KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:18 2014 Check: 00 .. Name: ENSTTRP00000008128/1-524 Len: 549 Check: 4583 Weight: 1.00 Name: ENSP00000441039/1-549 Len: 549 Check: 7096 Weight: 1.00 Name: ENSBTAP00000000809/1-526 Len: 549 Check: 2122 Weight: 1.00 Name: bmy_11456T0/1-526 Len: 549 Check: 2399 Weight: 1.00 Name: BACU019471/1-528 Len: 549 Check: 5525 Weight: 1.00 // 1 50 ENSTTRP00000008128/1-524 ---------- ---------- MSFNSSLSHR KELSNLTEED GGQGGVVVTE ENSP00000441039/1-549 MSARGVVQHA LPTPRRGALT MSLNSSLSCR KELSNLTEEE GGEGGVIITQ ENSBTAP00000000809/1-526 ---------- ---------- MSLNSSLGHR KELSNLTEGA SDQGGSGVTE bmy_11456T0/1-526 ---------- ---------- MSLNSSLSHR KELSNLTEED GGQGGGVVTE BACU019471/1-528 ---------- ---------- MSLNSSLSHR KELSNLTEED GGQGGGVVTE 51 100 ENSTTRP00000008128/1-524 FIAIVVITIF VCLGNLVIVV TLYRKSYLLT LSNKFVFSLT LSNFLLSVLV ENSP00000441039/1-549 FIAIIVITIF VCLGNLVIVV TLYKKSYLLT LSNKFVFSLT LSNFLLSVLV ENSBTAP00000000809/1-526 FVAIVIITVF VCLGNLVIVI TLYRKSYLLT LSNKFVFSLT LSNFLLSVLV bmy_11456T0/1-526 FIAIVVITVF VCLGNLVIVV TLYRKSYLLT LSNKFVFSLT LSNFLLSVLV BACU019471/1-528 FIAIVVITVF VCLGNLVIVV TLYRKSYLLT LSNKFVFSLT LSNFLLSVLV 101 150 ENSTTRP00000008128/1-524 LPFVATSSVR REWIFGVVWC NFSALLYLLI SSASMLTLGV IAVDRYYAVL ENSP00000441039/1-549 LPFVVTSSIR REWIFGVVWC NFSALLYLLI SSASMLTLGV IAIDRYYAVL ENSBTAP00000000809/1-526 LPFVVTSSIR REWIFGVVWC NFSALLYLLI SSASMLTLGI IAVDRYYAVL bmy_11456T0/1-526 LPFVATSSIR REWIFGVVWC NFSALLYLLI SSASMLTLGV IAVDRYYAVL BACU019471/1-528 LPFVATSSIR REWIFGVVWC NFSALLYLLI SSASMLTLGV IAVDRYYAVL 151 200 ENSTTRP00000008128/1-524 YPMVYPMKIT GNRAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000441039/1-549 YPMVYPMKIT GNRAVMALVY IWLHSLIGCL PPLFGWSSVE FDEFKWMCVA ENSBTAP00000000809/1-526 YPMAYPMKI- GNRAVMVL-Y IWLHSLIGCL PPLFGWSSVE FDEFKWMCVA bmy_11456T0/1-526 YPMVYPMKIT GNRAVVALAY IWLHSLIGCL PPLFGWSSVE FDEFKWMCVA BACU019471/1-528 YPMVYPMKIT GNRAVVALAY IWLHSLVGCL PPLFGWSSVE FDEFKWMCVA 201 250 ENSTTRP00000008128/1-524 XXXXXXXXXX XXXXXXXXXX XXXXXVCYGF IFRVARV-AR KVHCGTVVLV ENSP00000441039/1-549 AWHREPGYTA FWQIWCALFP FLVMLVCYGF IFRVARVKAR KVHCGTVVIV ENSBTAP00000000809/1-526 AWHREPGYTA FWQIWCALLP FLVMLVCYGF IFRVARVKAR KVHCGAVVTV bmy_11456T0/1-526 AWHREPGYTA FWQIWCALFP FLVMLVCYGF IFRVARVKAR KVHCGTVVLV BACU019471/1-528 AWHREPGYTA FWQIWCALFP FLVMLVCYGF IFRVARVKAR KVHCGTVVLV 