KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:39 2014 Check: 00 .. Name: bmy_18913T0/1-333 Len: 547 Check: 1255 Weight: 1.00 Name: ENSTTRP00000002287/1-517 Len: 547 Check: 8612 Weight: 1.00 Name: ENSBTAP00000000874/1-547 Len: 547 Check: 7927 Weight: 1.00 Name: ENSP00000358515/1-547 Len: 547 Check: 7329 Weight: 1.00 Name: BACU018625/1-516 Len: 547 Check: 1478 Weight: 1.00 // 1 50 bmy_18913T0/1-333 ---------- ---------- ---------- MTATKSDVQK L--------- ENSTTRP00000002287/1-517 ---------- ---------- ---------L YVATEAILIA LVGATPSYHW ENSBTAP00000000874/1-547 MEVEEAFQAV GEMGIYQMYL CFLLAVLLQL YVATEAILIA LVGATPSYHW ENSP00000358515/1-547 MEVEEAFQAV GEMGIYQMYL CFLLAVLLQL YVATEAILIA LVGATPSYHW BACU018625/1-516 ---------- ---------- ---------L YVATEAILIA LVGATPSYHW 51 100 bmy_18913T0/1-333 SCQDLYQSCL TGNTREGEKL DV-LWAMMTG ---------- -------CQS ENSTTRP00000002287/1-517 DLTELLPNQS HSNWSAG-DQ ALGAWLLTAN XXXXXXXXXX XXXXXXXXXX ENSBTAP00000000874/1-547 DLAELLPNQS HSNQSAGEDQ ALGAWLLTAN GSEMHKHVHF SSSFTSIASE ENSP00000358515/1-547 DLAELLPNQS HGNQSAGEDQ AFGDWLLTAN GSEIHKHVHF SSSFTSIASE BACU018625/1-516 DLAELLPNQS HSNRSAGEDQ ALGAWLLMAN GSEMHKHVHF SSSFTSIASE 101 150 bmy_18913T0/1-333 WFLIANRSYK VSAASSFFFS GVFVGVISFG QLSDRFGRKK VYLTGFALDI ENSTTRP00000002287/1-517 WFLIANRSYK VSAASSFFFS GVFVGVISFG QLSDRFGRKK VYLTGCALDI ENSBTAP00000000874/1-547 WFLIANRSYK VSAASSFFFS GVFVGVITFG QLSDRFGRKK VYLTGFALDI ENSP00000358515/1-547 WFLIANRSYK VSAASSFFFS GVFVGVISFG QLSDRFGRKK VYLTGFALDI BACU018625/1-516 WFLIANRSYK VSAASSFFFS GVFVGVISFG QLSDRFGRKK VYLTGFALDI 151 200 bmy_18913T0/1-333 LFAIANGFSP SYEFFAITRF LVGVMNGGMS LVAFVLLNEC VGTAYWALAG ENSTTRP00000002287/1-517 LFAIANGFSP SYEFFAVTRF LVGVMNGGMS LVAFVLLNEC VGTAYWALAG ENSBTAP00000000874/1-547 LFAIANGFSP SYEFFAVTRF LVGMMNGGMS LVAFVLLNEC VGTAYWALAG ENSP00000358515/1-547 LFAIANGFSP SYEFFAVTRF LVGMMNGGMS LVAFVLLNEC VGTAYWALAG BACU018625/1-516 LFAIANGFSP SYEFFAMTRF LVGVMNGGMS LVAFV--NEC VGTAYWALAG 201 250 bmy_18913T0/1-333 SIGGLFFAVG IAQYALLGYF IRSWRTLAIL VNLQGTVVFL LSLFIPESPR ENSTTRP00000002287/1-517 SIGGLFFAVG IAQYALLGYF IRSWRTLAIL VNLQGTVVFL LSLFIPESPR ENSBTAP00000000874/1-547 SIGGLFFAVG IAQYALLGYF IRSWRTLAIL VNLQGTVVFL LSLSIPESPR ENSP00000358515/1-547 SIGGLFFAVG IAQYALLGYF IRSWRTLAIL VNLQGTVVFL LSLFIPESPR BACU018625/1-516 SIGGLFFAVG IAQYALLGYF IRSWRTLAIL