KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:44 2014 Check: 00 .. Name: ENSP00000421985/1-1166 Len: 1167 Check: 7111 Weight: 1.00 Name: ENSBTAP00000000917/1-1133 Len: 1167 Check: 7470 Weight: 1.00 Name: BACU013061/1-750 Len: 1167 Check: 890 Weight: 1.00 Name: bmy_08335T0/1-775 Len: 1167 Check: 3908 Weight: 1.00 Name: ENSTTRP00000012826/1-1160 Len: 1167 Check: 136 Weight: 1.00 // 1 50 ENSP00000421985/1-1166 MAPTLFQKLF SKRTGLGAPG RDARDPDCGF SWPLPEFDPS QIRLIVYQDC ENSBTAP00000000917/1-1133 ---------- ---------- ---------- SWPLPEFDPS QIRLIVYQDC BACU013061/1-750 ---------- ---------- ---------- ---------- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012826/1-1160 MAPTLFQKLF SKRSGLGAPG RDARDPDCAF SWPLPEFDPS QIRLIVYQDC 51 100 ENSP00000421985/1-1166 ERRGRNVLFD SSVKRRNEDI SVSKLGSDAQ VKVFGKCCQL KPGGDSSSSL ENSBTAP00000000917/1-1133 ERRGRNVLFD SSVKRKNEDI SVSKLCSDAQ VKVFGKCCQL KPGGDSSSSL BACU013061/1-750 ---------- ---------- ---------- ---------- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012826/1-1160 ERRGRNVLFD SSVKRKNEDI SVSKLCSDAQ VKV-GKCCQL KPGGD-SSSL 101 150 ENSP00000421985/1-1166 DSSVTSSSDI KDQCLKYQGS RCSSDANMLG EMMFGSVAMS YKGSTLKIHQ ENSBTAP00000000917/1-1133 DSSMTSSSDV KDQCPKYQGS RCSSDANMLG EMMFGSVAMS YKGSTLKIHQ BACU013061/1-750 ---------- ---------- ---------- -MMFGHVPS- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012826/1-1160 DSSMT-SSDV KDQCPKYQGS RCSSDANMLG EMMFGSVAMS YKGSTLKIHQ 151 200 ENSP00000421985/1-1166 IRSPPQLMLS KVFTARTGSS ICGSLNTLQD SLEFINQDNN TLKADNNTVI ENSBTAP00000000917/1-1133 IRSPPQLMLS KVFTARTGSS ICGSLNTLQD SLEFINQDNS TLKADNNTVI BACU013061/1-750 ---------- ---------- ---------- ---------- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- -MNFI----- ---------- ENSTTRP00000012826/1-1160 IRSPPQLMLS KVFTARTGSS ICGSLNTLQD SLEFINQDNS TLKADNNTII 201 250 ENSP00000421985/1-1166 NGLLGNIGLS QFCSPRRAFS EQGPLRLIRS ASFFAVHSNP MDMPGRELNE ENSBTAP00000000917/1-1133 NGLLGNIGLS QFCSPRRAFS EQGPLRLIRS ASFFAVHSNP MDMPGRELNE BACU013061/1-750 ---------- ---------- ---------- ---------- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012826/1-1160 NGLLGNIXXX XXXXXXXXXX XXXXXXXXXX XXXXXXHSNP MDMPGRELNE 251 300 ENSP00000421985/1-1166 DRDSGIARSA SLSSLLITPF PSPNSSLTRS CASSYQRRWR RSQTTSLENG ENSBTAP00000000917/1-1133 DRDSGIARSA SLSSLLITPF PSPNSSLTRS CASSYQRRWR RSQTTSLENG BACU013061/1-750 ---------- ---------- ---------- ---------- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012826/1-1160 DRDSGIARSA SLSSLLITPF PSPNSSLTRS CASSYQRRWR RSQTTSLENG 301 350 ENSP00000421985/1-1166 VFPRWSIEES FNLSDESCGP NPGIVRKKKI AIGVIFSLSK DEDENNKFNE ENSBTAP00000000917/1-1133 VFPRWSIEES FNLSDESCGP NPGIVRKKKI AIGVIFSLSK DEDESNKFNE BACU013061/1-750 ---------- ---------- ---------- ---LLYSV-- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---MCFRL-- ---------- ENSTTRP00000012826/1-1160 VFPRWSIEES FNLSEESCGP NPGIVRKKKI AIGVIFSLSK DEDESNKFNE 351 400 ENSP00000421985/1-1166 FFFSHFPLFE SHMNKLKSAI EQAMKMSRRS ADASQRSLAY NRIVDALNEF ENSBTAP00000000917/1-1133 FFFSHFPLFE SHMNKLKSAI EQAMKMSRRS ADASQRSLAY NRIVDALNEF BACU013061/1-750 ---------- ---------- ---------- ---------- ---------- bmy_08335T0/1-775 ---------- ---------- ---------- ---------- ---------F ENSTTRP00000012826/1-1160 FFFSHFPLFE SHMNKLKSAI EQAMKMSRRS ADASQRSLAY NRIVDALNEF 401 450 ENSP00000421985/1-1166 RTTICNLYTM PRIGEPVWLT MMSGTPEKNH LCYRFMKEFT FLMENASKNQ ENSBTAP00000000917/1-1133 RTTICNLYTM PRIGEPVWLT MMSGTPEKNQ LCHRFMKEFT FLMENASKNQ BACU013061/1-750 -TAFCLKFYE SRL------- ------ESDR M------NFV F--------R bmy_08335T0/1-775 RTTICNLYTM PRIGEPVWLT MMSGTPEKNQ LCHRFMKEFT FLMENASKNQ ENSTTRP00000012826/1-1160 RTTICNLYTM PRIGEPVWLT MMSGTPEKNQ LCHRFM-EFT FLMENASKNQ 451 500 ENSP00000421985/1-1166 FLPALITAVL TNHLAWVPTV MPNGQPPIKI FLEKHSSQSV DMLAKTHPYN ENSBTAP00000000917/1-1133 FLPALITAVL TNHLAWVPTV MPNGQPPIKI FLEKHSSQSV DMLAKTHPYN BACU013061/1-750 FLPALITAVL TNHLAWVPTV MPNGQPPIKI FLEKHSSQSV DMLAKTHPYN bmy_08335T0/1-775 FLPALITAVL TNHLAWVPTV MPNGQPPIKI FLEKHSSQSV DMLAKTHPYN ENSTTRP00000012826/1-1160 FLPALITAVL TNHLAWVPTV MPNGQPPIKI FLEKHSSQSV DMLAKTHPYN 501 550 ENSP00000421985/1-1166 PLWAQLGDLY GAIGSPVRLA RTVVVGKRQD MVQRLLYFLT YFIRCSELQE ENSBTAP00000000917/1-1133 PLWAQLGDLY GAIGSPVRLA RTVVVGKRQD MVQRLLYFLT YFIRCSELQE BACU013061/1-750 PLWAQLGDLY GAIGSPVRLA RTVVVGKRQD MVQRLLYFLT YFIRCSELQE bmy_08335T0/1-775 PLWAQLGDLY GAIGSPVRLA RTVVVGKRQD MVQRLLYFLT YFIRCSELQE ENSTTRP00000012826/1-1160 PLWAQLGDLY GAIGSPVRLA RTVVV-KRQD MVQRLLYFLT YFIRCSELQE 551 600 ENSP00000421985/1-1166 THLLENGEDE AIVMPGTVIT TTLEKGEIEE SEYVLVTMHR NKSSLLFKES ENSBTAP00000000917/1-1133 THLLENGEDE AIVMPGTVIT TTLEKGEIEE SEYVLITMHR NKSSLLFKES BACU013061/1-750 THLLENGDDE AIVMPGTVIT TTLEKGEIEE SEYVLITMHR