KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:50 2014 Check: 00 .. Name: bmy_16109T0/1-424 Len: 936 Check: 3730 Weight: 1.00 Name: BACU012077/1-919 Len: 936 Check: 7497 Weight: 1.00 Name: ENSP00000300176/1-481 Len: 936 Check: 6835 Weight: 1.00 Name: ENSTTRP00000008426/1-483 Len: 936 Check: 97 Weight: 1.00 Name: ENSBTAP00000000957/1-473 Len: 936 Check: 83 Weight: 1.00 // 1 50 bmy_16109T0/1-424 MVMAAKKGPG PGGGVGGGKA EAEAASEVWC RRVRELGGCS QAGNRHCFEC BACU012077/1-919 MVMAAKKGPG PGGGVGGGKA EAEAASEVWC RRVRELGGCS QAGNRHCFEC ENSP00000300176/1-481 MVMAAKKGPG PGGGVSGGKA EAEAASEVWC RRVRELGGCS QAGNRHCFEC ENSTTRP00000008426/1-483 MVMAAKKGPG PGGGVGGGKA EAEAASEVWC RRVRELGGCS QAGNRHCFEC ENSBTAP00000000957/1-473 MVMAAKKGPG PGGGV---KA EAEAASEVWC RRVRELGGCS QAGNRHCFEC 51 100 bmy_16109T0/1-424 AQRGVTYVDI TVGSFVCTTC SGLLRGLNPP HRVKSISMTT FTEPEVVFLQ BACU012077/1-919 AQRGVTYVDI TVGSFVCTTC SGLLRGLNPP HRVKSISMTT FTEPEVVFLQ ENSP00000300176/1-481 AQRGVTYVDI TVGSFVCTTC SGLLRGLNPP HRVKSISMTT FTEPEVVFLQ ENSTTRP00000008426/1-483 AQRGVTYVDI TVGSFVCTTC SGLLRGLNPP HRVKSISMTT FTEPEVVFLQ ENSBTAP00000000957/1-473 AQRGVTYVDI TVGSFVCTTC SGLLRGLNPP HRVKSISMTT FTEPEVLFLQ 101 150 bmy_16109T0/1-424 SRGNEVCRKI WLGLFDARTS LIPDSRDPQK VKEFLQEKYE KKRWYVPPDQ BACU012077/1-919 SRGNEVCRKI WLGLFDARTS LIPDSRDPQK VKEFLQEKYE KKRWYVPPDQ ENSP00000300176/1-481 SRGNEVCRKI WLGLFDARTS LVPDSRDPQK VKEFLQEKYE KKRWYVPPDQ ENSTTRP00000008426/1-483 SRGNEVCRKI WLGLFDARTS LIPDSRDPQK VKEFLQEKYE KKRXXXXXXX ENSBTAP00000000957/1-473 ARGNEVCRKI WLGLFDARTS LIPDSRDPQK VKEFLQEKYE KKRWYVPPDQ 151 200 bmy_16109T0/1-424 VKGPTYTKGG ASTPVQGSIP EGKPPRTLLG DPVPSLSAAA STSSQVTLRC BACU012077/1-919 VKGPTYTKGG ASTPVQGSIP EGKPPRALLG DPVPSLSAAA STSSQSVSQS ENSP00000300176/1-481 VKGPTYTKGS ASTPVQGSIP EGKPLRTLLG DPAPSLSVAA STSSQPVSQS ENSTTRP00000008426/1-483 XXXXXXXXXX XXXXXXXXXP EGKPPRTLLG DPVPSLSAAA STSSQSVSQS ENSBTAP00000000957/1-473 VKGPTYTKGS TSTPVQGSIP EGKPPRTLLG DPVPSLSAAA SNSSQPVSQ- 201 250 bmy_16109T0/1-424 ALQLILGFGR QGYQFPKSNP LN------LA DDG------P RGVSTFSALL BACU012077/1-919 QPRTSQPRSS QP---PPPSS VKKASTDLLA DIGGDPFAAP QVAPAFAA-- ENSP00000300176/1-481 HARTSQARST QP---PPHSS VKKASTDLLA DIGGDPFAAP QMAPAFAA-- ENSTTRP00000008426/1-483 QPRTSQPRSS QP---PPPSS VKKASTDLLA DIGGDPFAAP QVAPAFAA-- ENSBTAP00000000957/1-473 -PRTSQPRSS QP---PPPSS VKKASTDLLA DIGGDPFAAP QVAPAFAA-- 251 300 bmy_16109T0/1-424 FPCLASLT-- ----LDLYVL EERPQQEVVF REVRVSTSNV TIPPRK---- BACU012077/1-919 FPAFGGQTPS HGGFANFDAF GSSPGSSAFG SMPPAGQAPF QAQPAPPASR