KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:49 2014 Check: 00 .. Name: ENSTTRP00000000107/1-259 Len: 367 Check: 1953 Weight: 1.00 Name: ENSP00000250160/1-367 Len: 367 Check: 7922 Weight: 1.00 Name: ENSBTAP00000000946/1-360 Len: 367 Check: 593 Weight: 1.00 Name: bmy_09847T0/1-198 Len: 367 Check: 7714 Weight: 1.00 Name: BACU013259/1-326 Len: 367 Check: 39 Weight: 1.00 // 1 50 ENSTTRP00000000107/1-259 ---------- ---------- -RYAVGVCAX XXXXXXXXXX XXXXXXXXXX ENSP00000250160/1-367 MRWFLPWTLA AVTAAAASTV LATALSPAPT TMDFTPAPLE DTSSRPQFCK ENSBTAP00000000946/1-360 VGWPNPGLLY IFSP------ -PQALPPAPT AMGPTPAPLE DTSSRPQFCK bmy_09847T0/1-198 ---------M SALP------ -LQALSPAPT ATGFTPAPLE DTSAHPQFCK BACU013259/1-326 ---------M SALP------ -LQALSAAPA ATVFTPAPLE DTSAHPQFCK 51 100 ENSTTRP00000000107/1-259 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000250160/1-367 WPCECPPSPP RCPLGVSLIT DGCECCKMCA QQLGDNCTEA AICDPHRGLY ENSBTAP00000000946/1-360 WPCECPAAPP RCPLGVSLIT DGCECCKMCA QQLGDNCTEA AVCDPHRGLY bmy_09847T0/1-198 WPCECPPSPP RCPLGVSLIT DGCECCKMCA QQLGDNCTEA AVCDPHRGLY BACU013259/1-326 WPCECPPSPP RCPLGVSLVT DGCECCKMCA QQLGDNCTEA AVCDPHRGLY 101 150 ENSTTRP00000000107/1-259 XXXXXXXXXX XXXXXXX--- ---------- ---------- ---------- ENSP00000250160/1-367 CDYSGDRPRY AIGVCAQVVG VGCVLDGVRY NNGQSFQPNC KYNCTCIDGA ENSBTAP00000000946/1-360 CDYSGDHPRY AVGVCAQVVG VGCVLDGVRY NNGQSFQPNC KYNCTCVGGA bmy_09847T0/1-198 CDYSGDSPRY AVGVCAR--- ---------- ---------- ---------- BACU013259/1-326 CDYSGDSPRY AVGVCAQVVG VGCVLDGVRY NNGQSFQPNC KYNCTCVGGA 151 200 ENSTTRP00000000107/1-259 ---------- ---------- ---------- ---------- ---------- ENSP00000250160/1-367 VGCTPLCLRV RPPRLWCPHP RRVSIPGHCC EQWVCEDDAK RPRKTAPRDT ENSBTAP00000000946/1-360 VGCTPLCLRA RPPRLWCRRP QRVSLPGRCC EQWVCEDDAR RPRKTAPRHT bmy_09847T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU013259/1-326 VGCTPLCLRX NWGLTETGNS QGIWFPSAA- ---------- ---------- 201 250 ENSTTRP00000000107/1-259 ----AMEEVE PWHRNCIAYS SPWSPCSASC GLGVSTRISN INARCWPEQE ENSP00000250160/1-367 GAFDAVGEVE AWHRNCIAYT SPWSPCSTSC GLGVSTRISN VNAQCWPEQE ENSBTAP00000000946/1-360 GTSGNMDEIE PWHKNCIAYT SPWSPCSTSC GLGVSTRISN VNTRCWPEQE bmy_09847T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU013259/1-326 ----VMDEIE PWHRNCIAYT SPWSPCSTSC GLGVSTRISN VNAQCWPEQE 251 300 ENSTTRP00000000107/1-259 SRLCNLRPCD VDLWPHVKEG KKCLAVYQPE APVNFTLAGC TSTRSYRPKY ENSP00000250160/1-367 SRLCNLRPCD VDIHTLIKAG KKCLAVYQPE ASMNFTLAGC ISTRSYQPKY ENSBTAP00000000946/1-360 SRLCNLRPCD VDLRPHIKEG KKCLAVYQPE APVNFTLAGC TSTRTYRPKY bmy_09847T0/1-198 ---------- ---------- KKCLAVYQPE VPVNFTLAGC TSTRSYRPKY BACU013259/1-326 SRLCNLRPCD VDLWPHIKEG KKCLAVYQPE APMNFTLAGC TSTRSYRPKY 301 350 ENSTTRP00000000107/1-259 CGVCTDNRCC IPYKSKTIDI SFQCPDGPGF SRQALWINAC FCNLSCRNPN ENSP00000250160/1-367 CGVCMDNRCC IPYKSKTIDV SFQCPDGLGF SRQVLWINAC FCNLSCRNPN ENSBTAP00000000946/1-360 CGVCTDSRCC IPYKSKTISI SFQCPDGPGF SRQALWINAC FCNLSCRNPN bmy_09847T0/1-198 CGVCTDNRCC IPYKSKTIDI SFQCPDGPGF SRQALWINAC FCNLSCRNPN BACU013259/1-326 CGVCTDNRCC IPYKSKTIDV SFQCPDGPGF SRQALWINAC FCNLSCQNPN 351 400 ENSTTRP00000000107/1-259 DIFADLDSYP DFSEIAN ENSP00000250160/1-367 DIFADLESYP DFSEIAN ENSBTAP00000000946/1-360 DIFADLDSYP DFSEIAN bmy_09847T0/1-198 DIFADLDSYP DFSEIAN BACU013259/1-326 DIFADLDSYP DFSEIAN