KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:45 2014 Check: 00 .. Name: BACU014816/1-268 Len: 288 Check: 4825 Weight: 1.00 Name: bmy_13503T0/1-243 Len: 288 Check: 3248 Weight: 1.00 Name: ENSP00000302441/1-248 Len: 288 Check: 491 Weight: 1.00 Name: ENSBTAP00000000918/1-248 Len: 288 Check: 287 Weight: 1.00 Name: ENSTTRP00000012142/1-248 Len: 288 Check: 9551 Weight: 1.00 // 1 50 BACU014816/1-268 MRKEVSTERH QEGSRASDHP LHVSDSDNPS HRDGDESQAL PRTTTPESRG bmy_13503T0/1-243 ---------- ----MVSHRV LFVGPLSL-- --DFID---- SREFSPQV-- ENSP00000302441/1-248 ---------- --MGLSRVRA VFF-DLDN-- --TLIDTAGA SRRGMLEV-- ENSBTAP00000000918/1-248 ---------- --MGLSRVRA VFF-DLDN-- --TLIDTAGA SRKGMLEV-- ENSTTRP00000012142/1-248 ---------- --MGLSRVRA VFF-DLDN-- --TLIDTAGA SRKGMLEV-- 51 100 BACU014816/1-268 TSLFRGAQVW GHLAGVPRRC ARVRRPRGSA PVFPVRRPVS RSRPRGCDLA bmy_13503T0/1-243 IKLLQSKYHY KEEAEI--IC NKVQVKLSKE CFHPSKSCIT DLRTSHWEEA ENSP00000302441/1-248 IKLLQSKYHY KEEAEI--IC DKVQVKLSKE CFHPYNTCIT DLRTSHWEEA ENSBTAP00000000918/1-248 IKLLQSKYHY KEEAEI--IC NKVQVKLSKE CFHPSNTCIT DLRTSHWEEA ENSTTRP00000012142/1-248 IKLLQSKYHY KEEAEI--IC NKVQVKLSKE CFHPSKSCIT DLRTSHWEEA 101 150 BACU014816/1-268 RRAGGGGMGL SRVRA-VFFD LDNTLID--T AGASRKGMLE VTFR----LP bmy_13503T0/1-243 IQETKGGAAN RKLAEECYFL WKSTRLQHMT LAEDVKAMLT ELRKEVRLLL ENSP00000302441/1-248 IQETKGGAAN RKLAEECYFL WKSTRLQHMT LAEDVKAMLT ELRKEVRLLL ENSBTAP00000000918/1-248 IQETKGGAAN RKLAEECYFL WKSTRLQHMT LAEEVKAMLT ELRKEVRLLL ENSTTRP00000012142/1-248 IQETKGGAAN RKLAEECYFL WKSTRLQHMT LAEDVKAMLT ELRKEVRLLL 151 200 BACU014816/1-268 LPSGEPGAPP RALSRPLGPP AHCPVGSLRA GAPGPGGPSC RPAAAAPLRE bmy_13503T0/1-243 LTNGEQQTQR EKIKA----- --CACQSYFD AIVVGGEQ-- KEEKPAPSIF ENSP00000302441/1-248 LTNGDRQTQR EKIEA----- --CACQSYFD AVVVGGEQ-- REEKPAPSIF ENSBTAP00000000918/1-248 LTNGERQTQR EKIEA----- --CACQSYFD AIVVGGEQ-- KEEKPAPSIF ENSTTRP00000012142/1-248 LTNGEQQTQR EKIKA----- --CACQSYFD AIVVGGEQ-- KEEKPAPSIF 201 250 BACU014816/1-268 RAGCDLRALP ALGL-PEGCR QTATRAESPP HRKAAARQAP GFLPGQVWTC bmy_13503T0/1-243 YYSCDL---- -LGVQPGDCV MVGDTLETDI QGGLNAG--- --LKATVWIN ENSP00000302441/1-248 YYCCNL---- -LGVQPGDCV MVGDTLETDI QGGLNAG--- --LKATVWIN ENSBTAP00000000918/1-248 YYSCDL---- -LGVQPGDCV MVGDTLETDI QGGLNAG--- --LKATVWIN ENSTTRP00000012142/1-248 YYSCDL---- -LGVQPGDCV MVGDTLETDI QGGLNAG--- --LKATVWIN 251 300 BACU014816/1-268 RDERAP---- GSPGLTAGGW --SPTACSSL DL------ bmy_13503T0/1-243 KNGMVPLKSA PRPHYIVSSV LELPAVLQSI DCKVSVSA ENSP00000302441/1-248 KNGIVPLKSS PVPHYMVSSV LELPALLQSI DCKVSMST ENSBTAP00000000918/1-248 KNGVVPLKSS PTPHYIVSSV LELPALLHSI DCKVSVST ENSTTRP00000012142/1-248 KNGMVPLKSS PRPHYIVSSV LELPALLQSI DCKVSVSA