ENSP00000300176/1-481 FPAFGGQTPS QGGFANFDAF SSGPSSSVFG SLPPAGQASF QAQPTPA--- ENSTTRP00000008426/1-483 FPAFGGQTPS HGGFANFDAF GSSPGSSAFG SMPPAGQAPF QAQPAPP--- ENSBTAP00000000957/1-473 FPAFGGQTPS HGGFANFDAF GSGPGSSAFG SIPPAGQAPF QAQPAPP--- 301 350 bmy_16109T0/1-424 --------NR GQDTASGACW PTSAETPLLL PRWHQLLLHS QPLGVSETWE BACU012077/1-919 MLPGSHSFGS SQGTPFAASP LAPASQPNSL ADMGSLLGPG ASAG------ ENSP00000300176/1-481 --------GS SQGTPFGATP LAPASQPNSL ADVGSFLGPG VPAA------ ENSTTRP00000008426/1-483 --------GS SQGTPFGASP LAPASQPNSL ADTGSLLGPG ASAG------ ENSBTAP00000000957/1-473 --------GS SQGTPFGASP LAPASQPNSL ADVGSLLGPG ASAG------ 351 400 bmy_16109T0/1-424 ENLPTTYVPI TQGIHSALAL --------CT GMNVMVI-LK YHGWEGGGQM BACU012077/1-919 -GIPSSIFGM ASQVPTLPSA TTGGGG--ST GLSFGAF-NP FTTPAAHAQL ENSP00000300176/1-481 -GVPSSLFGM AGQVPPLQSV TMGGGGGSST GLAFGAFTNP FTAPAAQSPL ENSTTRP00000008426/1-483 -GIPSSMFGM ASQVPTLQSA TTGGGG--ST GLSFGAF-NP FTTPAAHAQL ENSBTAP00000000957/1-473 -GIPSSIFGM AGQVPTLQSA TTGGGG--SP GLAFGAF-NP FTTPAAHTQL 401 450 bmy_16109T0/1-424 STAT------ ITAGISFGSL TRKHGSWGLP A--------- ---------- BACU012077/1-919 PSTNPFQPNG LATGSSFG-- DQGSAKLGQR PLSQPAGIST NPFMPLLRTL ENSP00000300176/1-481 PSTNPFQPNG LAPGPGFG-- MSSAGP-GFP QAVPPTGAFA SS-------- ENSTTRP00000008426/1-483 PSTNPFQPNG LATGPGFG-- MSGAGP-GFP QTVPPTGAFS SPFPPPL--- ENSBTAP00000000957/1-473 PSTNPFQPNG LATGPGFG-- MSGAGP-GFP QTVPPTGAFA SP-------- 451 500 bmy_16109T0/1-424 ---------- ---------- ---------- ---------- ---------- BACU012077/1-919 YCFGSGMKPG DSTTTPEFES ADVALGPPLP WACPADVRLC GHLRKQKSQR ENSP00000300176/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008426/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000957/1-473 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_16109T0/1-424 ---LPLRALE R--------- ---------- ---------- ---------- BACU012077/1-919 RRFFVLRAFP QRLECYESEK KFRAGRAPPK FSVSLEGACT ISPDSHEDPG ENSP00000300176/1-481 ---FPAPLFP PQTPLVQQQN G--------- ---------- ---------- ENSTTRP00000008426/1-483 ---FPPPLFP PPTSVTQQQN G--------- ---------- ---------- ENSBTAP00000000957/1-473 ---FPAPLFP SQTSMTQQQN G--------- ---------- ---------- 551 600 bmy_16109T0/1-424 ----AFFLVS LSVKMGQ--- ---------- ---------- ---------- BACU012077/1-919 AWILAPFQDV WPVTLRPKGL GRARGLGSGG YCLCLGSGVL SLLRKPGGRS ENSP00000300176/1-481 ----SSFGDL GSAKLGQRPL SQPAGISTNP FM-------- ---------- ENSTTRP00000008426/1-483 ----SSFGDQ GSAKLGQRPL SQPAGISTNP FM-------- ---------- ENSBTAP00000000957/1-473 ----SSFGDL