KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:48 2014 Check: 00 .. Name: ENSP00000284984/1-967 Len: 985 Check: 467 Weight: 1.00 Name: ENSBTAP00000000944/1-970 Len: 985 Check: 5769 Weight: 1.00 Name: ENSTTRP00000007579/1-956 Len: 985 Check: 7251 Weight: 1.00 Name: bmy_10481T0/1-901 Len: 985 Check: 9292 Weight: 1.00 Name: BACU000105/1-945 Len: 985 Check: 2612 Weight: 1.00 // 1 50 ENSP00000284984/1-967 MQRAVPEGFG RRKLGSDMGN AERAPGSRSF GPVPTLL-LL ---AAALLAV ENSBTAP00000000944/1-970 MQRAVPAGFR KRTAGGDMGH --KAPRARGL QPVPSPL-LL LAAAAALLVV ENSTTRP00000007579/1-956 VPRAVPAEFG RRTAGGDMGN --TARRSRGS QPAPVLLRLL LAAASALLVV bmy_10481T0/1-901 ---------- -------MGN --TARRSRGS QPAPVLLRLL LAAASALLVV BACU000105/1-945 ---------- -------MGN --TARRSRGS QPAPVLLRLL LAAASALLVV 51 100 ENSP00000284984/1-967 SDALGRPSEE DEELVVPELE RAPGHGTTRL RLHAFDQQLD LELRPDSSFL ENSBTAP00000000944/1-970 PGAHGRPAEE DEELVLPALE RDPGLRTAHL RLDAFGRQLS LELHLDRGFL ENSTTRP00000007579/1-956 PGVRGRPTEE DEELVLLAPE SDPGHRTTHF RLDAFGRQLL LELQPDRGFL bmy_10481T0/1-901 PGVRGRPTEE DEELVLLAPE RDPGHRTTHL RLDAFGRQLL LELQPDRGFL BACU000105/1-945 PGVRGRPTEE DEELVLLAPE RDPGHRTTHL RLDAFGGQLL LELQPDRGFL 101 150 ENSP00000284984/1-967 APGFTLQNVG RKSGSETPLP ET--DLAHCF YSGTVNGDPS SAAALSLCEG ENSBTAP00000000944/1-970 APGFTLQTVG RRPEPDVQRS DPVGDLAHCF YSGTVNGDPS SAAALSLCDG ENSTTRP00000007579/1-956 APGFTLQTVG RRPGPDASRS DPVGDLAHCF YSGTVNGDPS SAAALSLCEG bmy_10481T0/1-901 APGFTLQTVG RRPGPDASRP DPVGDLAHCF YSGTVNGDPS SAAALSLCEG BACU000105/1-945 APGFTLQTVG RRPGPDASRS DPVGDLAHCF YSGTVNGDPS SAAALSLCEG 151 200 ENSP00000284984/1-967 VRGAFYLLGE AYFIQPLPAA -------SER LATAAPGEKP PAPLQFHLLR ENSBTAP00000000944/1-970 VRGAFYLQGE EYFIQPAPAA ATLSLAPAAA AAAAAAGEQQ QARPQFHLLR ENSTTRP00000007579/1-956 VRGAFYLQGE EYFIQPAPAA ---------- ----AAEEEP PTRPQFHLLR bmy_10481T0/1-901 VRGAFYLQGE EYFIQPAPAA ---------- ----AAGEEP PARPQFHLLR BACU000105/1-945 VRGAFYLQGE EYFIQPAPAA ---------- ----AAGEEP PPRPQFHLLR 201 250 ENSP00000284984/1-967 RNRQGDVGGT CGVVDDEPRP TGKAETEDED EGTEGEDEGA QWSPQDPALQ ENSBTAP00000000944/1-970 RRRRGDGGAK CGVLDDETQL AGGA------ -GPEGEDATV QWAPRDPAPQ ENSTTRP00000007579/1-956 RRRRGGGGAR CGVLDDETQL AGGA------ -GSEDEHATA QGPPRDRATQ bmy_10481T0/1-901 RRRRGGGGAR CGVLDDETQL AGGA------ -GSEGEHATA QGPLRDRATQ BACU000105/1-945 RRRRGGGGAR CGVLDDETQL AGGA------ -GSEGEHATA QGPLRDRATQ 251 300 ENSP00000284984/1-967 GVGQPTGTGS IRKKRFVSSH RYVETMLVAD QSMAEFHGSG LKHYLLTLFS ENSBTAP00000000944/1-970 RPGHRTGTGS LRKKRFVSSP RYVETMLVAD QSMAEFHGSD LKHYLLTLFS ENSTTRP00000007579/1-956 RMGQPTXXXX XXXXXXXXXX XXXXXXXXXX XXMAEFHGSG LKHYLLPCL- bmy_10481T0/1-901 RTGQPTGTRS LRKKRFVSSP RYVETMLVAD QSMAEFHGSG LKHYLLTLFS BACU000105/1-945 RTGQPTGTRS LRKKRFVSSP RYVETMLVAD QSMAEFHGSG LKHYLLTLFS 301 350 ENSP00000284984/1-967 VAARLYKHPS IRNSVSLVVV KILVIHDEQK GPEVTSNAAL TLRNFCNWQK ENSBTAP00000000944/1-970 VAARLYKHPS IRNSVSLVVV KILVIYEEKK GPEVTSNAAL TLRNFCSWQK ENSTTRP00000007579/1-956 VTARLYKHPS IRNSVSLVVV KILVIYEEQK GPEVTSNAAL TLRNFCNWQK bmy_10481T0/1-901 VAARLYKHPS IRNSVSLVVV KILVIYEEQK GPEVTSNAAL TLRNFCNWQK BACU000105/1-945 VAARLYKHPS IRNSVSLVVV KILVIYEEQK GPEVTSNAAL TLRNFCNWQK 351 400 ENSP00000284984/1-967 QHNPPSDRDA EHYDTAILFT RQDLCGSQTC DTLGMADVGT VCDPSRSCSV ENSBTAP00000000944/1-970 QHNPPSDRDA EHYDTAILFT RQDLCGTQTC DTLGMADVGT ICDPSRSCSV ENSTTRP00000007579/1-956 QHNPPSDRDA EHYDTAILFT RQDLCGAQTC DTLGMADVGT VCDPSRSCSV bmy_10481T0/1-901 QHNPPSDRDA EHYDTAILFT RQDLCGAQTC DTLGMADVGT VCDPSRSCSV BACU000105/1-945 QHNPPSDRDA EHYDTAILFT RQDLCGAQTC DTLGMADVGT VCDPSRSCSV 401 450 ENSP00000284984/1-967 IEDDGLQAAF TTAHELGHVF NMPHDDAKQC ASLNGVNQDS HMMASMLSNL ENSBTAP00000000944/1-970 IEDDGLQAAF TTAHELGHVF NMPHDDAKQC AGINGLNRDS HMMASMLTNL ENSTTRP00000007579/1-956 IEDDGLQAAF TTAHELGHVF NMPHDDAKQC ASVNGVNRDS HMMASMLSNL bmy_10481T0/1-901 IEDDGLQAAF TTAHELGK-- ---------- ---------- -------SVL BACU000105/1-945 IEDDGLQAAF TTAHELGHVF NMPHDDAKQC ANINGVNRDS HMMASMLSNL 451 500 ENSP00000284984/1-967 DHSQPWSPCS AYMITSFLDN GHGECLMDKP QNPIQLPGDL PGTSYDANRQ ENSBTAP00000000944/1-970 DHNQPWSPCS ASSITTFLDN GHGECLMDEP QLVIQLPSDL