KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:46 2014 Check: 00 .. Name: ENSBTAP00000000927/1-452 Len: 548 Check: 4550 Weight: 1.00 Name: ENSTTRP00000004605/1-450 Len: 548 Check: 7031 Weight: 1.00 Name: ENSP00000379975/1-452 Len: 548 Check: 4667 Weight: 1.00 Name: bmy_13096T0/1-548 Len: 548 Check: 8911 Weight: 1.00 Name: BACU018953/1-452 Len: 548 Check: 3695 Weight: 1.00 // 1 50 ENSBTAP00000000927/1-452 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004605/1-450 ---------- ---------- ---------- ---------- ---------- ENSP00000379975/1-452 ---------- ---------- ---------- ---------- ---------- bmy_13096T0/1-548 SQGGPGAGPG GGRGRTGVPR RRLLQPESRD KAWGSPPFPG SFYSPHAFPI BACU018953/1-452 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000000927/1-452 ---------M DDIFTQCREG NAVAVRLWLD NTENDLNQGD DHGFSPLHWA ENSTTRP00000004605/1-450 ---------M DDIFTQCREG NAVAVRLWLD NTENDLNQGD DHGFSPLHWA ENSP00000379975/1-452 ---------M DDIFTQCREG NAVAVRLWLD NTENDLNQGD DHGFSPLHWA bmy_13096T0/1-548 EGTERRDAAM DDIFTQCREG NAVAVRLWLD NTENDLNQGD DHGFSPLHWA BACU018953/1-452 ---------M DDIFTQCREG NAVAVRLWLD NTENDLNQGD DHGFSPLHWA 101 150 ENSBTAP00000000927/1-452 CREGRSAVVE MLIMRGARIN VMNRGDDTPL HLAASHGHRD IVQKLLQYKA ENSTTRP00000004605/1-450 CREGRSAVVE MLIMRGARIN VMNRGDDTPL HLAASHGHRD IVQKLLQYKA ENSP00000379975/1-452 CREGRSAVVE MLIMRGARIN VMNRGDDTPL HLAASHGHRD IVQKLLQYKA bmy_13096T0/1-548 CREGRSAVVE MLIMRGARIN VMNRGDDTPL HLAASHGHRD IVQKLLQYKA BACU018953/1-452 CREGRSAVVE MLIMRGARIN VMNRGDDTPL HLAASHGHRD IVQKLLQYKA 151 200 ENSBTAP00000000927/1-452 DINAVNEHGN VPLHYACFWG QDQVAEDLVA NGALVSICNK YGEMPVDKAK ENSTTRP00000004605/1-450 DINAVNEHGN VPLHYACFWG QDQVAEDLVA NGALVSICNK YGEMPVDKAQ ENSP00000379975/1-452 DINAVNEHGN VPLHYACFWG QDQVAEDLVA NGALVSICNK YGEMPVDKAK bmy_13096T0/1-548 DINAVNEHGN VPLHYACFWG QDQVAEDLVA NGALVSICNK YGEMPVDKAK BACU018953/1-452 DINAVNEHGN VPLHYACFWG QDQVAEDLVA NGALVSICNK YGEMPVDKAK 201 250 ENSBTAP00000000927/1-452 PPLRELLRER AEKMGQNLNR IPYKDTFWKG TTRTRPR--- ---------- ENSTTRP00000004605/1-450 TPLRELLRER AEKMGQNLNR I-YKDTFW-G TTRTRPR--- ---------- ENSP00000379975/1-452 APLRELLRER AEKMGQNLNR IPYKDTFWKG TTRTRPR--- ---------- bmy_13096T0/1-548 APLRELLRER AEKMGQNLNR IPYKDTFWKG TTRTRPRESV VRGGVVIENN BACU018953/1-452 APLRELLRER AEKMGQNLNR IPYKDTFWKG TTRTRPR--- ---------- 251 300 