KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:12:21 2014 Check: 00 .. Name: ENSTTRP00000009705/1-492 Len: 497 Check: 6076 Weight: 1.00 Name: bmy_10374T0/1-324 Len: 497 Check: 2292 Weight: 1.00 Name: ENSP00000288840/1-496 Len: 497 Check: 3816 Weight: 1.00 Name: ENSBTAP00000000824/1-497 Len: 497 Check: 8817 Weight: 1.00 // 1 50 ENSTTRP00000009705/1-492 MFRSKRSGLV RRLWRSRVVP DREE---GSG GGGDEDGSVG SRAEPAPRAR bmy_10374T0/1-324 MFRSKRSGLV RRLWRSRVVP DREE-GSGGG GGGDEDGSVG SRAEPAPRAR ENSP00000288840/1-496 MFRSKRSGLV RRLWRSRVVP DREEGGSGGG GGGDEDGSLG SRAEPAPRAR ENSBTAP00000000824/1-497 MFRSKRSGLV RRLWRSRVVP DREEGGGSGG GGGDEDGSVG SRAEPAARAR 51 100 ENSTTRP00000009705/1-492 EGGGCGRPEV RPVALRRPRD AVGQRGAQGA GRRRRAGGPP RPMSEPGAGS bmy_10374T0/1-324 EGGGCGRPEV RPVALRRPRD AVGQRGAQGA GRRRRAGGPP RPMSEPGAGS ENSP00000288840/1-496 EGGGCGRSEV RPVAPRRPRD AVGQRGAQGA GRRRRAGGPP RPMSEPGAGA ENSBTAP00000000824/1-497 EGGGCGRPEV RPVALRRPRD AVGQRGAQGA GRRRRSGGPP RPMSEPGAGS 101 150 ENSTTRP00000009705/1-492 GGSPLDVAEP GGRGWLPESD CETVTCCLFS ERDAAGAPRD AGDPLAGAAL bmy_10374T0/1-324 GGSPLHVAEP GGRGWLPESD CETVTCCLFS ERDAAGAPRD AGDLLAGAAL ENSP00000288840/1-496 GSSLLDVAEP GGPGWLPESD CETVTCCLFS ERDAAGAPRD ASDPLAGAAL ENSBTAP00000000824/1-497 GGSSLDVGEP GGQGWLPESD CETVTCCLFS ERDAAGAPRE AGEPLVGAAQ 151 200 ENSTTRP00000009705/1-492 EPTGGGRSRE ARSRLLLLEH ELKTVTYSLL RL--ERSLDT LLEAVXXXXX bmy_10374T0/1-324 EPAGGGRSRE ARSRLLLLEQ ELKTVTYSLL KRLKERSLDT LLEAVESRGG ENSP00000288840/1-496 EPAGGGRSRE ARSRLLLLEQ ELKTVTYSLL KRLKERSLDT LLEAVESRGG ENSBTAP00000000824/1-497 EPEGGGRSRE ARSRLLLLEQ ELKTVTYSLL KRLKERSLDT LLEAVESRGG 201 250 ENSTTRP00000009705/1-492 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10374T0/1-324 VPGGCVLVPR ADLRLGGQPA PPQLLLGRLF RWPDLQHAVE LKPLCGCHSF ENSP00000288840/1-496 VPGGCVLVPR ADLRLGGQPA PPQLLLGRLF RWPDLQHAVE LKPLCGCHSF ENSBTAP00000000824/1-497 VPGGCVLVPR ADLRLGGQPA PPQLLLGRLF RWPDLQHAVE LKPLCGCHSF 251 300 ENSTTRP00000009705/1-492 XXXXXXXXXX XXXXXXXXXX XXXSPPPPYS RLSPRDEYKP LXLSDSTLSY bmy_10374T0/1-324 AAAADGPTVC CNPYHFSRLC GPESPPPPYS RLSPRDEYKP LDLSDSTLSY ENSP00000288840/1-496 AAAADGPTVC CNPYHFSRLC GPESPPPPYS RLSPRDEYKP LDLSDSTLSY ENSBTAP00000000824/1-497 AAAADGPTVC CNPYHFSRLC GPESPPPPYS RLSPRDEYKP LDLSDSTLSY 301 350 ENSTTRP00000009705/1-492 TETEATNSLI TAPGEFSDAS MSPDATKPSH WCSVAYWEHR TRVGRLYAVY bmy_10374T0/1-324 TETEATNSLI TAPGEFS--- ---------- ---------- ---------- ENSP00000288840/1-496 TETEATNSLI TAPGEFSDAS MSPDATKPSH WCSVAYWEHR TRVGRLYAVY ENSBTAP00000000824/1-497 TETEAANSLI TAPGEFSDAS MSPDATKPSH WCSVAYWEHR TRVGRLYAVY 351 400 ENSTTRP00000009705/1-492 DQAVSIFYDL PQGSGFCLGQ LNLEQRSESV RRTRSKIGFG ILLSKEPDGV bmy_10374T0/1-324 ---------- --GGGPVAGA ---------- ---------- ---------- ENSP00000288840/1-496 DQAVSIFYDL PQGSGFCLGQ LNLEQRSESV RRTRSKIGFG ILLSKEPDGV ENSBTAP00000000824/1-497 DQAVSIFYDL PQGSGFCLGQ LNLEQRSESV RRTRSKIGFG ILLSKEPDGV 401 450 ENSTTRP00000009705/1-492 WAYNRGEHPI FVNSPTLDAP GGRALVVRKV PPGYSIKVFD FERSGLLQHG bmy_10374T0/1-324 ---------- ---------- ---------- ---------- ---------- ENSP00000288840/1-496 WAYNRGEHPI FVNSPTLDAP GGRALVVRKV PPGYSIKVFD FERSG-LQHA ENSBTAP00000000824/1-497 WAYNRGEHPI FVNSPTLDAP GGRALVVRKV PPGYSIKVFD FERSGLLQHG 451 500 ENSTTRP00000009705/1-492 PEPDAADGPY DPNSVRISFA KGWGPCYSRQ FITSCPCWLE ILLNNHR bmy_10374T0/1-324 ---------- ---------- ---------- ---------- ------- ENSP00000288840/1-496 PEPDAADGPY DPNSVRISFA KGWGPCYSRQ FITSCPCWLE ILLNNPR ENSBTAP00000000824/1-497 PEPDAADGPY DPNSVRISFA KGWGPCYSRQ FITSCPCWLE ILLNNHR