KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:22 2014 Check: 00 .. Name: ENSP00000264605/1-600 Len: 682 Check: 499 Weight: 1.00 Name: ENSBTAP00000000837/1-584 Len: 682 Check: 9179 Weight: 1.00 Name: ENSTTRP00000005841/1-557 Len: 682 Check: 8525 Weight: 1.00 Name: bmy_18841T0/1-494 Len: 682 Check: 4381 Weight: 1.00 Name: BACU011005/1-587 Len: 682 Check: 6580 Weight: 1.00 // 1 50 ENSP00000264605/1-600 MGKKLDLSKL TDEEAQHVLE VVQRDFDLRR KEEERLEALK GKIKKESSKR ENSBTAP00000000837/1-584 MGKTLDLSKL TDEEAKHVWE VVQRDFNLRR KEEERLEGLK GKIKKENSKR ENSTTRP00000005841/1-557 ---------- ---------- ---------- -------GLK GKIKKENSKR bmy_18841T0/1-494 ---------- ---------- ---------- ---------- ---------- BACU011005/1-587 MGKKLDLSTL TDEEAKHVWE VVQRDFDLRR KEEERLEGLK GKIKQENSKR 51 100 ENSP00000264605/1-600 ELLSDTAHLN ETHCARCLQP YQLLVNSKRQ CLECGLFTCK SCGRVHPEEQ ENSBTAP00000000837/1-584 ELLSDTAHLN NTHCARCLQP YRLLETPKRQ CLDCHLFTCR GCGHPHPEEQ ENSTTRP00000005841/1-557 ELLSDTAHLS NTHCARCLQP YRLLETPKRQ CLDCGLLTCK GCGH-NPEEQ bmy_18841T0/1-494 ---------- ---------- ---------- ---------- ---------- BACU011005/1-587 ELLPDTAHLS NTHCARCLLP YRLLETPKRQ CLDCGLFTCK GCGH-TPEEQ 101 150 ENSP00000264605/1-600 GWICDPCHLA RVVKIGSLEW YYEHVKARFK RFGSAKVIRS LHGRLQG--- ENSBTAP00000000837/1-584 GWLCDPCHLA RVVKMGSLEW YYSHVRARFK SFGSAQVVRS LCGRLQGAGL ENSTTRP00000005841/1-557 GWLCDPCHLA RLVKRGSLEW YYRHVRARFQ HSGGAQVARS LCGRLQG--- bmy_18841T0/1-494 ---------- ---------- ---------- --MQASV--- ---------- BACU011005/1-587 GWLCDPCHLA RQVKRGSLEW YYGHVRARFK RFGGAQVVRS LCGRLQGAGL 151 200 ENSP00000264605/1-600 ---------- GAGPELISEE RSGDSDQTDE DGEPGSEAQA QAQPFGSKKK ENSBTAP00000000837/1-584 PDGVRSAPDV HSGPEQMPGH PSGEEEQTDE DGE--GDTAA QAQPLGSQKK ENSTTRP00000005841/1-557 ---------- AGGPEPGPGG RSGDSEHTDE DRE--QDTGA QAQPVGSKKK bmy_18841T0/1-494 ---------- AGGPEPGPGG RSGDSEKTDE DRE--QDTVA EAQPAGSKKK BACU011005/1-587 PDQVQSSPDV NSGPEPGPGG KSGDSEKTDE DRE--QDTVA QAQPAGSKKK 201 250 ENSP00000264605/1-600 RLLSVHDFDF EGDSDDSTQP QGHSLHLSSV PEARDSPQSL TDESCSEKAA ENSBTAP00000000837/1-584 RLLPIHGWDF EADSDDSDPF CGHPPSLSSV SGATDGLQAL TDDPCAEETT ENSTTRP00000005841/1-557 RVLPVHGLDF EADSDDSTPS CGHPPSLSLV SVAADNPQAL TDEPCAEETT bmy_18841T0/1-494 RVLPVHGLDF EADSDDSTPS CGPPPSLSLV SGAADNLQAL TGEPCTEETT BACU011005/1-587 RVLPVHGLDF EADSDDSTPS CGPPPSLSLV SGAADNLQAL TDEPCTEETT 251 300 ENSP00000264605/1-600 PHKAEGLEEA DTGASGCHSH PEEQPTSISP SRHGALAELC PPGGSHRMAL ENSBTAP00000000837/1-584 SQEAGILDQA DARAPGCHPR PEEQRISLSP AGPDELSELC LPGESCTAGP ENSTTRP00000005841/1-557 SQEP--VDEA DARASGCHPR PEGQMASLSP AGPDALAELC LPGESCMMAP bmy_18841T0/1-494 SQEPVVLDEA DARASGCHPC PEGQMASLSP AGPDALAELC LPGESCTTAP BACU011005/1-587 SQEPVVLDEA DARASGCHPC PEGQMASLSP AGPDALAELC LPGESCTTAP 301 350 ENSP00000264605/1-600 GTAAALGSNV IRNEQLPLQY LADVDTSDEE SIRAHVMASH HSKRRGRASS ENSBTAP00000000837/1-584 GVAATPGTNI LRNEQLPSQY LADVDTSDEE SIWIQRVASH