KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:21 2014 Check: 00 .. Name: ENSP00000336606/1-910 Len: 910 Check: 4760 Weight: 1.00 Name: ENSBTAP00000000833/1-909 Len: 910 Check: 355 Weight: 1.00 Name: ENSTTRP00000005969/1-909 Len: 910 Check: 8933 Weight: 1.00 Name: bmy_20620T0/1-655 Len: 910 Check: 5087 Weight: 1.00 Name: BACU000491/1-909 Len: 910 Check: 2671 Weight: 1.00 // 1 50 ENSP00000336606/1-910 MRRSAAPSQL QGNSFKKPKF IPPGRSNPGL NEEITKLNPD IKLFEGVAIN ENSBTAP00000000833/1-909 MRRSAAPSQL QGNPFKKPKF ISPARSHPSP NEEVAKLNSD IKLFEVAANK ENSTTRP00000005969/1-909 MRRSAAPSQL QGNPFKKPKF IPPARSNPSP NEEVTKLNSD IKLSEVAANK bmy_20620T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU000491/1-909 MRRSAAPSQF QGNPFKKPKF IPPARSNPSP NEEVTKLNSD IKLFEVAANK 51 100 ENSP00000336606/1-910 NTFLPSQNDL RICSLNLPSE ESTREINNRD NCSGKYCFEA PTLATLDPPH ENSBTAP00000000833/1-909 NNFLQPQNDP RTCNFNLPTK ECAKGINHGD NYREKYCLEA STKTTLDLHH ENSTTRP00000005969/1-909 NTFLQSQNDP RICSFNLPAE ESSRGINHED NYREKYCLEA SAKTTSDPHH bmy_20620T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU000491/1-909 NTFLQSQNDP RICSFNLPTE ESSRGINHED NYREKYCLEA SAKTTSDPHH 101 150 ENSP00000336606/1-910 TVHSAPKEVA VSKEQEEKSD SLVKYFSVVW CKPSKKKHKK WEGDAVLIVK ENSBTAP00000000833/1-909 TVHSAPKEIT VSKGQEEKPD SLVKYFSVVW CKASKKKHKK WEGDGVLIVK ENSTTRP00000005969/1-909 TVHLAPKEIT VSKGQEEEPD SLVKYFSVVW CKPSKKKHKK WEGDAVLIVK bmy_20620T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU000491/1-909 TVHLAPKEIT VSKGQEEEPD SLVKYFSVVW CKPSKKKHKK WEGDAVLIVK 151 200 ENSP00000336606/1-910 GKSFILKNLE GKDIGRGIGY KFKELEKIEE GQTLMICGKE IEVMGVISPD ENSBTAP00000000833/1-909 GKSFTLKDLE GKDIGRGTGY KLKELEKIEE GQTMMIGGKE IEVMGIISPD ENSTTRP00000005969/1-909 GKSFTLKDLE GKDIGRGIGY KFKELEKIEE GQTMTIGGKE IEVMGIISPD bmy_20620T0/1-655 ---------- ---------- ---------- ---MMIGGKE IEVMGIISPD BACU000491/1-909 GKSFTLKDLE GKDIGRGIGY KFKELEKIEE GQTMMIGGKE IEVMGIISPD 201 250 ENSP00000336606/1-910 DFSSGRCFQL GGGSTAISHS SQVARKCFSN PFKSVCKPSS KENRQNDFQN ENSBTAP00000000833/1-909 DFNSGRCFQF GGGCSAILSS SQAAKKCFSN PFKSVCKLSS KENKQNSFQS ENSTTRP00000005969/1-909 DFNSGRCFQL GGGSSAALCS SQAVKKCFSN PFKSVCKLSS KENRQKSFQN bmy_20620T0/1-655 DFNSGRCFQL GGGSSAALRS SQAVKKCLSN PFKSVCKLSS KEKRQNSFQN BACU000491/1-909 DFNSGRCFQL GGGSSAALRS SQAVKKCFSN PFKSVCKLSS KEKRQNSFQN 251 300 ENSP00000336606/1-910 CKPRHDPYTP NSLVMPRPDK NHQWVFNKNC FPLVDVVIDP YLVYHLRPHQ ENSBTAP00000000833/1-909 CKPRHDPYAP NSLVMLRPDK NHQWLFNKNC FPVVDVVIDP HLVYYLRPHQ ENSTTRP00000005969/1-909 CKPRHDPYAP NSLVMPQPDN NHQQMFSKNC