KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:49 2014 Check: 00 .. Name: ENSTTRP00000000109/1-374 Len: 416 Check: 7004 Weight: 1.00 Name: bmy_09848T0/1-273 Len: 416 Check: 5488 Weight: 1.00 Name: ENSP00000404854/1-394 Len: 416 Check: 8202 Weight: 1.00 Name: BACU013260/1-384 Len: 416 Check: 5106 Weight: 1.00 Name: ENSBTAP00000000950/1-384 Len: 416 Check: 700 Weight: 1.00 // 1 50 ENSTTRP00000000109/1-374 ---------- ---------- --MSRELQDV DLAEVKPLVE KGETITGLLQ bmy_09848T0/1-273 ---------- ---------- ---------- ---------- ---------- ENSP00000404854/1-394 ---------- ---------- --MSREMQDV DLAEVKPLVE KGETITGLLQ BACU013260/1-384 MGDVTDEQDM TKHASRAGDS RVMSRELQDV DLAEVKPLVE KGE------- ENSBTAP00000000950/1-384 ---------- ---------- --MSRELQDV DLAEVKPLVE KGETITGLLQ 51 100 ENSTTRP00000000109/1-374 EFDVQEQDIE TLHGSIHVTL CGTPKGNRPV ILTYHDIGMN HKTCYNPLFN bmy_09848T0/1-273 -----EQDIE TLHGSIHVTL CGTPKGNRPV ILTYHDIGMN HKTCYNPLFN ENSP00000404854/1-394 EFDVQEQDIE TLHGSVHVTL CGTPKGNRPV ILTYHDIGMN HKTCYNPLFN BACU013260/1-384 -----EQDIE TLHGSIHVTL CGTPKGNRPV ILTYHDIGMN HKTCYNPLFN ENSBTAP00000000950/1-384 EFDVQEQDIE TLHGSIHVTL CGTPKGNRPV ILTYHDIGMN HKTCYNPLFN 101 150 ENSTTRP00000000109/1-374 SEDMQEITQH FAVCHVDAPG QQDSAASFPT GYVYPSMDQL AEMLPGVLHQ bmy_09848T0/1-273 FEDMQEITQH FAVCHVDAPG QQDSAASFPT GYVYPSMDQL AEMLPGVLHQ ENSP00000404854/1-394 YEDMQEITQH FAVCHVDAPG QQDGAASFPA GYMYPSMDQL AEMLPGVLQQ BACU013260/1-384 SEDMQEITQH FAVCHVDAPG QQDSAASFPT GYMYPSMDQL AEMLPGVLHQ ENSBTAP00000000950/1-384 SEDMQEITQH FAVCHVDAPG QQDGAASFPT GYMYPSMDQL AEMLPGVLQQ 151 200 ENSTTRP00000000109/1-374 FGLKSIIGMG TGAGAYILTR FALNNPEMVE GLVLINVNPC AEGWMDWAAS bmy_09848T0/1-273 FGLKSIIGMG TGAGAYVLTR FALNNPEMVE GLVLINVNPC AEGWMDWAAS ENSP00000404854/1-394 FGLKSIIGMG TGAGAYILTR FALNNPEMVE GLVLINVNPC AEGWMDWAAS BACU013260/1-384 FGLKSIIGMG TGAGAYILTR FALNNPEMVE GLVLINVNPC AEGWMDWAAS ENSBTAP00000000950/1-384 FGLKSIIGMG TGAGAYILTR FALNNPEMVE GLVLINVNPC AEGWMDWAAS 201 250 ENSTTRP00000000109/1-374 KISGWTQALP DMVMSHLFGK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09848T0/1-273 KISGWTQALP DMVMSHLFGK EEMQNNVEVV HTCRQHIVND MNPGNLHLFI ENSP00000404854/1-394 KISGWTQALP DMVVSHLFGK EEMQSNVEVV HTYRQHIVND MNPGNLHLFI BACU013260/1-384 KISGWTQALP DMVMSHLFGK EEMQNNVEVV HTCRQHIVND MNPGNLHLFI ENSBTAP00000000950/1-384 KISGWTQALP DMVVSHLFGK EEMQNNVEVV HAYRHHVMND MNPGNLQLFI 251 300 ENSTTRP00000000109/1-374 XXXXXXXXXX XXXXXXXXXX XXXXCPALLV VGDSSPAVDA VXXXXXXXXX bmy_09848T0/1-273 NVYN------ ---------- ---RCPALLV VGDSSPAVDA VIG------- ENSP00000404854/1-394 NAYNSRRDLE IERPMPGTHT VTLQCPALLV VGDSSPAVDA VVECNSKLDP BACU013260/1-384 NVYNSRRDLE IERPMPGTHT VTLQCPALLV VGDSSPAVDA VVECNSKLDP ENSBTAP00000000950/1-384 NAYNSRRDLE IERPMPGAHT VTLQCPALLV VGDSSPAVDA VVECNSKLDP 301 350 ENSTTRP00000000109/1-374 XXXXXXXMED CGGLPQISQP AKLAEAFKYF VQGMGYMPSA SMTRLMRSRT bmy_09848T0/1-273 ---------- ---------- ---------F VE--GSLSGE GGAGRTKGKE ENSP00000404854/1-394 TKTTLLKMAD CGGLPQISQP AKLAEAFKYF VQGMGYMPSA SMTRLMRSRT BACU013260/1-384 TKTTLLKMAD CGGLPQISQP AKLAEAFKYF VQGMGYMPSA SMTRLMRSRT ENSBTAP00000000950/1-384 TKTTLLKMAD CGGLPQISQP AKLAEAFKYF VQGMGYMPSA SMTRLMRSRT 351 400 ENSTTRP00000000109/1-374 ASGSSVTSLE GA-------- --RSRSHTSE GAR------- ---LDIVPNS bmy_09848T0/1-273 ASQCPVSTSE ---------- --RPRGHS-- ---------- ---LTLPQRH ENSP00000404854/1-394 ASGSSVTSLD GTRSRSHTSE GTRSRSHTSE GTRSRSHTSE GAHLDITPNS BACU013260/1-384 ASGSSVTSLE GA-------- --RSRSHTSE GAR------- ---LDIVPNS ENSBTAP00000000950/1-384 ASGSSVTSLE GARSRSHTSE GTRSRSHTSE GTR------- ---LDIIPNS 401 450 ENSTTRP00000000109/1-374 GGPGSSAGPN STEVSC bmy_09848T0/1-273 QTAKNKKHRA NT---- ENSP00000404854/1-394 GAAGNSAGPK SMEVSC BACU013260/1-384 GGTGSSAGPN STEVSC ENSBTAP00000000950/1-384 GGPGSSAGPN STEVSC