KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:16 2014 Check: 00 .. Name: ENSP00000371420/1-572 Len: 581 Check: 1481 Weight: 1.00 Name: ENSBTAP00000000796/1-555 Len: 581 Check: 6436 Weight: 1.00 Name: ENSTTRP00000008460/1-559 Len: 581 Check: 2556 Weight: 1.00 Name: bmy_14517T0/1-552 Len: 581 Check: 5582 Weight: 1.00 Name: BACU003151/1-558 Len: 581 Check: 7499 Weight: 1.00 // 1 50 ENSP00000371420/1-572 MECLYYFLG- -----FLLLA ARLPLDAAKR FHDVLGNERP SAYMREHNQL ENSBTAP00000000796/1-555 MECLYCFLG- -----FLLLA AGLPLDAAKR FHDVLSNERP SGYMREHNQL ENSTTRP00000008460/1-559 MECLYCFLG- -----FLLLA ARLPLDAAKR VHDVLSNERP SGYMREHRQL bmy_14517T0/1-552 MECLYCFLG- -----FLLLA ARLPLDAAKR VHDVLSNERP SGYMREHKQL BACU003151/1-558 MYKHYLALGR AGRLNYRKRS IIVTFQHELR VHDVLSNERP SGYMREHKQL 51 100 ENSP00000371420/1-572 NGWSSDENDW NEKLYPVWKR GDMRWKNSWK GGRVQAVLTS DSPALVGSNI ENSBTAP00000000796/1-555 SGWSSDENDW NEKLYPVWKR GDSRWKSSWK GGRVQAVLTS DSPALVGSTI ENSTTRP00000008460/1-559 NGWSSDENYW NEKLYPVWKR GDSRWKNSWK ---VQALLTS DAPALVGSTI bmy_14517T0/1-552 NGWSSDENDW NEKLYPVWKR GDSRWKNSWK GGRVQALLTS DAPALVGSTI BACU003151/1-558 NGWSSDENDW NEKLYPVWKR GDSRWKNSWK GGRVQALLTS DAPALVGSTI 101 150 ENSP00000371420/1-572 TFAVNLIFPR CQKEDANGNI VYEKNCRNEA GLSADPYVYN WTAWSEDSDG ENSBTAP00000000796/1-555 TFAVNLVFPR CQKEDASGNI VYEKNCRNDT GASPDLYVYN WTAWTEDSDW ENSTTRP00000008460/1-559 TFAVNLVFPR CQQEGASGNI VYEKNFRNDT GPSPDPYVYN WTAWTEDGDW bmy_14517T0/1-552 TFAVNLVFSR CQQEDASGNI VYEKNCRNDT GPSPDPYVYN WTAWTEDSDW BACU003151/1-558 TFAVNLVFSR CQQEDASGNI VYEKNCRNDT GPSPDPYVYN WTAWTEDSDW 151 200 ENSP00000371420/1-572 ENGTGQSHHN VFPDGKPFPH HPGWRRWNFI YVFHTLGQYF QKLGRCSVRV ENSBTAP00000000796/1-555 GNDTSEGHHN VFPDGKPFPR PW---KKNFV YVFHTLGQYF QKLGQCSVTI ENSTTRP00000008460/1-559 GNGTRQGHH- ----RKPLPH PR---KWNFV FVFHTLGQYF QKLGQCSVRV bmy_14517T0/1-552 GNGTRQGHH- ----GKPFPH PP---KWNFV YVFHTLGQYF RKLGQCSVRV BACU003151/1-558 GNGTRHGHH- ----GKPFPH PP---KWNFV YVFHTLGQYF RKLGQCSVRV 201 250 ENSP00000371420/1-572 SVNTANVTLG PQLMEVTVYR RHGRAYVPIA QVKDVYVVTD QIPVFVTMFQ ENSBTAP00000000796/1-555 SINTANVSLG PQIMEVTVYR RHRRAYVPIA KVKDVYVVTD QIPVFVTMSQ ENSTTRP00000008460/1-559 SINTANVTLG PQIMEVTVYR RYRRAYVPIA KVKDVYVVTD QIPVFVTMSQ bmy_14517T0/1-552 SINTANVTLG PQIMEVTVYR RQRWAYVPIA KVKDVYVVTD QIPVFVTMSQ BACU003151/1-558 SINTANVTLG PQIMEVTVYR RQRRAYVPIA KVKDVYVVTD QIPVFVTMSQ 251 300 ENSP00000371420/1-572 KNDRNSSDET FLKDLPIMFD VLIHDPSHFL NYSTINYKWS FGDNTGLFVS ENSBTAP00000000796/1-555 KNNRNSSDET FLRDLPITFS VLIHDPSHFL