FPVVDVVIDP HLVFHLRPHQ bmy_20620T0/1-655 CKPRHDPYAP NSLVMLQPDN NHQWMFNKSC FPVVDVVIDP HLVFHLRPHQ BACU000491/1-909 CKPRHDPYAP NSLVMLRPDN NHQWMFNKNC FPVVDVVIDP HLVFHLRPHQ 301 350 ENSP00000336606/1-910 KEGIIFLYEC VMGMRMNGRC GAILADEMGL GKTLQCISLI WTLQCQGPYG ENSBTAP00000000833/1-909 KEGITFLYEC VMGMRVNGRC GAILADEMGL GKTLQCISLI WTLQCQGPYG ENSTTRP00000005969/1-909 KEGIIFLYEC VMGMRVNGRC GAILADEMGL GKTLQCISLI WTLQCQGPYG bmy_20620T0/1-655 KEGIIFLYEC VMGMRVNGRC GAILADEMGL GKTLQCISLI WTLQCQGPYG BACU000491/1-909 KEGIIFLYEC VMGMRVNGRC GAILADAMGL GKTLQCISLL WTLQCQGPYG 351 400 ENSP00000336606/1-910 GKPVIKKTLI VTPGSLVNNW KKEFQKWLGS ERIKIFTVDQ DHKVEEFIKS ENSBTAP00000000833/1-909 GKPIVKKTLI VTPGSLVNNW KKEFQKWLGI ERIKIFTVDQ DHKVEEFTKS ENSTTRP00000005969/1-909 GKPVIKKTLI VSPGSLVNNW RKEFQKWLGI ERIKIFTVDQ DHKVEEFAKS bmy_20620T0/1-655 GKPVIKKTLI VSPGSLVNNW RKEFQKWLGS ERIKIFTVDQ DHKVEEFTKS BACU000491/1-909 GKPVIKKTLI VSPGSLVNNW RKEFQKWLGS ERIKIFTVDQ DHKVEEFTKS 401 450 ENSP00000336606/1-910 IFYSVLIISY EMLLRSLDQI KNIKFDLLIC DEGHRLKNSA IKTTTALISL ENSBTAP00000000833/1-909 PFYSVLIISY EMLLRSLDQI KNVKFDLLIC DEGHRLKNST IKTTTALISL ENSTTRP00000005969/1-909 PFYSVLIISY EMLLRSLDQI KNIKFDLLIC DEGHRLKNST IKTATALISL bmy_20620T0/1-655 PFYSVLIISY EMLLRSLDQI KNIKFDLLIC DEGHRLKNST IKTATALISL BACU000491/1-909 PFYSVLIISY EMLLRSLDQI KNIKFDLLIC DEGHRLKNST IKTATALISL 451 500 ENSP00000336606/1-910 SCEKRIILTG TPIQNDLQEF FALIDFVNPG ILGSLSSYRK IYEEPIILSR ENSBTAP00000000833/1-909 SCEKRIILTG TPVQNDLQEF FTLIDFVNPG ILGSLSAYRK IYEEPIIISR ENSTTRP00000005969/1-909 ACEKRIILTG TPVQNDLQEF FALIDFVNPG ILGSLPSYRK IYEEPIIKSR bmy_20620T0/1-655 SCEKRIILTG TPVQNDLQEF FALIDFVNPG ILGSLPSYRK IYEEPIIKSR BACU000491/1-909 PCEKRIILTG TPVQNDLQEF FALIDFVNPG ILGSLPSYRK IYEEPIIKSR 501 550 ENSP00000336606/1-910 EPSASEEEKE LGERRAAELT CLTGLFILRR TQEIINKYLP PKIENVVFCR ENSBTAP00000000833/1-909 QPSASEEERE LGEQRAAELT CLTGLFILRR TQEVINQYLP PKIENVVFCR ENSTTRP00000005969/1-909 QPSASEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XKIENVVFCR bmy_20620T0/1-655 QPSASEEEKG LGERRAAELT CLTGLFVLRR TQEVINKYLP PKIENVVFCR BACU000491/1-909 QPSASEEEKE LGERRAAELT CLTGLFVLRR TQEVINKYLP PKIENVVFCR 551 600 ENSP00000336606/1-910 PGALQIELYR KLLNSQVVRF CLQGLLENSP HLICIGALKK LCNHPCLLFN ENSBTAP00000000833/1-909 PGALQIALYR KLLNSQAVRF CLQGLLENTS HLICIGALKK LCNHPCLLFG ENSTTRP00000005969/1-909 AGALQIELYR KLLNSQAVRF CLQGLLENSS HLICIGALKK LCNHPCLLFS bmy_20620T0/1-655 PGALQIELYR KLLDSQAVRF CLQGLLENSS HLICIGALKK LCNHPCLLFS BACU000491/1-909 PGALQIELYR KLLNSQAVRF CLQGLLENSS HLICIGALKK