KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:32 2014 Check: 00 .. Name: BACU015498/1-335 Len: 569 Check: 4203 Weight: 1.00 Name: bmy_16209T0/1-548 Len: 569 Check: 8905 Weight: 1.00 Name: ENSP00000299824/1-567 Len: 569 Check: 3080 Weight: 1.00 Name: ENSBTAP00000000858/1-568 Len: 569 Check: 9600 Weight: 1.00 Name: ENSTTRP00000007277/1-568 Len: 569 Check: 8229 Weight: 1.00 // 1 50 BACU015498/1-335 MASHVDLLTE LQLLEKVP-T LERLRAAQKR RAQQLKKWAQ YEQDLQHRKR bmy_16209T0/1-548 ---MSPLARR LGGGLNLPFT GVSVHTQAKG ATGALGPGAG TNEDGPHPRC ENSP00000299824/1-567 MASHVDLLTE LQLLEKVP-T LERLRAAQKR RAQQLKKWAQ YEQDLQHRKR ENSBTAP00000000858/1-568 MASHVDLLTE LQLLEKVP-T LERLRAAQKR RAQQLKKWAQ YEQDLQHRKR ENSTTRP00000007277/1-568 MATHVDLLTE LQLLEKVP-T LERLRAAQKR RAQQLKKWAQ YEQDLQHRKR 51 100 BACU015498/1-335 KHERKRSTGG RRKKVSFEAS VALLEASLRN DAEEVRYFLK NKVSPDLCNE bmy_16209T0/1-548 SRD------- ---------- -LIFFPSTRC GCRAVRYFLK NKVSPDLCNE ENSP00000299824/1-567 KHERKRSTGG RRKKVSFEAS VALLEASLRN DAEEVRYFLK NKVSPDLCNE ENSBTAP00000000858/1-568 KHERKRSTGG RRKKVSFEAS VALLEASLRN DAEEVRYFLK NKVSPDLCNE ENSTTRP00000007277/1-568 KHERKRSTGG RRKKVSFEAS VALLEASLRN DAEEVRYFLK NKVSPDLCNE 101 150 BACU015498/1-335 DGLTALHQCC IDNFEEIVKL LLSHGANVNA KDNELWTPLH AAATCGHINL bmy_16209T0/1-548 DGLTALHQCC IDNFEEIVKL LLSHGANVNA KDNELWTPLH AAATCGHINL ENSP00000299824/1-567 DGLTALHQCC IDNFEEIVKL LLSHGANVNA KDNELWTPLH AAATCGHINL ENSBTAP00000000858/1-568 DGLTALHQCC IDNFEEIVKL LLSHGANVNA KDNELWTPLH AAATCGHINL ENSTTRP00000007277/1-568 DGLTALHQCC IDNFEEIVKL LLSHGANVNA KDNELWTPLH AAATCGHINL 151 200 BACU015498/1-335 VKILVQYGAD LLAVNSDGNM PYDLCEDEPT LDVIETCMAY QGITQEKINE bmy_16209T0/1-548 VKILVQYGAD LLAVNSDGNM PYDLCEDEPT LDVIETCMAY QGITQEKINE ENSP00000299824/1-567 VKILVQYGAD LLAVNSDGNM PYDLCEDEPT LDVIETCMAY QGITQEKINE ENSBTAP00000000858/1-568 VKILVQYGAD LLAVNSDGNM PYDLCEDEPT LDVIETCMAY QGITQEKINE ENSTTRP00000007277/1-568 VKILVQYGAD LLAVNSDGNM PYDLCEDEPT LDVIETCMAY QGITQEKINE 201 250 BACU015498/1-335 KRAAPEQQMI SDIHCMIAAG QDLDWIDAQG ATLVR----- ---------- bmy_16209T0/1-548 KRAAPEQQMM SDIHCMIAAG QDLDWVDAQG ATLLHIXGAN GYLRAAELLL ENSP00000299824/1-567 MRVAPEQQMI ADIHCMIAAG QDLDWIDAQG ATLLHIAGAN GYLRAAELLL ENSBTAP00000000858/1-568 MRAAPEQQMI SDIHCMIAAG QDLDWVDAQG ATLLHIAGAN GYLRAAELLL ENSTTRP00000007277/1-568 KRAAPEQQMI SDIHCMIAAG QDLDWIDAQG ATLLHIAGAN GYLRAAELLL 251 300 BACU015498/1-335 -RGARLDWAG GSGPEPRPAR TELGQCRWRP SLYSWGLS-- -------MAL bmy_16209T0/1-548 DHGVRVDVKD