GSTKLGQRPL SQPAGISTNP FM-------- ---------- 601 650 bmy_16109T0/1-424 ---------- ---------- ---------- ---------- ---------- BACU012077/1-919 SGASRASPPP ALRLSLLSVR RCGHADAFFF LELGRSAPTG PGELWLQAPD ENSP00000300176/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008426/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000957/1-473 ---------- ---------- ---------- ---------- ---------- 651 700 bmy_16109T0/1-424 ---------- ---------- --GDCHRFHF PCPLPEDQQ- ---------- BACU012077/1-919 AVVAQSIHET VLAAMKRIGD SGAGGRAEPL PRKPPTSAST PSVPQSYETP ENSP00000300176/1-481 ---------- ---------- --TGPSSSPF ASKPPTTNPF L--------- ENSTTRP00000008426/1-483 ---------- ---------- --TGSSSSPF ACNPPNTNPF L--------- ENSBTAP00000000957/1-473 ---------- ---------- --TGSSSSPF AAKPPTTNPF L--------- 701 750 bmy_16109T0/1-424 ---------- ---------- ---------- ---------- ---------- BACU012077/1-919 ASAAQSSGLY RRGRLSERSE QATLKTLARL GAAASHPEGL ERGGVYITKG ENSP00000300176/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008426/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000957/1-473 ---------- ---------- ---------- ---------- ---------- 751 800 bmy_16109T0/1-424 ---------- ---------- ---------- ---------- ---------- BACU012077/1-919 AGSDYEPMGG GQASGYVVMA PPGLPASAKA ASRQPLQDGG VTEYVSMSLC ENSP00000300176/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008426/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000957/1-473 ---------- ---------- ---------- ---------- ---------- 801 850 bmy_16109T0/1-424 ---------- ---------- ---------- ---------- ---------- BACU012077/1-919 APRSFSSSFL PLPYRPGAGE PGPGLQGPRL GVGDDWGPAG AQRCLQPPSE ENSP00000300176/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008426/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000957/1-473 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_16109T0/1-424 ---------- ---------- ---------- ---------- ---------- BACU012077/1-919 LAGEYVCTAA DYIGMGTDIP EPPDGGLNYI DLDLVPPLEV RGDAPGARHR ENSP00000300176/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008426/1-483 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000000957/1-473 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_16109T0/1-424 ---------- ---------- ---------- ------ BACU012077/1-919 PHSYAHIEFQ NLGQAPSSCS IAPESQVSLG PPPCLQ ENSP00000300176/1-481 ---------- ---------- ---------- ------ ENSTTRP00000008426/1-483 ---------- ---------- ---------- ------ ENSBTAP00000000957/1-473 ---------- ---------- ---------- ------