LCNHPCLLFS 601 650 ENSP00000336606/1-910 SIKEKECSST CDKNEEKSLY KGLLSVFPAD YNPLLFTEKE SGKLQVLSKL ENSBTAP00000000833/1-909 SIKEKESNST WDESEERNLY EGLMNVFPAD YNPIMFTEEE SGKLQVLSKL ENSTTRP00000005969/1-909 SVKEKECSST WDENEERNLY ERLINVFPAD YNPLMFAEEE SGKLQVLSKL bmy_20620T0/1-655 SVKEKECSST WDENEERNLY EGLINVFPAD YNPLMFTEEE SGKLQVLSKL BACU000491/1-909 SVKEKECSST WDENEERNLY EGLINVFPAD YNPLMFTEEE SGKLQVLSKL 651 700 ENSP00000336606/1-910 LAVIHELRPT EKVVLVSNYT QTLNILQEVC KRHGYAYTRL DGQTPISQRQ ENSBTAP00000000833/1-909 LAVIRELRPA EKVVLVSNYT RTLDILQEVC KRHGYAYTRL DGQTPISQRQ ENSTTRP00000005969/1-909 LAVIHELCPD EKVVLVSNYT QTLNILQEVC KRHGYAYTRL DGQTQISQRQ bmy_20620T0/1-655 LAVIHELRPG EKVVLVSNYT QTLNILQE-- ---------- ---------- BACU000491/1-909 LAVIHELRPG EKVVLVSNYT QTLNILQEVC KRHGYAYTRL DGQTQVSQRQ 701 750 ENSP00000336606/1-910 QIVDGFNSQH SSFFIFLLSS KAGGVGLNLI GGSHLILYDI DWNPATDIQA ENSBTAP00000000833/1-909 QIVDGFNSKY SSDFIFLLSS KAGGVGLNLI GGSHLILYDI DWNPATDIQA ENSTTRP00000005969/1-909 QIVDGFNSKY SSDFIFLLSS KAGGVGLNLI GGSHLILYDI DWNPATDIQA bmy_20620T0/1-655 ---------- ---------- ---------- ---------- ---------A BACU000491/1-909 QIVDGFNSKY SSDFIFLLSS KAGGVGLNLI GGSHLILYDI DWNPATDIQA 751 800 ENSP00000336606/1-910 MSRVWRDGQK YPVHIYRLLT TGTIEEKIYQ RQISKQGLCG AVVDLTKTSE ENSBTAP00000000833/1-909 MSRVWRDGQK HPVHIYRLLT TGTIEEKIYQ RQISKQGLSG AVVDLSKTSD ENSTTRP00000005969/1-909 MSRVWRDGQK HPVHIYRLLT TGTIEEKIYQ RQISKQGLSG AVVDLTKTCD bmy_20620T0/1-655 MSRVWRDGQK HPVHIYRLLT TGTIEEKIYQ RQISKQGLSG AVVDLTKTCD BACU000491/1-909 MSRVWRDGQK HPVHIYRLLT TGTIEEKIYQ RQISKQGLSG AVVDLTKTCD 801 850 ENSP00000336606/1-910 HIQFSVEELK NLFTLHESSD CVTHDLLDCE CTGEEVHTGD SLEKFIVSRD ENSBTAP00000000833/1-909 HIQFSVEELK NLFTLHESSH CVTHDLLDCE CTGEN-HTGD SLEKLPVSRN ENSTTRP00000005969/1-909 HIQFSVEELK NLFTLHESSH CVTHDLLDCE CTGEN-YTGD SLEKFPVFRN bmy_20620T0/1-655 HIQFSVEELK NLFTLHESSH CVTHDLLDCE CTGEN-HTGD SLEKFPVFRN BACU000491/1-909 HIQFSVEELK NLFTLHESSR CVTHDLLDCE CTGEN-HTGD SLEKFPVFRN 851 900 ENSP00000336606/1-910 CQLGPHHQKS NSLKPLSMSQ LKQWKHFSGD HLNLTDPFLE RITENVSFIF ENSBTAP00000000833/1-909 CQLGPHQQKS DSLKPLSMSQ LKQWRHFPGD HLNLTDPFLE RIRENVSFFF ENSTTRP00000005969/1-909 CQLGTHQQKS DSLKPVSMSQ LKQWKHFSGD HLNLTDPFLE RIRENVSFFF bmy_20620T0/1-655 CQLGTHQQKS DSLKPVSMSQ LKQWKHFSGD HLNLTDPFLE RIRENVSFFF BACU000491/1-909 YQLGTHQQKS DSLKPVSMSQ LKQWKHFSGD HLNLTDPFLE RIRENVSFFF 901 950 ENSP00000336606/1-910 QNITTQATGT ENSBTAP00000000833/1-909 QNITNQTTAI ENSTTRP00000005969/1-909 QNITNQTTAI bmy_20620T0/1-655 QNITNQTTAM BACU000491/1-909 QNITNQTTAI