HPRQKGWTAS ENSTTRP00000005841/1-557 GTTATPGTNV LWNEQLPSHY LADVDTSDEE SVWAQRVSSH HPRRRGQTLS bmy_18841T0/1-494 GTTATPGTNV LGNEQLPSHY LADVDTSDEE SIWAQRVASH HPRRRGQTLS BACU011005/1-587 GTTATPGIHV LGNEQLPSHY LADVDTSDEE SIWAQRVASH HPRRRGQTLS 351 400 ENSP00000264605/1-600 ESQIFELNKH ISAVECLLTY LENTVVPPLA KGLGAGVRTE ADVEEEALRR ENSBTAP00000000837/1-584 ESQ------- ---------- ---------- -HPGGDEPTD ADAEEAALKR ENSTTRP00000005841/1-557 EKQXXXXXXX XXXXXXXXXX XXXXXXXXXX XCPVGSKPTG ADMEEAALKR bmy_18841T0/1-494 ENQ------- ---------- ---------- -CPAGSKPTD ADMEEVALRR BACU011005/1-587 ENQ------- ---------- ---------- -CPTGSKPTD ADVEEVALRR 401 450 ENSP00000264605/1-600 KLEELTSNVS DQETSS-EEE EAKDEKAEPN RDKSVGPLPQ ADPEVGTAAH ENSBTAP00000000837/1-584 KLEELTSHIS DQGASSAEEE EGMDAGAEMG RSKTVEDHPG ATREVRTAAG ENSTTRP00000005841/1-557 RLEALISRAG DQRASS--EE EGKDGGAEHG SSVPSEDPPG AAPEVCTAAG bmy_18841T0/1-494 KLEDLISHVS DQRASS--EE EGEADGAEPG GSTHIEPLPG AAQEVCMAAG BACU011005/1-587 RLEDLISHVS DQRASS--EE EGEGDGAEPG GSTPVEHLPG AAQEVCTAAG 451 500 ENSP00000264605/1-600 QTNRQEKSPQ DPGDPVQYNR TTDEELSELE DRVAVTASEV QQAESEVSDI ENSBTAP00000000837/1-584 QTPSRGKDPL SPGDPEQPSR TTEAELAELE GRVAATTCEV RRTESQVSNI ENSTTRP00000005841/1-557 QTPSREKGAR GPQDPMQPSR TTDEELSQLE DRVAAAASQV QRTESKVSDI bmy_18841T0/1-494 QTPSREKGPR GPQDPVQPSR TTDKELSQLE DRVAATASEV QRTESEVSDI BACU011005/1-587 QMPSREKGPR GPQDPVQPSW TTDKELSQLE DRVAATASEV QRTENEVSDI 501 550 ENSP00000264605/1-600 ESRIAALRAA GLTVKPSGKP RRKS-NLPIF LPRVAGKLGK RPEDPNADPS ENSBTAP00000000837/1-584 KSRIAALQAA GLTVRPSGTP QRKS-NLPIF LPRLVRKSGQ SLKDPNADPL ENSTTRP00000005841/1-557 EYRIAALQAA GLTVRTSTKP RKKSXXXXVF LPQLVGKLGQ SPKNPRADPS bmy_18841T0/1-494 ESRIAALQAA GLTVRTSAKP RRKS-NLPVF LPRLVGKFGQ SPKDPNADPS BACU011005/1-587 ESRIAALQAA GLTVRTSAKP RRKS-NLPVF LPRLVGKFGQ SPKDPNADPS 551 600 ENSP00000264605/1-600 SEAKAMAVPY LLRRKFSNSL KSQGKDDDSF DRKSVYRGSL TQRNPNARKG ENSBTAP00000000837/1-584 DEAEVEAVPC LVRRELSNYP KSQDKDDDSF SRKSMYRGSL TQRNPNGRKR ENSTTRP00000005841/1-557 DEVEVVTVPY PVRRKLSDHP RSQDKDDDSF DRNSVSR-SL TQRNPSGRKE bmy_18841T0/1-494 DEVKVVAAPY LVRGKLGNYP KSQDKDDDSF DRKSVSRGSL TQRNPNGRKG BACU011005/1-587 DEVKVVAVPY LVRGKLGNYP KSQDRDDDSF DRKSVSRGSL TQRNPNGRKG 601 650 ENSP00000264605/1-600 MASHTFAKPV V--------- ---------- ---------- ---------- ENSBTAP00000000837/1-584 ATNHSFAKPV M--------- ---------- ---------- ---------- ENSTTRP00000005841/1-557 TANHSIAKPV M--------- ---------- ---------- ---------- bmy_18841T0/1-494 TANQSFAIDM LILSFQSKEL GYTNRNSKIS ERSKGKLKTF LKGTQCTSDG BACU011005/1-587 TANHSFAKPV M--------- ---------- ---------- ---------- 651 700 ENSP00000264605/1-600 ---------- ----AHQS-- ---------- -- ENSBTAP00000000837/1-584 ---------- ----THQP-- ---------- -- ENSTTRP00000005841/1-557 ---------- ----THQP-- ---------- -- bmy_18841T0/1-494 VAWPWGALGL GTGTAHEAVR TPRAAPPARP AL BACU011005/1-587 ---------- ----THQALK ERFV------ --