KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:12:19 2014 Check: 00 .. Name: ENSBTAP00000000819/1-505 Len: 563 Check: 3575 Weight: 1.00 Name: ENSTTRP00000012346/1-561 Len: 563 Check: 9135 Weight: 1.00 Name: BACU016052/1-498 Len: 563 Check: 6605 Weight: 1.00 Name: bmy_18681T0/1-432 Len: 563 Check: 8941 Weight: 1.00 // 1 50 ENSBTAP00000000819/1-505 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012346/1-561 EEDAGRIKDC WDNQEAPALS TCSNANIFRR INAILDNSLD FSRVCTTPVN BACU016052/1-498 ---------- ---------- ---------- ---------- ---------- bmy_18681T0/1-432 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000000819/1-505 --------DF QDSEETVTSR MLFPTSAQDS SRGLPDANDL CLGLQSLSLT ENSTTRP00000012346/1-561 RGIHDHLPDF QDSEETVTSR MLFPTSAQDS SRGLPDANDL CLGLQSLSLT BACU016052/1-498 --------DF QDSEETVTSR MLFPTSAQDS SRGLPDANDL CLGLQSLSLT bmy_18681T0/1-432 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000000819/1-505 GWDRPWSTQD SDSSAQSSTH SVLSMLHNPL GNVLGKPPLS FLPLDPLGSD ENSTTRP00000012346/1-561 GWDRPWSTQD SDSSAQSSTH SVLSMLHNPL GSVLGKPPLS FLPLDPLGSD BACU016052/1-498 GWDRPWSTQD SDSSAQSSTH SVLSMLHNPL GSVLGKPPLS FLPLDPLGSD bmy_18681T0/1-432 ---------- ---------- ----MLHNPL GSVLGKPPLS FLPLDPLGSD 151 200 ENSBTAP00000000819/1-505 LVDKFPAPSI RGPRLDTRPI LDSRSSSPSD SDTSGFSSGS DHLSDLISSL ENSTTRP00000012346/1-561 LVDKFPAPSV RGSRLDTRPI LDSRSSSPSD SDTSGFSSGS DHLSDLISSL BACU016052/1-498 LVDKFPAPSV RGSRLDTRPI LDSRSSSPSD SDTSGFSSGS DHLSDLISSL bmy_18681T0/1-432 LVDKFPAPSV RGSRLETRPI LDSRSSSPSD SDTSGFSSGS DHLSDLISSL 201 250 ENSBTAP00000000819/1-505 RISPPLPFLS LTGGGPRDPL KMGVGSRMDQ EQAALAAVTP SPTSASKRWP ENSTTRP00000012346/1-561 RISPPLPFLS LTGGGPRDPL KMGVGSRLDQ EQAALAAVTP SPTSASKRWP BACU016052/1-498 RISPPLPFLS LTGGGPRDPL KMGVGSRLDQ EQAALAAVTP SPTSASKRWP bmy_18681T0/1-432 RISPPLPFLS LTGGGPRDPL KMGVGSRLDQ EQAALAAVTP SPTSASKRWP 251 300 ENSBTAP00000000819/1-505 GASVWPSWDL LEAPKDPFSI EREARLHRQA AAKAVNEATC TWSGQLPPRN ENSTTRP00000012346/1-561 GASVWPSWDL LEAPKDPFSI EREARLHRQA A--AVNEATC TWSGQLPPRN BACU016052/1-498 GASVWPSWDL LEAPKDPFSI EREARLHRQA A--AVNEATC TWSGQLPPRN bmy_18681T0/1-432 GASVWPSWDL LEAPKDPFSI EREARLHRQA A--AVNEATC TWSGQLPPRN 301 350 ENSBTAP00000000819/1-505 YKNPIYSCKV FLGGVPWDIT EAGLVNTFRV FGSLSVEWPG KDGKHPRCPP ENSTTRP00000012346/1-561 YKNPIYSCKV FLGGVPWDIT EAGLVNTFRV FGSLSVEWPG KDGKHPRCPP BACU016052/1-498 YKNPIYSCKV FLGGVPWDIT EAGLVNTFRV FGSLSVEWPG KDGKHPRCP- bmy_18681T0/1-432 YKNPIYSCKV FLGGVPWDIT EAGLVNTFRV FGSLSVEWPG KDGKHPRCP- 351 400 ENSBTAP00000000819/1-505 KGNMPKGYVY LVFELEKSVR ALLQACSHDP LSPDGLSEYY FKMSSRRMRC ENSTTRP00000012346/1-561 KGNMPKGYVY LVFELEKSVR ALLQACSHDP LSPDGLSEYY FKMSSRRMRC BACU016052/1-498 ----PKGYVY LVFELEKSVR ALLQACSHDP LSPDGLSEYY FKMSSRRMRC bmy_18681T0/1-432 ----PKGYVY LVFELEKSVR ALLQACSHDP LSPDGLSEYY FKMSSRRMRC 401 450 ENSBTAP00000000819/1-505 KEVQVIPWVL ADSNFVQSPS QRLDPSRTVF VGALHGMLNA EALAAILNDL ENSTTRP00000012346/1-561 KEVQVIPWVL ADSNFVQSPS QRLDPSRTVF VGALHGMLNA EALAAILNDL BACU016052/1-498 KEVQVIPWVL ADSNFVQSPS QRLDPSRTVF VGALHGMLNA EALAAILNDL bmy_18681T0/1-432 KEVQVIPWVL ADSNFVQSPS QRLDPSRTVF VGALHGMLNA EALAAILNDL 451 500 ENSBTAP00000000819/1-505 FGGVVYAGID TDKHKYPIGS GRVTFNNQRS YLKAVSAAFV EIKTTKFTKK ENSTTRP00000012346/1-561 FGGVVYAGID TDKHKYPIGS GRVTFNNQRS YLKAVSAAFV EIKTTKFTKK BACU016052/1-498 FGGVVYAGID TDKHKYPIGS GRVTFNNQRS YLKAVSAAFV EIKTTKFTKK bmy_18681T0/1-432 FGGVVYAGID TDKHKYPIGS GRVTFNNQRS YLKAVSAAFV EIKTTKFTKK 501 550 ENSBTAP00000000819/1-505 VQIDPYLEDS VCHICSSQPG PFFCRDQVCF KYFCRSCWHW RHSMEGLRHH ENSTTRP00000012346/1-561 VQIDPYLEDS LCHICSSQPG PFFCRDQVCF KYFCRSCWHW RHSMEGLRHH BACU016052/1-498 VQIDPYLEDS LCHICSSQPG PFFCRDQVCF KYFCRSCWHW RHSMEGLRHH bmy_18681T0/1-432 VQIDPYLEDS LCHICSSQPG PFFCRDQVCF KYFCRSCWHW RHSMEGLRHH 551 600 ENSBTAP00000000819/1-505 SPLMRNQKNR DSS ENSTTRP00000012346/1-561 SPLMRNQKNR DSS BACU016052/1-498 SPLMRNQKNR DSS bmy_18681T0/1-432 SPLMRNQKNR DSS