WDGWEPLHAA AFWGQMQMAE LLVSHGASLS ARTSMDEMPI ENSP00000299824/1-567 DHGVRVDVKD WDGWEPLHAA AFWGQMQMAE LLVSHGASLS ARTSMDEMPI ENSBTAP00000000858/1-568 DHGVRVDVKD WDGWEPLHAA AFWGQMQMAE LLVSHGASLS ARTSMDEMPI ENSTTRP00000007277/1-568 DHGVRVDVKD WDGWEPLHAA AFWGQMQMAE LLVSHGASLS ARTSMDEMPI 301 350 BACU015498/1-335 DL-------- ---------- ---------- ---------- ---------- bmy_16209T0/1-548 DLCEEEEFKV LLLELKHKHD VIMKSQLRHK SSLSRRTSSA GSRGKVVRRA ENSP00000299824/1-567 DLCEEEEFKV LLLELKHKHD VIMKSQLRHK SSLSRRTSSA GSRGKVVRRA ENSBTAP00000000858/1-568 DLCEEEEFKV LLLELKHKHD VIMKSQLRHK SSLSRRTSSA GSRGKVVRRA ENSTTRP00000007277/1-568 DLCEEEEFKV LLLELKHKHD VIMKSQLRHK SSLSRRTSSA GSRGKVVRRA 351 400 BACU015498/1-335 ---------- ---------- ---------- ---------- ---------- bmy_16209T0/1-548 SLSDRTNLYR KEYEGEAILW QQRSAAEDQR TSIYNGDIRE TRTDQENKDP ENSP00000299824/1-567 SLSDRTNLYR KEYEGEAILW -QRSAAEDQR TSTYNGDIRE TRTDQENKDP ENSBTAP00000000858/1-568 SLSDRTNLYR KEYEGEAILW QQRSASEDQR NSTYNGDIRE TRTDQENKDP ENSTTRP00000007277/1-568 SLSDRTNLYR KEYEGEAILW QQRSAADDQR TSTYNGDIRE TRTDQENKDP 401 450 BACU015498/1-335 -PHLLGP--- -----GVPPG MWEVS----- RAGLSRFE-- ---------- bmy_16209T0/1-548 NPRLEKPVLL SEFPTKIPRS EMDVPVENGL RAPVSTYQYA LSNGDVWKVH ENSP00000299824/1-567 NPRLEKPVLL SEFPTKIPRG ELDMPVENGL RAPVSAYQYA LANGDVWKVH ENSBTAP00000000858/1-568 NPRLEKPVLL SEFPTKIPHS DMDMPVENGL RAPVSTYQYA LCNGDVWKVH ENSTTRP00000007277/1-568 NPRLEKPVLL SEFPTKIPRS EMDVPVENGL RAPVSTYQYA LSNGDVWKVH 451 500 BACU015498/1-335 ---KLGLGVG SPG------- WEAWLCHSP- ---------- ---LLSRSFS bmy_16209T0/1-548 EVPDYNMAYG NPGMADATPP WSGYKEQSPQ TLLELKRQRA AAKLLSHPFL ENSP00000299824/1-567 EVPDYSMAYG NPGVADATPP WSSYKEQSPQ TLLELKRQRA AAKLLSHPFL ENSBTAP00000000858/1-568 EVPDYSMAYG NPGVADATPS WSGYKEQSPQ TLLELKRQRA AAKLLSHPFL ENSTTRP00000007277/1-568 EVPDYNMAYG NPGMADATPP WSGYKEQSPQ TLLELKRQRA AAKLLSHPFL 501 550 BACU015498/1-335 ---------- ---------- ---------- --------FT SSSRCPS--- bmy_16209T0/1-548 STHLGSGMAR TGEGSSEGKA PLIGGRTSPY SSNGTSVYYT VTSGDPPLLK ENSP00000299824/1-567 STHLGSSMAR TGESSSEGKA PLIGGRTSPY SSNGTSVYYT VTSGDPPLLK ENSBTAP00000000858/1-568 STHLGSGVSR TGEGSSEGKA PLIGGRTSPY SSNGTSVYYT VTSGDPPLLK ENSTTRP00000007277/1-568 STHLGSGMGR TGEGGSEGKA PLIGGRTSPY SSNGTSVYYT VTSGDPPLLK 551 600 BACU015498/1-335 ---------- --------- bmy_16209T0/1-548 FKAPMEEMEE KVHGCCRIS ENSP00000299824/1-567 FKAPIEEMEE KVHGCCRIS ENSBTAP00000000858/1-568 FKAPIEEMEE KVHGCCRIS ENSTTRP00000007277/1-568 FKAPMEEMEE KVHGCCRIS