NKNSLLFKES bmy_08335T0/1-775 THLLENGDDE AIVMPGTVIT TTLEKGEIEE SEYVLITMHR NKNSLLFKES ENSTTRP00000012826/1-1160 THLLENGDDE AIVMPGTVIT TTLEKGEIEE SEYVLITMHR NKNSLLFKES 601 650 ENSP00000421985/1-1166 EEIRTPNCNC KYCSHPLLGQ NVENISQQER EDIQNSSKEL LGISDECQMI ENSBTAP00000000917/1-1133 EETRTPNCNC KYCSRPLLGQ NMENVSRQER EDIQNSSKEL LGISNECQMI BACU013061/1-750 EETRTPNCNC KYCSRPLLGQ NIENVLRQER EDIQNSSKEL LGNSNERRMI bmy_08335T0/1-775 EETRTPNCNC KYCSRPLLGQ NIENVLRQER EDIQNSSKEL LGNSNECRMI ENSTTRP00000012826/1-1160 EETRTPNCSC KYCSRPLLGQ NIENVLRQER EDIQNSSKEL LGNSNECRMI 651 700 ENSP00000421985/1-1166 SP-SDCQEEN AVDVKQYRDK LRTCFDAKLE TVVCTGSVPV DKCALSESGL ENSBTAP00000000917/1-1133 SP--DCQEEN APDVKQYRDK SRTCLDTKLE TVVCTGSAPV DRCALSKSGL BACU013061/1-750 SPSSDCQEEN AVDVKQCRDK LRTCLDTKLE TVVCTGSAPV DRCALSKSSL bmy_08335T0/1-775 SPSSDCQEEN AVDVKQCRDK LRTCLDTKLE TVVCTGSAPV DRCALSKSSL ENSTTRP00000012826/1-1160 SPSSDCQEEN AVDVKQCRDK LRTCLDTKLE TVVCTGSAPV DRCALSKSSL 701 750 ENSP00000421985/1-1166 ESTEETWQSE KLLDSDSHTG KAMRSTGMVV EKKPPDKIVP ASFSCEAAQT ENSBTAP00000000917/1-1133 DPAEETWQNE ELLDSGSHTG KVLRSAGMVV EKKPPDKLVT AAFSCEATQT BACU013061/1-750 EPAEESWQSE ELLDSGNHTG KAFRSTGMVV EKKPPDKLVT AAFSCEATQT bmy_08335T0/1-775 EPAEESWQSE ELLDSGNHTG KVFRSTGMVV EKKPPDKLVT AAFSCEATQT ENSTTRP00000012826/1-1160 EPAEESWQSE ELLDSGNHTG KVFRSTGMVV EKKPPDKLVT AAFSCEATQT 751 800 ENSP00000421985/1-1166 KVTFLIGDSM SPDSDTELRS QAVVDQITRH HTKPLKEERG AIDQHQETKQ ENSBTAP00000000917/1-1133 KVTFLIGDSM SPDSDTELRS QAVVDQITRH HTKSPKEERG AVDQHQEAKQ BACU013061/1-750 KVTFLIGDSM SPDSDTELRS QAVVDQITRH HTKSPKEERG AVDQHQETAQ bmy_08335T0/1-775 KVTFLIGDSM SPDSDTELRS QAVVDQITRH HTKSPKEERG AVDQHQETAQ ENSTTRP00000012826/1-1160 KVTFLIGDSM SPDSDTELRS QAVVDQITRH HTKSPKEERG AVDQHQETAQ 801 850 ENSP00000421985/1-1166 TTKDQSGESD TQNMVSEEPC ELPCWNHSDP ESMSLFDEYF NDDSIETRTI ENSBTAP00000000917/1-1133 TTK--SEESA IPNIVSGEPC ELPCWNHSDL ESMSLFDEYF NDDSIETRTI BACU013061/1-750 TTK--SGEPD VPNMVSGEPC ELPCWNHSDP ESMSLFDEYF NDDSIETRTI bmy_08335T0/1-775 TTK--SGEPD IPNMVSGEPC ELPCWNHSDP ESMSLFDEYF NDDSIETRTI ENSTTRP00000012826/1-1160 TAK--SGEPD ILNMVSGEPC ELSCWNHSDP ESMSLFDEYF NDDSIETRTI 851 900 ENSP00000421985/1-1166 DDVPFKTSTD SKDHCCMLEF SKILCTKNNK QNNEFCKCIE TVPQDSCKTC ENSBTAP00000000917/1-1133 DDIPLKTSTD SKQHCCMLEF SKRLCTKNSK PNNEFCKCVA TVHQDSCKTC BACU013061/1-750 DDIPVKTSTD SKEHCCMLEF SKRFYAKNSK QNNEFCKCVG