KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:12:19 2014 Check: 00 .. Name: ENSP00000413632/1-681 Len: 681 Check: 1888 Weight: 1.00 Name: ENSBTAP00000000816/1-681 Len: 681 Check: 4407 Weight: 1.00 Name: bmy_11995T0/1-639 Len: 681 Check: 5076 Weight: 1.00 Name: ENSTTRP00000016254/1-590 Len: 681 Check: 1097 Weight: 1.00 // 1 50 ENSP00000413632/1-681 MSNLKMKEAA LIYLDRSGGL QKFIDDCKYY NDSKQSYAVY RFKILINPSD ENSBTAP00000000816/1-681 MSNLKMKEAA LIYLDRSGGL QKFIDDCKYY NDSKQSYAVY RFNVLINPSD bmy_11995T0/1-639 MSNLKMKXAA LIYLDRSGGL QKFIDNCKSY NDSKQSYAVY RFSILINPSD ENSTTRP00000016254/1-590 MSNLKMKEAA LIYLDRSGGL QKFIDSCKSY SDSKQSYAVY RFSILINPSD 51 100 ENSP00000413632/1-681 VVELDAELGN HILHQPLKAA EVFQSVCFIA VKTLSLIGQL QTETQINIVL ENSBTAP00000000816/1-681 IVELDAELGN HILHQPLKAA QVFQSVCYIA VKTLSLIGQL QTETQINIVL bmy_11995T0/1-639 IIELDAELGN HILHQPLKAA QVFQSVCFIA VKSLSLIGQL QTEAQINILL ENSTTRP00000016254/1-590 IIELDAELGN HILHQPLKAA QVFQSVCFIA VKTLSLIEQL QTEAQINILL 101 150 ENSP00000413632/1-681 KLTHLPPLPS YGLDLCEFPL DYTSQRFYMM QGIVIAMTTI TKYTQGARFL ENSBTAP00000000816/1-681 KLTHLPPLPS YYLDLCEFPR DYTSQRFYTM QGIVIAMTTV TKYTQGARFL bmy_11995T0/1-639 KLTHLPPLPS YSLDLCEFPL DYTSQRFYMM QGIVIAMTTV TKYTQGARFL ENSTTRP00000016254/1-590 KLTHLPPLPS YSLDLCEFPL DYTSQRFYMM QGIVIAMTTV TKYTQGARFL 151 200 ENSP00000413632/1-681 CSDEACPLSK GFQYIRVHVP GATESATIRN DFLCNLCASS LQEDRKFRVL ENSBTAP00000000816/1-681 CSDEACPLSK GFQYIRVHVP GATESATVRN DFLCNLCSSS LQEDRKFRVL bmy_11995T0/1-639 CSDDACPLSK GFQYIRVHVP GATESATVRN DFLCNLCSSS LQEDRKFRVL ENSTTRP00000016254/1-590 CSDEACPLSK GFQYIRVHVP GATESATIRN DFLCNLCSSS LQEDRKFRVL 201 250 ENSP00000413632/1-681 GDKQIVEIIA TKALRAFQGY SNNQPFRFQS LTIFLRDESV NKMNIGNEYK ENSBTAP00000000816/1-681 GDKQIVEIIT AESLHAFQGY CNNQPFRFQS LTVFLRDESV NKMNIGNEYK bmy_11995T0/1-639 GDKQIVEIIT TKALRAFQGY SNNQPFRFQS LTIFLR---- ---------- ENSTTRP00000016254/1-590 GDKQIVEIIT TKALRAFQGY SNNQPFRFQS LTVFLRDELV NEVNIGNEYK 251 300 ENSP00000413632/1-681 IIGIPTCVKT SQTAVCIEAN SITFCNSKVP SGISDNFRCL LSLTSSSCWK ENSBTAP00000000816/1-681 VIGIPTCVKT SQTAVCVEAN SITFCIPKVP SGISDNFRCL LSLTSSSCWK bmy_11995T0/1-639 ---------- ---------- --------VP SGISDNFSCL LSLTSSSYWK ENSTTRP00000016254/1-590 IIGIPTCVKT SQTALCIEAN SITVFNPKVP SGISDNLRCL LSLTSSSYWK 301 350 ENSP00000413632/1-681 FTAILANIFA SQITPPGTYN LLKLCLLMSL VQTTDRNKEL EDCLDILIIT ENSBTAP00000000816/1-681 