KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:40 2014 Check: 00 .. Name: ENSTTRP00000000677/1-557 Len: 573 Check: 8530 Weight: 1.00 Name: ENSBTAP00000000897/1-556 Len: 573 Check: 3814 Weight: 1.00 Name: ENSP00000262764/1-556 Len: 573 Check: 4111 Weight: 1.00 Name: bmy_13149T0/1-569 Len: 573 Check: 7543 Weight: 1.00 Name: BACU011569/1-510 Len: 573 Check: 3833 Weight: 1.00 // 1 50 ENSTTRP00000000677/1-557 MAAAATAAAA AAGPVFWRRL LGLLPGRPGL AALLGRLSDR LGRNRDRRRR ENSBTAP00000000897/1-556 ---MAAAAAA AAGPVFWRRL LGLLPGRPGL AALLGRLSDR LGRNPDRRRR ENSP00000262764/1-556 ---MAVAAAA AAGPVFWRRL LGLLPGRPGL AALLGRLSDR LGRNRDRQRR bmy_13149T0/1-569 ----MAAVAA AAGPVFWRRL LGLLPGRPGL AALLGRLSDR LGRNRDRRRR BACU011569/1-510 ---------- ---------- ---------- ---------- ---------P 51 100 ENSTTRP00000000677/1-557 RPPWLLLAPL LSPAVPHVTS PPCCLCPEGV HRFQWIRNLV PEFGVSSSHV ENSBTAP00000000897/1-556 RSPWLLLAPL LSPAVPVVTS PPCCLCAEGV HRFQWIRNLV PEFGVSSSHV ENSP00000262764/1-556 RSPWLLLAPL LSPAVPQVTS PPCCLCPEGV HRFQWIRNLV PEFGVSSSHV bmy_13149T0/1-569 RPPWLLLAPL LSPAVPHVTS PPCCLCPEGV HRFQWIRNLV PEFGVSSSHV BACU011569/1-510 RPPWLLLAPL LSPAVPHVTS PPCCLCPEGV HRFQWIRNLV PEFGVSSSHV 101 150 ENSTTRP00000000677/1-557 RVLSSPAEFF ELMKGQIKVA KRRVVMASLY LGTGPLEQEL VDCLESTLEK ENSBTAP00000000897/1-556 RVLSSPAEFF ELMKGQIKVA KRRVVMASLY LGIGPLEQEL VDCLESTLEK ENSP00000262764/1-556 RVLSSPAEFF ELMKGQIRVA KRRVVMASLY LGTGPLEQEL VDCLESTLEK bmy_13149T0/1-569 RVLSSPAEFF ELMKGQIKVA KRRVVMASLY LGTGPLEQEL VDCLESTLEK BACU011569/1-510 RVLSSPAEFF ELMKGQIKVA KRRVVMASLY LGTGPLEQEL VDCLESALEK 151 200 ENSTTRP00000000677/1-557 SLQTKFPSDL RVSILLDFTR GSRGRKNSRT MLLPLLQRFP EQVRVSLFHT ENSBTAP00000000897/1-556 SLQAKFPSGL RVSILLDFTR GSRGRKNSRT MLLPLLQRFP EQVRVSLFHT ENSP00000262764/1-556 SLQAKFPSNL KVSILLDFTR GSRGRKNSRT MLLPLLRRFP EQVRVSLFHT bmy_13149T0/1-569 SLQAKFPSDL RVSILLDFMR GSRGRKNSRT MLLPLLQRFP EQVRVSLFHT BACU011569/1-510 SLQAKFPSDL RVSILLDFTR GSRGRKNSRT MLLPLLQRFP EQVRVSLFHT 201 250 ENSTTRP00000000677/1-557 PNLRGLLRLL IPERFNETIG LQHIKVYLFD NSVVLSGXXX XXXXXXXXXX ENSBTAP00000000897/1-556 PNLRGLLRLL IPERFNETIG LQHIKVYLFD NNVILSGANL SDSYFTNRQD ENSP00000262764/1-556 PHLRGLLRLL IPERFNETIG LQHIKVYLFD NSVILSGANL SDSYFTNRQD bmy_13149T0/1-569 PNLRGLLRLL IPERFNETIG LQHIKVYLFD NSVILSGANL SDSYFTNRQD BACU011569/1-510 PNLRGLLRLL IPERFNETIG LQHIKVYLFD NSVILSGANL SDSYFTNRQD 251 300 ENSTTRP00000000677/1-557 XXVFLQDCPE IADFFTELVD AVGDVS-QLQ GDDTVQVVEG MVH-YKGDRA ENSBTAP00000000897/1-556 RYVFLQDCPE