ENSBTAP00000000927/1-452 ---------- ---------- ----NGTLNK HSGIDFKQLN FLVMENENHS ENSTTRP00000004605/1-450 ---------- ---------- ----NGTLNK HSGIDFKQLN FLAKLNENHS ENSP00000379975/1-452 ---------- ---------- ----NGTLNK HSGIDFKQLN FLTKLNENHS bmy_13096T0/1-548 PGLLGLGERE AGKREVPDLP VLSGNGTLNK HSGIDFKQLN FLAKLNENHS BACU018953/1-452 ---------- ---------- ----NGTLNK HSGIDFKQLN FLAKLNENHS 301 350 ENSBTAP00000000927/1-452 GELWKGRWQG NDIVVKMLKV RDWSTRKSRD FNEECPRLRI FSHPNVLPVL ENSTTRP00000004605/1-450 GELWKGRWQG NDIVVKMLKV RDWSTRKSRD FNEECPRLRI FSHPNVLPVL ENSP00000379975/1-452 GELWKGRWQG NDIVVKVLKV RDWSTRKSRD FNEECPRLRI FSHPNVLPVL bmy_13096T0/1-548 GELWKGRWQG NDIVVKMLKV RDWSTRKSRD FNEECPRLRI FSHPNVLPVL BACU018953/1-452 GELWKGRWQG NDIVVKMLKV RDWSTRKSRD FNEECPRLRI FSHPNVLPVL 351 400 ENSBTAP00000000927/1-452 GACQSPPAPH PTLITHWMPY GSLYNVLHEG TNFVVDQSQA VKFALDMARG ENSTTRP00000004605/1-450 GACQSPPAPH PTLITHWMPY GSLYNVLHEG TNFVVDQSQA VKFALDMARG ENSP00000379975/1-452 GACQSPPAPH PTLITHWMPY GSLYNVLHEG TNFVVDQSQA VKFALDMARG bmy_13096T0/1-548 GACQSPPAPH PTLITHWMPY GSLYNVLHEG TNFVVDQSQA VKFALDMARG BACU018953/1-452 GACQSPPAPH PTLITHWMPY GSLYNVLHEG TNFVVDQSQA VKFALDMARG 401 450 ENSBTAP00000000927/1-452 MAFLHTLEPL IPRHALNSRS VMIDEDMTAR ISMADVKFSF QCPGRMYAPA ENSTTRP00000004605/1-450 MAFLHTLEPL IPRHALNSRS VMIDEDMTAR ISMADVKFSF QCPGRMYAPA ENSP00000379975/1-452 MAFLHTLEPL IPRHALNSRS VMIDEDMTAR ISMADVKFSF QCPGRMYAPA bmy_13096T0/1-548 MAFLHTLEPL IPRHALNSRS VMIDEDMTAR ISMADVKFSF QCPGRMYAPA BACU018953/1-452 MAFLHTLEPL IPRHALNSRS VMIDEDMTAR ISMADVKFSF QCPGRMYAPA 451 500 ENSBTAP00000000927/1-452 WVAPEALQKK PEDTNRRSAD MWSFAVLLWE LVTREVPFAD LSNMEIGMKV ENSTTRP00000004605/1-450 WVAPEALQKK PEDTNRRSAD MWSFAVLLWE LVTREVPFAD LSNMEIGMKV ENSP00000379975/1-452 WVAPEALQKK PEDTNRRSAD MWSFAVLLWE LVTREVPFAD LSNMEIGMKV bmy_13096T0/1-548 WVAPEALQKK PEDTNRRSAD MWSFAVLLWE LVTREVPFAD LSNMEIGMKV BACU018953/1-452 WVAPEALQKK PEDTNRRSAD MWSFAVLLWE LVTREVPFAD LSNMEIGMKV 501 550 ENSBTAP00000000927/1-452 ALEGLRPTIP PGISPHVCKL MKICMNEDPA KRPKFDMIVP ILEKMQDK ENSTTRP00000004605/1-450 ALEGLRPTIP PGISPHVCKL MKICMNEDPA KRPKFDMIVP ILEKMQDK ENSP00000379975/1-452 ALEGLRPTIP PGISPHVCKL MKICMNEDPA KRPKFDMIVP ILEKMQDK bmy_13096T0/1-548 ALEGLRPTIP PGISPHVCKL MKICMNEDPA KRPKFDMIVP ILEKMQDK BACU018953/1-452 ALEGLRPTIP PGISPHVCKL MKICMNEDPA KRPKFDMIVP ILEKMQDK