TVHQDSCKTC bmy_08335T0/1-775 DDIPVKTSTD SKEHCCMLEF SKRFYTKNSK QNNEFCKCVG TVHQDSCKTC ENSTTRP00000012826/1-1160 DDIPVKTSTD SKEHCCMLEF SKRFYTKNSK QSNEFCKCVG TVHQDSCKTC 901 950 ENSP00000421985/1-1166 FPQQDQRDTL SILVPHGDKE SSDKKIAVGT EWDIPRNESS DSALGDSESE ENSBTAP00000000917/1-1133 FPQQDQRDTL SILVPHGDKE SSEKKIAVGA EWDIPRNESS DSALGDSESE BACU013061/1-750 FPQQDQRDTL SILVPHGDKE SSEKKVAVGA EWDIPRNESS DSALGDSESE bmy_08335T0/1-775 FPQQDQRDTL SILVPHGDKE SSEKKVAVGA EWDIPRNESS DSALGDSESE ENSTTRP00000012826/1-1160 FPQQDQRGTL SILVPHGDKE SSEKKVAVGA EWDIPRNESS DSALGDSESE 951 1000 ENSP00000421985/1-1166 DTGHDMTRQV SSYYGGEQED WAEEDEIPFP GSKLIEVSAV QPNIANFGRS ENSBTAP00000000917/1-1133 DTGQDVARQG NSYYGGEQED WAEEDEIPFP GSKLIEVSAV QPNIANFGRS BACU013061/1-750 DTGHDVTRQV SSYYGGEQED WAEEDEIPFP GSKLIEVSAV QPNIANFGRS bmy_08335T0/1-775 DTGHDVTRQV SSYYGGEQED WAEEDEIPFP GSKLIEVSAV QPNIANFGRS ENSTTRP00000012826/1-1160 DTGHDVTRQV SSYYGGEQED WAEEDEIPFP GSKLIEVSAV QPNIANFGRS 1001 1050 ENSP00000421985/1-1166 LLGGYCSSYV PDFVLQGIGS DERFRQCLMS DLSHAVQHPV LDEPIAEAVC ENSBTAP00000000917/1-1133 LLGGYCSSYV PDFVLQGIGN DERLRQCLVS DLSHAVQHPV LDEPIAEAVC BACU013061/1-750 LLGGYCSSYV PDFVLQGIGN DERLRQCLVS DLSHAVQHPV LDEPIAEAVC bmy_08335T0/1-775 LLGGYCSSYV PDFVLQGIGN DERLRQCLVS DLSHAVQHPV LDEPIAEAVC ENSTTRP00000012826/1-1160 LLGGYCSSYV PDFVLQGIGN DERLRQCLVS DLSHAVQHPV LDEPIAEAVC 1051 1100 ENSP00000421985/1-1166 IIADMDKWTV QVASSQRRVT DNKLGKEVLV SSLVSNLLHS TLQLYKHNLS ENSBTAP00000000917/1-1133 IIADMDKWTV QVASSQRRMT DNKLGKEVLV SSLVSNLLHS TLQLYKHNLS BACU013061/1-750 IIADMDKWTV QVASSQRRMT DNKLGKEVLV SSLVSNLLHS TLQLYKHNLS bmy_08335T0/1-775 IIADMDKWTV QVASSQRRMT DNKLGKEVLV SSLVSNLLHS TLQLYKHNLS ENSTTRP00000012826/1-1160 IIADMDKWTV QVASSQRRMT DNKLGKEVLV SSLVSNLLHS TLQLYKHNLS 1101 1150 ENSP00000421985/1-1166 PNFCVMHLED RLQELYFKSK MLSEYLRGQM RVHVKELGVV LGIESSDLPL ENSBTAP00000000917/1-1133 PNFCVMHLED RLQELYFKSK MLSEYLRGQM RVHVKELGVV LGIESSDLPL BACU013061/1-750 PNFCVMHLED RLQELYFKSK MLSEYLRGQM RVHVKELGVV LGIKSSDLPL bmy_08335T0/1-775 PNFCVMHLED RLQELYFKSK MLSEYLRGQM RVHVKELGVV LGIESSDLPL ENSTTRP00000012826/1-1160 PNFCVMHLED RLQELYFKSK MLSEYLRGQM RVHVKELGVV LGIESSDLPL 1151 1200 ENSP00000421985/1-1166 LAAVASTHSP YVAQILL ENSBTAP00000000917/1-1133 LAAVASTHSP YVAQILL BACU013061/1-750 LAAVASTHSP YVAQILL bmy_08335T0/1-775 LAAVASTHSP YVAQILL ENSTTRP00000012826/1-1160 LAAVASTHSP YVAQILL