KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:16 2014 Check: 00 .. Name: bmy_12884T0/1-221 Len: 312 Check: 3088 Weight: 1.00 Name: ENSTTRP00000004496/1-265 Len: 312 Check: 4773 Weight: 1.00 Name: ENSP00000383376/1-312 Len: 312 Check: 5860 Weight: 1.00 Name: ENSBTAP00000000795/1-298 Len: 312 Check: 1275 Weight: 1.00 Name: BACU007597/1-312 Len: 312 Check: 2936 Weight: 1.00 // 1 50 bmy_12884T0/1-221 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004496/1-265 ---------- ---------- ---HKAYGFS ASKDHQVVTA IEYQEVILAC ENSP00000383376/1-312 MARRSRHRLL LLLLRYLVVA LGYHKAYGFS APKDQQVVTA VEYQEAILAC ENSBTAP00000000795/1-298 MARRSRHHLL LLLLRYLVVA LDYHKAYGFS ASKDHQVVTA IEYQEAILAC BACU007597/1-312 MARRSRHRLL LLLLHYLVVA LDYHKAYGFS ASKDNQVVTA IEYQEVILAC 51 100 bmy_12884T0/1-221 ---------- ---------- ---------- --------MI DFSIRIKNVT ENSTTRP00000004496/1-265 KYPKKTISSR LEWKKLGRSV SFVYYQQALQ GDFKDRAEMI DFSIRIKNVT ENSP00000383376/1-312 KTPKKTVSSR LEWKKLGRSV SFVYYQQTLQ GDFKNRAEMI DFNIRIKNVT ENSBTAP00000000795/1-298 KYPKKTVSSR LEWKKLGRGV SFVYYQQALQ GDFKDRAEMI DFSIRIKNVT BACU007597/1-312 KYPKKTISSR LEWKKLGHGV SFVYYQQALQ GDFKDRAEMI DFSIRIKNVT 101 150 bmy_12884T0/1-221 RNDAGKYRCE VSAPSEQGQN LEEDTLTLEV LVAPAVPSCE VPSSALRGTV ENSTTRP00000004496/1-265 RNDAGKYRCE VSAPSEQGQN LEEDTLTLEV LVAPAVPSCE VPSSALRGTV ENSP00000383376/1-312 RSDAGKYRCE VSAPSEQGQN LEEDTVTLEV LVAPAVPSCE VPSSALSGTV ENSBTAP00000000795/1-298 RNDAGKYRCE VSAPSEQGQN LEEDTVTLEV LVAPAVPSCE VPNSALRGTV BACU007597/1-312 RNDAGKYRYE VSAPSEQGQN LEEDTLTLEV LVAPAVPSCE VPSSALRGTV 151 200 bmy_12884T0/1-221 VELRCQDKEG NPAPEYTWFK DGIRLLENPK LGSPSANSSY TMNMKSGTLQ ENSTTRP00000004496/1-265 VELRCQDKEG NPAPEYTWFK DGIRLLENPK LGSPSANSSY TMNTKSGTLX ENSP00000383376/1-312 VELRCQDKEG NPAPEYTWFK DGIRLLENPR LGSQSTNSSY TMNTKTGTLQ ENSBTAP00000000795/1-298 VELRCQDKEG NPAPEYTWFK NGVPLSENPK LGSQITNSSY TMNPKSGTLQ BACU007597/1-312 VELRCQDKEG NPAPEYTWFK DGIRLLENPR LGSPSANSSY TMNTKSGTLQ 201 250 bmy_12884T0/1-221 FNTVSKLDSG EYSCEARNSV GHRRCPGKRM QVDDLNVSGI IAAVVVVALV ENSTTRP00000004496/1-265 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XVDDLNISGI IAAVVVVALV ENSP00000383376/1-312 FNTVSKLDTG EYSCEARNSV GYRRCPGKRM QVDDLNISGI IAAVVVVALV ENSBTAP00000000795/1-298 FNTVSKMDSG EYSCEARNSV GHRRCPGKRM QVDDLNISGI IAAVVIVALV BACU007597/1-312 FNTVSKLDRG EYSCEVRNSA GHRRCPGKRM QVDDLDISGI IAAVVVVALV 251 300 bmy_12884T0/1-221 ISVCGLGVCY AQRKGYFSIE NVQDDTKKKP PSRFQAHKIL YNLKEF---H ENSTTRP00000004496/1-265 ISVCGLGVCY AQRKGYFSKE TSFQKSSSAS KATAMSEN-- ---------- ENSP00000383376/1-312 ISVCGLGVCY AQRKGYFSKE TSFQKSNSSS KATTMSENVQ WLTPVIPALW ENSBTAP00000000795/1-298 ISVCGLGVCY AQRKGYFSKE TSFQKSSSAS KATTMSENDF KHTKSFII-- BACU007597/1-312 ISVCGLGVCY AQRKGYFSKE TSFQKSSSAS KATAMSENDF KHTKSLKEVH 301 350 bmy_12884T0/1-221 LCDAPKPQSL HY ENSTTRP00000004496/1-265 ---------- -- ENSP00000383376/1-312 KAAAGGSRGQ EF ENSBTAP00000000795/1-298 ---------- -- BACU007597/1-312 LCDAPKPQLL HY