IADFFTELVD AVGDVSLQLQ GDDTVQMVEG MVHPYKGDRA ENSP00000262764/1-556 RYVFLQDCAE IADFFTELVD AVGDVSLQLQ GDDTVQVVDG MVHPYKGDRA bmy_13149T0/1-569 RYVFLQDCPE IADFFTELVD AVGDVSLQLR GDDTVQVVEG MVHPYKGDRA BACU011569/1-510 RYVFLQDCPE IADFFTELVD AVGDVSLQLR GDDTVQVVEG MVHPYKGDRA 301 350 ENSTTRP00000000677/1-557 AYCKAASKRV MDVINSARTR QQMLHAQTFH SNSLLTQEDA AAAGDQRPAP ENSBTAP00000000897/1-556 AYCRAANKRV MDVINSARMR QQMLHAQTFH SDPLLTQEDA AAAGDRRPAP ENSP00000262764/1-556 EYCKAANKRV MDVINSARTR QQMLHAQTFH SNSLLTQEDA AAAGDRRPAP bmy_13149T0/1-569 AYCKAANKRV MDVINSARTR QQMLHAQTFH SNSLLTQEDA AAAGDRRPAP BACU011569/1-510 AYCKAANKRV MDVINSARTR QQMLHAQTFH SNSLLTQEDA AAAGDRRPAP 351 400 ENSTTRP00000000677/1-557 DTWIYPLIQM KPFEIQIDEI VTETLLTEAE RGAKVYLTTG YFNLTQAYMD ENSBTAP00000000897/1-556 DTWIYPLIQM KPFEIQIDEI VTETLLTEAE RGAKVYLTTG YFNLTQAYMD ENSP00000262764/1-556 DTWIYPLIQM KPFEIQIDEI VTETLLTEAE RGAKVYLTTG YFNLTQAYMD bmy_13149T0/1-569 DTWIYPLIQM KPFEIQIDEI VTETLLTEAE RGAKVYLTTG YFNLTQAYMD BACU011569/1-510 DTWIYPLIQM KPFEIQIDEI VTETLLTEAE RGAKVYLTTG YFNLTQAYMD 401 450 ENSTTRP00000000677/1-557 LVLGTRAEYQ ILLASPEVNG FFGAKGVAGA IPAAYVHIER QFYSEVCSLG ENSBTAP00000000897/1-556 LVLGTRAEYQ ILLASPEVNG FFGAKGVAGA IPAAYVHIER QFYSEVCSLG ENSP00000262764/1-556 LVLGTRAEYQ ILLASPEVNG FFGAKGVAGA IPAAYVHIER QFFSEVCSLG bmy_13149T0/1-569 LVLGTRAEYQ ILLASPEVNG FFGAKGVAGA IPAAYVHIER QFYSEVCSLG BACU011569/1-510 LVLGTRAEYQ ILLASPEVNG FFGAKGVAGA IPAAYVHIER QFYSEVCSLG 451 500 ENSTTRP00000000677/1-557 QQERVQLQEY WRRGWTFHAK ---------- ----GLWLYL AGSSLPCLTL ENSBTAP00000000897/1-556 QQERVQLQEY WRRDWTFHAK ---------- ----GLWLYL AGSSLPCLTL ENSP00000262764/1-556 QQERVQLQEY WRRGWTFHAK ---------- ----GLWLYL AGSSLPCLTL bmy_13149T0/1-569 QQERVQLQEY WRRGWTFHAK GESISVPEPT GQLAGLWLYL AGSSLPCLTL BACU011569/1-510 QQERVQLQEY WRRGWTFHAK ---------- ----GLWLYL AGSSLPCLTL 501 550 ENSTTRP00000000677/1-557 IGSPNFGYRS VHRDLEAQIA IVTESRALQQ QLHQEQAQLY LRSGAVSSAT ENSBTAP00000000897/1-556 IGSPNFGYRS VHRDLEAQIA IVTESRALQQ QLHQEQEQLY RRAGVVSSAT ENSP00000262764/1-556 IGSPNFGYRS VHRDLEAQIA IVTENQALQQ QLHQEQEQLY LRSGVVSSAT bmy_13149T0/1-569 IGSPNFGYRS VHRDLEAQIA IVTESRALQQ QLHQEQEQLY LRSGVVSSAT BACU011569/1-510 IGSPNFGYRS VHRDLEAQIA IVTESRALQQ QLHQEQEQLY LRSGVVSSAT 551 600 ENSTTRP00000000677/1-557 FEQPSRQVKL WVKMVTPLIK NFF ENSBTAP00000000897/1-556 FEQPSRQVKL WVKMVTPLIK NFF ENSP00000262764/1-556 FEQPSRQVKL WVKMVTPLIK NFF bmy_13149T0/1-569 FEQPSRQVKL WVKMVTPLIK NFF BACU011569/1-510 FEQPSRQVKL WVKMVTPLIK NFF