-- ENSTTRP00000013430/1-355 SVNMHEQPIS HHYYDNVLPF SGFHAMPEEF LQLWYLHKIG ALRMQLDP-- 351 400 bmy_04749T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU016345/1-341 NVAAPICTLE PEAAGSLASL NTSPPSPTSR EVGAKNRAAR VRLGKGDKLV ENSBTAP00000000780/1-356 ---------- ---------- ---------- ---------- ---------- ENSP00000379353/1-356 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013430/1-355 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_04749T0/1-301 -CEIA----- ---------- ---------- ---------- ---------- BACU016345/1-341 TCEEAHAPHH ITHRKDWLSL HTAQVVVAAL LSRCPLGLNL PLLVPGTPHP ENSBTAP00000000780/1-356 -CEDNSLQ-- ---------- ---------- ---------- ---------P ENSP00000379353/1-356 -CEDTSLQ-- ---------- ---------- ---------- ---------P ENSTTRP00000013430/1-355 -CEDTSLP-- ---------- ---------- ---------- ---------P 451 500 bmy_04749T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU016345/1-341 TSFAKSWSTY PLSVKIFESL VRGHPLQEPL LTVPQMCPPL TQLTERRVSP ENSBTAP00000000780/1-356 TS-------- ---------- ---------- ---------- ---------- ENSP00000379353/1-356 TS-------- ---------- ---------- ---------- ---------- ENSTTRP00000013430/1-355 TS-------- ---------- ---------- ---------- ---------- 501 550 bmy_04749T0/1-301 ---------- ---------- ---------- ---------- ---------- BACU016345/1-341 SLLEPGSALG VSSPLGIMSR LLEGPKDANL AFRNGGNEEN LLLSTLNSRP ENSBTAP00000000780/1-356 ---------- ---------- ---------- ---------- ---------- ENSP00000379353/1-356 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013430/1-355 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_04749T0/1-301 -- BACU016345/1-341 KF ENSBTAP00000000780/1-356 -- ENSP00000379353/1-356 -- ENSTTRP00000013430/1-355 --