VNLQGTVVFL LSLFIPESPR 251 300 bmy_18913T0/1-333 WLYSQGRLRE AEAALHLIAK RNRQLKCTFS LTHPANRSCK ETGSFLDLFR ENSTTRP00000002287/1-517 WLYSQGRLRE AEAALHLIAK RNRQLKCTFS LTHPDNRSCR ETGSVLDLFR ENSBTAP00000000874/1-547 WLYSQGRLLE AEAALRLIAK RNRQLRCSFS LARPAGGSCE EAGSVLDLFR ENSP00000358515/1-547 WLYSQGRLSE AEEALYLIAK RNRKLKCTFS LTHPANRSCR ETGSFLDLFR BACU018625/1-516 WLYSQGRLRE AEAALHLIAK RNRQLKCTFS LTHPANRSCK ETGSFLDLFR 301 350 bmy_18913T0/1-333 YRVLLGHTLT LMFIWFVCSL VYYGLTLSAG DLGGNIYANL ALSGLIEIPS ENSTTRP00000002287/1-517 YRVLLGHTLT LMFIWFVCSL VYYGLTLSAG DLGGNIYANL ALSGLIEIPS ENSBTAP00000000874/1-547 RRVLLGHTLT LMFIWFVCSL VYYGLTLSAG DLGGNIYANL ALSGLIEIPS ENSP00000358515/1-547 YRVLLGHTLI LMFIWFVCSL VYYGLTLSAG DLGGSIYANL ALSGLIEIPS BACU018625/1-516 YRVLLGHTLT LMFIWFVCSL VYYGLTLSAG DLGGNIYANL ALSGLIEIPS 351 400 bmy_18913T0/1-333 YPICIYLINQ KWFGRKRTLA AFLCLGGLAC LIVMFLPEKK ---------- ENSTTRP00000002287/1-517 YPICIYLINQ KWFGRKRTLA TFLCLGGLAC LIVMFLPEKK DTGVFAVVNS ENSBTAP00000000874/1-547 YPVCIYLINQ RWFGRKRTLA AFLCLGGLAC LIVMFLPEKK DTGVFAVVNS ENSP00000358515/1-547 YPLCIYLINQ KWFGRKRTLS AFLCLGGLAC LIVMFLPEKK DTGVFAVVNS BACU018625/1-516 YPICIYLINQ KWFGRKRTLA AFLCLGGLAC LIVMFLPEKK DTGVFAVVNS 401 450 bmy_18913T0/1-333 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002287/1-517 HSLSLLGKLT ISAAFNVVYI YTSELYPTVI RNVGLGTCSM FSRVGGIIAP ENSBTAP00000000874/1-547 HSLSLLGKLT ISAAFNIVYI YTSELYPTVI RNVGLGTCSM FSRVGGIIAP ENSP00000358515/1-547 HSLSLLGKLT ISAAFNIVYI YTSELYPTVI RNVGLGTCSM FSRVGGIIAP BACU018625/1-516 RSLSLLGKLT ISAAFNVVYI YTSELYPTVI RNVGLGTCSM FSRVGGIIAP 451 500 bmy_18913T0/1-333 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002287/1-517 FIPSLKYVQW SLPFIVFGAT GLTSGLLSLL LPETLNSPLL ETFSDLQVYS ENSBTAP00000000874/1-547 FIPSLKYVQW SLPFIVFGAT GLTSGLLSLL LPETLNSPLL ETFSDLQVYS ENSP00000358515/1-547 FIPSLKYVQW SLPFIVFGAT GLTSGLLSLL LPETLNSPLL ETFSDLQVYS BACU018625/1-516 FIPSLKYVQW SLPFIVFGAT GLTSGLLSLL LPETLNSPLL ETFSDLQVYS 501 550 bmy_18913T0/1-333 ---------- ---------- ---------- ---------- ------- ENSTTRP00000002287/1-517 YRRLGEEALS LQTLDPPQSV DKESPLGSES EEEEEFYDAD EETQMIK ENSBTAP00000000874/1-547 YRRLGEEALS LQTLDPPQSV DKESPLGSES DEEEEFYDAD EETQMIK ENSP00000358515/1-547 YRRLGEEALS LQALDPQQCV DKESSLGSES EEEEEFYDAD EETQMIK BACU018625/1-516 YRRLGEETLS LQTLDPPQSV DKESPLGSES EEEEEFYDAD EETQMIK