FTAILANIFA SQIVPPGTYN LLKLCLLMSL VQTSDRNKEL ENFLDILIVT bmy_11995T0/1-639 FTAILANIFA SQIVPPGTYN LLKLCLLMSL VQTSDRNKEL EDCLDLLIIT ENSTTRP00000016254/1-590 FTAILANVFA SQIVPPGTYN LLKLCLLMSL VQTSDRNKEL EDCLDLLIIT 351 400 ENSP00000413632/1-681 SDTLLIDRLL NFSINLVPRG IRHLVSTEIF PTLSRNKYGT GAVSIQAGSA ENSBTAP00000000816/1-681 SDTLLIDRLL NFSISLVPRG IRHSVSTEIF PTVSRNKYGT GAVSIQAGSA bmy_11995T0/1-639 SDILLVDRLL NFSINLVPRG IRHLVSTEIF PTLSRNKYGT GAVSIQAGSA ENSTTRP00000016254/1-590 SDILLVDXXX XFSINLVPRG IRHPVSTEIF PTLSRNKYGT GAVSIQGGSA 401 450 ENSP00000413632/1-681 LLAKGGICFI GDLASHKKDK LEQLQTVLES RSITVYIPGK KFGEDIDQQM ENSBTAP00000000816/1-681 LLAKGGICFI GDLASHKKDK LEQLQSAVES RSITVYISGK KFGDDVDQQM bmy_11995T0/1-639 LLAKGGICFI GDLASHKKDK LEQLQSAVES RSITVYISGK KFGDDMDQQM ENSTTRP00000016254/1-590 LLAKGGICFI GDLASHKKDK LEQLQSAVES RSITVYISGK KFGDDMDQQM 451 500 ENSP00000413632/1-681 TFPVQCSFWS FVDVDSSSRR NAQKINTLIG QMDCSLIPAN LVEAFGLLIN ENSBTAP00000000816/1-681 TFPVQCSFWS FLDMDSPSRR NIQKTNMLIG QMDCSLIPAN LVEAFALLIN bmy_11995T0/1-639 TFPVQCSFWS FVDMDSSSRR NIQKTNTLIG QMDCSLIPAN LVEAFGLLIN ENSTTRP00000016254/1-590 TFPVQCSFWS FVDMDSSSRR NVQKTNTLIG QMDCSLIPAN LIEAFGLLIN 501 550 ENSP00000413632/1-681 CNESSPCHPF LPTVQHTLNK AINPEGLFYA ASRQFTTEDF EKLLAFAKNL ENSBTAP00000000816/1-681 CSESSPCHPL LPTVQHTLKK AIDPEGLLYL ASKQFTTEDF EKLLAFAKNL bmy_11995T0/1-639 CNESSPCHPL LPTVQHTLKK AIDPEGLLYV ASKQFTTEDF EKLLAFAKNL ENSTTRP00000016254/1-590 CNESSPCHPL LPTVQHTLKK AIDPEGLLYV ASKQFTTEDF EKLLAFAKNL 551 600 ENSP00000413632/1-681 NVEFSLEAER MTHGYYLASR RIRTGSVCGS KLSASALKYL VFLSEAHARL ENSBTAP00000000816/1-681 NVEFSLEAER MIHGYYLASR RIRTDSICGS KLSASALKYL VSLSEAHARL bmy_11995T0/1-639 NVEFSLEAER MIHGYYLASR RIRTDSICGS KLSASALKYL VSLSEAHARL ENSTTRP00000016254/1-590 NVEFSLEAER MIHGYYLASR RIRTDSICGS KLSASALKYL ---------- 601 650 ENSP00000413632/1-681 NLRNKVLKED VLIAALLFET SLTLKYGATV FCVAPNAVFP FELYNEEYLE ENSBTAP00000000816/1-681 NLRNKVLKED VLIAALLFET SLTLKYGAAV FCVAPNAVFP FEQYNEDYLE bmy_11995T0/1-639 NLRNKVLKED VLIAALLFET SLTLKYGAAV LCVAPNAVFP FELYNEEYLE ENSTTRP00000016254/1-590 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000413632/1-681 QRDLYLTQCQ QQLEQFIATY GPGTTIFSSD E ENSBTAP00000000816/1-681 QRDVYLTECQ QQLQQFIATY GPGTAIFASD E bmy_11995T0/1-639 QRDIYLTQCQ QQLQQFIATY GPGTAIFASD E ENSTTRP00000016254/1-590 ---------- ---------- ---------- -