PGTLYDASRQ ENSTTRP00000007579/1-956 DRSQPWSPCS AYMITSFLDN GHGECLMDKP QSPIQLPSDL PGTLYDANRQ bmy_10481T0/1-901 DFQ----IAL LYIIA----- -FGECLMDKP QSPIQLPSDL PGTLYDANRQ BACU000105/1-945 DRSQPWSPCS AYMITSFLDN GHGECLMDKP QSPIQLPSDL PGTLYDANRQ 501 550 ENSP00000284984/1-967 CQFTFGEDSK HCPDAASTCS TLW-----CT GTSGGVLVCQ TKHFPWADGT ENSBTAP00000000944/1-970 CQLTFGEESR HCPDAASTCM ILW-----CT GTSGGLPVCQ TKHFPWADGT ENSTTRP00000007579/1-956 CQFTFGDESK HCPDAASTCT TLW-----CT GTSGGLLVCQ TKHFPWADGT bmy_10481T0/1-901 CQFTFGDESK HCPDAASTCT TLW-----CT GTSGGLLVCQ TKHFPWADGT BACU000105/1-945 CQFTFGEESK HCPDAASTCT TXXXXTLGCT GTSGGLLVCQ TKHFPWADGS 551 600 ENSP00000284984/1-967 SCGEGKWCIN GKCVNKTDRK HFDTPFHGSW GMWGPWGDCS RTCGGGVQYT ENSBTAP00000000944/1-970 SCGEGKWCVN GQCLDQTDKE HFDTPVHGSW GPWGPWGDCS RTCGGGVQYT ENSTTRP00000007579/1-956 SCGEGKWCVN GKCVNKTDKK HFDTPVHGSW GPWGPWGDCS RTCGGGVQYT bmy_10481T0/1-901 SCGEGKWCVN GKCVNKTDKK HFDTPVHGSW GPWGPWGDCS RTCGGGVQYT BACU000105/1-945 SCGEGKWCVN GKCVNKTDKK HFDTPVHGSW GPWGPWGDCS RTCGGGVQYT 601 650 ENSP00000284984/1-967 MRECDNPVPK NGGKYCEGKR VRYRSCNLED CPDNNGKTFR EEQCEAHNEF ENSBTAP00000000944/1-970 MRECDNPVPK NGGKYCEGKR VRYRSCNIED CPENNGKTFR MEQCEAHNEF ENSTTRP00000007579/1-956 MRECDNPVPK NGGKYCEGKR VRYRSCNIED CPENNGKTFR EEQCEAHNEF bmy_10481T0/1-901 MRECDNPVPK NGGKYCEGKR VRYRSCNIED CPENNGKTFR EEQCEAHNEF BACU000105/1-945 MRECDNPVPK NGGKYCEGKR VRYRSCNIED CPENNGKTFR EEQCEAHNEF 651 700 ENSP00000284984/1-967 SKASFGSGPA VEWIPKYAGV SPKDRCKLIC QAKGIGYFFV LQPKVVDGTP ENSBTAP00000000944/1-970 SKASFGSGPA VEWIPKYAGV SPKDRCKLIC QAKGTGYFFV LQPKVVDGTP ENSTTRP00000007579/1-956 SKASFGSGPA VEWTPKYAGV SPKDRCKLIC QAKGIGYFFV LQPKVVDGTP bmy_10481T0/1-901 SKASFGSGPA VEWTPKYAGV SPKDRCKLIC QAKGIGYFFV LQPKVVDGTP BACU000105/1-945 SKASFGSGPA VEWTPKYAGV SPKDRCKLIC QAKGIGYFFV LQPKVVDGTP 701 750 ENSP00000284984/1-967 CSPDSTSVCV QGQCVKAGCD RIIDSKKKFD KCGVCGGNGS TCKKISGSVT ENSBTAP00000000944/1-970 CSPDSTSVCV QGQCVKAGCD HIIDSKNKFD KCGICGGNGS TCKKVSGSVT ENSTTRP00000007579/1-956 CSPDSTSVCV QGQCVKAGCD RIIDSKKKFD KCGICGGNGS