251 300 ENSTTRP00000008128/1-524 R-DAHGNGRK NSSTSTSSSG SRKNAFQGVV YSANQCKALI TILVVIG-FM ENSP00000441039/1-549 EEDAQRTGRK NSSTSTSSSG SRRNAFQGVV YSANQCKALI TILVVLGAFM ENSBTAP00000000809/1-526 EVGVQRTGRK NSSTSTSSSG SRKSAFQGVV YSANQCKALV TILVVIGAFM bmy_11456T0/1-526 EEDAHRNGRK NSSTSTSSSG SRKNAFQGVV YSANQCKALI TILVVIGAFM BACU019471/1-528 EEDVHRNGRK NSSTSTSSSG SRKNAFQGVV YSANQCKALI TILVVIGAFM 301 350 ENSTTRP00000008128/1-524 VTWGPYMVVI TSEALWGKNY VSPTLETWAT WLSFTSAVCH PLIYGLWNKT ENSP00000441039/1-549 VTWGPYMVVI ASEALWGKSS VSPSLETWAT WLSFASAVCH PLIYGLWNKT ENSBTAP00000000809/1-526 VTWGPYMVVI TSEALWGKNC VSPTLETWAT WLSFTSAICH PLIYGLWNKT bmy_11456T0/1-526 VTWGPYMVVI TSEALWGKNY VSPTLETWAT WLSFTSAICH PLIYGLWNKT BACU019471/1-528 VTWGPYMVVI TSEALWGKNY VSPTLETWAT WLSFTSAICH PLIYGLWNKT 351 400 ENSTTRP00000008128/1-524 VRKELLGMCF GDRYYREPFV QRQRTSRLFS ISNRITDLGL SPHLTALMAG ENSP00000441039/1-549 VRKELLGMCF GDRYYREPFV QRQRTSRLFS ISNRITDLGL SPHLTALMAG ENSBTAP00000000809/1-526 VRKELLGMCF GDRYYREPFV QRQRTSRLFS ISNRITDLGL SPHLTALMAG bmy_11456T0/1-526 VRKELLGMCF GDRYYREPFV QRQRTSRLFS ISNRITDLGL SPHLTALMAG BACU019471/1-528 VRKELLGMCF GDRYYREPFV QRQRTSRLFS ISNRITDLGL SPHLTALMAG 401 450 ENSTTRP00000008128/1-524 GQPLGNSSST GDTGFSCS-D SGTDVMLLED FTSDDNPPSH -TCPPKRRSS ENSP00000441039/1-549 GQPLGHSSST GDTGFSCSQD SGTDMMLLED YTSDDNPPSH CTCPPKRRSS ENSBTAP00000000809/1-526 EQPLGNSSST GDTGFSCSQD SGTDVMLLED YTSDDNPLHG -TCPPKRRSS bmy_11456T0/1-526 GQPLGNSSST GDTGFSCSQD SGTDVMLLED FTSDDNPPSH -TCPPKRRSS BACU019471/1-528 GQPLGNSSST GDTGFSCSQD SGTDVMLLED FTSDDNPPSH -TCPPKRRSS 451 500 ENSTTRP00000008128/1-524 VTFEDEVEQI KEAAKNPVLH VRAEVHKSLD SYAASLAKAI EAEAKVNLFG ENSP00000441039/1-549 VTFEDEVEQI KEAAKNSILH VKAEVHKSLD SYAASLAKAI EAEAKINLFG ENSBTAP00000000809/1-526 VTFEDEVEQI KEAAKNPILH VKADVHKSLD SYATSLAKAI EAEAKINLFG bmy_11456T0/1-526 VTFEDEVEQI REAAKNPILH VKAEVHKSLD SYAASLAKAI EVEAKVNLFG BACU019471/1-528 VTFEDEVEQI REAAKNPILH VKAEVHKSLD SYAASLAKAI EAEAKVNLFG 501 550 ENSTTRP00000008128/1-524 EEALPGVLLA ARTVPGVGFG SRRGSRTLAS QRLQLQSIEE GNVLAAEQT ENSP00000441039/1-549 EEALPGVLVT ARTVPGGGFG GRRGSRTLVS QRLQLQSIEE GDVLAAEQR ENSBTAP00000000809/1-526 EEALPGVLLT ARTVPGIGFG SRRGSRTLAG QRLQLQSIEE GDVLATEQR bmy_11456T0/1-526 EEALPGVLLA ARTVPGLGFG SRRGSRTLAS QR--LQSIEE GNVLAAEQT BACU019471/1-528 EEALPGVLLA ARTVPGVGFG SRRGSRTLAS QRLQLQSIEE GNVLAAEQT