NESAIYYKWN FGDNTGLFVS ENSTTRP00000008460/1-559 KNNRNSSDET FLKDLPITFD VLIHDPSHFL NESAIYYKWN FGDNTGLFVS bmy_14517T0/1-552 KNNRNSSDET FLKDLPITFD VLIHDPSHFL NESAIYYKWN FGDNTGLFVS BACU003151/1-558 KNNRNSSDET FLKDLPITFD VLIHDPSHFL NESAIFYKWN FGDNTGLFVS 301 350 ENSP00000371420/1-572 TNHTVNHTYV LNGTFSLNLT VKAAAPGPCP PPPPPPRPSK PTPSLATTLK ENSBTAP00000000796/1-555 NNHTLNHTYV LNGTFSLNLT VQAEVPGPC- -PLPSPRPPK TTPPL----- ENSTTRP00000008460/1-559 NNHTLNHTYV LNGTFSLNLT VQATVPGPC- -PSPSPRPPK TTASLASTLK bmy_14517T0/1-552 NNHTLNHTYV LNGTFSLNLT VQATVPGPC- -PSPSPRPPK TTPSL----- BACU003151/1-558 NNHTLNHTYV LNGTFSLNLT VQATVPGPC- -PSPSPRPPK TTPSL----- 351 400 ENSP00000371420/1-572 SYDSNTPGPA GDNPLELSRI PDENCQINRY GHFQATITIV EGILEVNIIQ ENSBTAP00000000796/1-555 -------VTA GDSTLELREI PDESCHITRY GYFKATITIV EGILEVNIIQ ENSTTRP00000008460/1-559 SCYSDSPVPA GDSALEPREI PDENCRINRY GYFKATITIV EGILEVNIIQ bmy_14517T0/1-552 ----DSPVPA GDNALEPREI PDKNCYINRY GYFKATITIV EGILEVNIIQ BACU003151/1-558 ----DSPVPG GDNALEPREI PDKNCYINRY GYFKATITIV EGILEVNIIQ 401 450 ENSP00000371420/1-572 MTDVLMPVPW PESSLIDFVV TCQGSIPTEV CTIISDPTCE ITQNTVCSPV ENSBTAP00000000796/1-555 VTDVPMPRPQ PDNSLVDFVV TCHGSIPTEV CTIISDPSCQ ITQNPVCDPV ENSTTRP00000008460/1-559 VTDVLMPVPQ PDNPLVDFVV NCQGSISTEV GTVISDPTRQ VTQNTVCDPV bmy_14517T0/1-552 VTDVLMPMPQ PDNPLVDFVV TCQGSIPTEV CTVVSDPTCQ VTQNTICDPV BACU003151/1-558 VTAVLMPVPQ PDNPLVDFVV TCQGSIPTEV CTVVSDPTCQ VTQNTICDPV 451 500 ENSP00000371420/1-572 DVD--EMCLL TVRRTFNGSG TYCVNLTLGD DTSLALTSTL ISVPDRDPAS ENSBTAP00000000796/1-555 AMELGDTCLL TVRRAFSGSG TYCMNLTLGN DASLALTSTL VSINSRDPAS ENSTTRP00000008460/1-559 NKDLGDMCLM TVRRACGGCG TYGMNRTLAD EASMALTSTL VSIPGRDPDS bmy_14517T0/1-552 NMDLGDMCLL TVRRAFGGSG TYCMNLTLGD DASLALTSTL VSIPGRDPAS BACU003151/1-558 DIDLGDMCLL TVRRAFGGSG TYCMNLTLGD DASLALTSTL VSIPGRDPAS 501 550 ENSP00000371420/1-572 PLRMANSALI -SVGCLAIFV TVISLLVYKK HKEYNPIENS PGNVVRSKGL ENSBTAP00000000796/1-555 LLRTANGILV -SLGCLAILV TVIAFLMYKK HKEYKPIENS PGIVIRGKGL ENSTTRP00000008460/1-559 LLRMANGTLV FFVVCMAIFV TVIALLVYKK HKEYKPIENS TGIMVRGKGL bmy_14517T0/1-552 LLRMANGTLV -FVGCMAIFV TVIALLVYKK HKEYKPIENS TGIVVRGKGL BACU003151/1-558 LLRMANGTLV -FVGCMAIFV TVIALLVYKK HKEYKPIENS TGIVVRGKGL 551 600 ENSP00000371420/1-572 SVFLNRAKAV FFPGNQEKDP LLKNQEFKGV S ENSBTAP00000000796/1-555 NVFLNHAKTL FFPGNQEKDP LLKNQ--PGI L ENSTTRP00000008460/1-559 NVFLNSAK-M LFPGNQEEDP LLKNQ--PGI L bmy_14517T0/1-552 NVFLNCAK-M FFPGYQEKDP LLKNQ--LGI L BACU003151/1-558 NVFLNCAK-M FFPGYQEKDP LLKNQ--PGI L