TCKKISGSVT bmy_10481T0/1-901 CSPDSTSVCV QGQCVKAGCD RIIDSKKKFD KCGICGGNGS TCKKISGSVT BACU000105/1-945 CSPDSTSVCV QGQCVKAGCD RIIDSKKKFD KCGICGGNGS TCKKISGSVT 751 800 ENSP00000284984/1-967 SAKPGYHDII TIPTGATNIE VKQRNQRGSR NNGSFLAIKA ADGTYILNGD ENSBTAP00000000944/1-970 TAKPGYHDIV TIPTGATNIE VKQRNHRGSR NNGSFLAIKA ADGTYILNGD ENSTTRP00000007579/1-956 SAKPGYHDIV TIPTGATNIE VKQRNQRGSR NNGSYLAIKA ADGTYILNGD bmy_10481T0/1-901 SAKPGYHDIV TIPTGATNIE VKQRNQRGSR NNGSYLAIKA ADGTYILNGD BACU000105/1-945 SAKPGYHDIV TIPTGATNIE VKQRNQRGSR NNGSYLAIKA ADGTYILNGD 801 850 ENSP00000284984/1-967 YTLSTLEQDI MYKGVVLRYS GSSAALERIR SFSPLKEPLT IQVLTVGNAL ENSBTAP00000000944/1-970 FTLSTLEQDI THKGSVLRYS GSSAALERIR SFSPLKEPLT IQVLTVGNAF ENSTTRP00000007579/1-956 FTLSTLEQDI TYKGSVLRYS GSSAALERIR SFSPLKEPLT IQVLTVGNAL bmy_10481T0/1-901 FTLSTLEQDI TYKGSVLRYS GSSAALERIR SFSPLKEPLT IQVLTVGNAL BACU000105/1-945 FTLSTLEQDI TYKGSVLRYS GSSAALERIR SFSPLKEPLT IQVLTVGNAL 851 900 ENSP00000284984/1-967 RPKIKYTYFV KKKKESFNAI PTFSAWVIEE WGECSKSCEL GWQRRLVECR ENSBTAP00000000944/1-970 RPKIKYTYFV KKKKESFNAI PTFSEWVIEE WGECSKSCGL GVQRRLVECR ENSTTRP00000007579/1-956 RPKIKYTYFV KKKKESFNAI PTFSEWVIEE WGECSKSCGQ GVQRRLVECR bmy_10481T0/1-901 RPKIKYTYFV KKKKESFNAI PTFSEWVIEE WGECSKSCGQ GVQRRLVECR BACU000105/1-945 RPKIKYTYFV KKKKESFNAI PTFSEWVIEE WSECSKSCGQ GVQRRLVECR 901 950 ENSP00000284984/1-967 DINGQPASEC AKEVKPASTR PCADHPCPQW QLGEWSSCSK TCGKGYKKRS ENSBTAP00000000944/1-970 DINGQPASEC AKEVKPASTR PCADLPCPRW QLGDWSPCSK TCGKGYKKRT ENSTTRP00000007579/1-956 DLNGQPASEC AKEVKPASTR PCADLPCPLW QLGDWSPCSK TCGKGYKKRT bmy_10481T0/1-901 DINGQPASEC AKEVKPASTR PCADLPCPLW QLGDWSPCSK TCGKGYKKRT BACU000105/1-945 DINGQPASEC AKEVKPASTR PCADLPCPLW QLGDWSPCSK TCGKGYKKRT 951 1000 ENSP00000284984/1-967 LKCLSHDGGV LSHESCDPLK KPKHFIDFCT MAECS ENSBTAP00000000944/1-970 LQCLSHDGGV LSHESCDPLK KPKHYIDFCT VAECS ENSTTRP00000007579/1-956 LQCLSHDGGV LSHESCDPLK KPKHYIDFCT MAECS bmy_10481T0/1-901 LQCLSHDGGV LSHESCDPLK KPKHYIDFCT MAECS BACU000105/1-945 LQCLSHDGGV LSHESCDPLK KPKHYIDFCT MAECS