KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:53 2014 Check: 00 .. Name: ENSTTRP00000005471/1-705 Len: 712 Check: 1719 Weight: 1.00 Name: ENSP00000299563/1-708 Len: 712 Check: 8006 Weight: 1.00 Name: ENSBTAP00000000969/1-654 Len: 712 Check: 2388 Weight: 1.00 Name: bmy_01323T0/1-422 Len: 712 Check: 17 Weight: 1.00 Name: BACU019065/1-705 Len: 712 Check: 7544 Weight: 1.00 // 1 50 ENSTTRP00000005471/1-705 MAAAGPSTRA SSAAAAAALN RRGRRGRCDE MAAAKTGTPG PASGPALLVL ENSP00000299563/1-708 MAAAGPSTRA SSAAAAAALS RRGRRGRCDE TAAAKTGAPG PASGPSLLVL ENSBTAP00000000969/1-654 ---------- ---------- ---------- ---------- ---------- bmy_01323T0/1-422 ---------- ---------- ---------- ---------- ---------- BACU019065/1-705 MAAAGPSTRA SSAAAAAALN RRGRRGRCDE MAAAKTGTPG PASGPALLVL 51 100 ENSTTRP00000005471/1-705 PPPLLQPPPP PRPEESDCAG CLETPGEAAA LPCGHSLCRG CAQRAXXXXX ENSP00000299563/1-708 SPPLLQPPLP PRPEESGCAG CLEPPGEAAA LPCGHSLCRG CAQRAADAAG ENSBTAP00000000969/1-654 ----LQPPSP PRPEESDCAG CLETPGEAAA LPCGHSLCRG CAQRAADAAG bmy_01323T0/1-422 ---------- ---------- ---------- ---------- ---------- BACU019065/1-705 PPPLLQPXP- ----EQETRA APAEPGGASS PPLGVR-SEA VAPRPGLVRG 101 150 ENSTTRP00000005471/1-705 XXXX-XXXXX XXXXXXXXXR DNWQPDAEVL GERARRGPPE RCR---SRRD ENSP00000299563/1-708 PGCP-RCRAR GPGWARRRAR DDGQADSEVL GECARRSQPE RCR---PRRD ENSBTAP00000000969/1-654 PCCP-RCRAR GAGWARRRAR DDWQADAEVL GERARRGPPE RCR---PRRD bmy_01323T0/1-422 ---------- ---------- ---------- ---------- ---------- BACU019065/1-705 WRVPGPGPAR AGVESSRRVG TGLCPGADVF LNFELRDEV- RARWIWRQKF 151 200 ENSTTRP00000005471/1-705 GGAAATGPRP EQETRGAPAE PEFIFRAPVK LSKPGELREE YESLRKLREE ENSP00000299563/1-708 GGAAAAGPRP EQEPRAAPAE PDFIFRAPIK LSKPGELREE YESLRKLREE ENSBTAP00000000969/1-654 GGAAAAGPRP EQESRAAPAE PEFIFRAPIK LSKPGEFREE YESLRKLREE bmy_01323T0/1-422 ---------- ---------- ---------- ---------- ---------- BACU019065/1-705 GGSHSISWNK LGPVFSFPFP PEFIFRAPIK LSKPGELREE YESLRKLREE 201 250 ENSTTRP00000005471/1-705 KLQEEKTSED QIHRLLTEDT EMGKRKMDEQ KKRDEPLVLK TNLERCPARL ENSP00000299563/1-708 KLQEEKPSED QIHKLLPEDT ETGKRKMDEQ KKRDEPLVLK TNLERCPARL ENSBTAP00000000969/1-654 KLQEEKTSED QIHKLLPEDT EIGKRKMDEQ KKRDEPVVLK TNLEHCPARL bmy_01323T0/1-422 ---------- ---------- ---------- ---------- ---------- BACU019065/1-705 KLQEEKTSED QIHRLLPEDT EMGKRKVDEQ KKRDEPLVLK TNLERCPARL 251 300 ENSTTRP00000005471/1-705 SDSENEEPSR GKMIQTHRSA FVSKNNSYSL SFLAGNLNSK MERSQSCSDT ENSP00000299563/1-708 SDSENEEPSR GQMTQTHRSA FVSKNNSYSL AFLAGKLNSK VERSQSCSDT ENSBTAP00000000969/1-654 SDSENEEPSR GKMIQTHRSA FVSKSSSYSL AFLAGNLNSK MERSQSCSDT bmy_01323T0/1-422 ---------- ---------- ---------- ---------- MERSQSCSDT BACU019065/1-705 SDSENEEPSR GKMIQTHRSA FVSKNNSYSL SFLAGNLNSK MERSQSCSDT 301 350 ENSTTRP00000005471/1-705 GQDRVKGRLR AAPTSKAKVT TMTPASNPII GVLLSTQNNR CLSAPDLTIE ENSP00000299563/1-708 AQERAKSRVR AVPGNKAKVT TMTPASNPII GVLLSTQNNR CVSAPDLTIE ENSBTAP00000000969/1-654 GQDRAKSRLR AAPTSKAKAT AMTPTSNPII GVLLSTRNHR CLSAPDLTVE bmy_01323T0/1-422 GQDRVKGRLR AAPTSKAKAT TMTPASNPII GVLLSTQNNR CLSAPDLTIE BACU019065/1-705 GQDRVKGRLR AAPTSKAKVT TMTPASNPII GVLLSTQNNR CLSAPDLTIE 351 400 ENSTTRP00000005471/1-705 KRLPFSSLSS LASLHKPERS ISPESNDSIS EELNHFKPIV CSPCTPPKXX ENSP00000299563/1-708 KRLPFSSLSS LASLHKPERS VSPESNDSIS EELNHFKPIV CSPCTPPKRL ENSBTAP00000000969/1-654 KRLPFSSLSA LASLHKPERS ISPESNDSIS EELNHFKPIV CSPCTPPKRL bmy_01323T0/1-422 KRLPFSSLSS LASLHKPERS ISPESNDSIS EELNHFKPIV CSPCTPPKRL BACU019065/1-705 KRLPFSSLSS LASLHKPERS ISPESNDSIS EELNHFKPIV CSPCTPPKRL 401 450 ENSTTRP00000005471/1-705 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000299563/1-708 PDGRVLSPLI IKSTPRNLNR SLQKQTSYEA SPRILKKWEQ IFQERQIKKT ENSBTAP00000000969/1-654 PDGRVLSPLI IKSTPRNLNR SLQKQTSYEA SPRILKKWEQ IFQERQIKKT bmy_01323T0/1-422 PDGRVLSPLI IKSTPRNLNR SLQKQTSYEA SPRILKKWEQ IFQERQIKKT BACU019065/1-705 PDGRVLSPLI IKSTPRNLNR SLQKQTSYEA SPRILKKWEQ IFQERQIKKT 451 500 ENSTTRP00000005471/1-705 XXXXXXXXXX XXXXXXXXXX XVTHSSKK-- LLALNTRLSS GQVLSEYTGP ENSP00000299563/1-708 LSKATLTSLA PEMGEELLGS EGIHSSKEKP LVAVNTRLSG GQVLSEYTGP ENSBTAP00000000969/1-654 LSKATLTSLA PETGDDLLVS EVTQSNKEKP LLALNTRLSS GQVLSECTGP bmy_01323T0/1-422 LSKATLTSLA PETGEDLLVT EVTHSSKEKP LLALNTRLSS GQVLSDYTGP BACU019065/1-705 LSKATLTSLA PETGEDLLVT EVTHSSKEKP LLALNTRLSS GQVLSEYTGP 501 550 ENSTTRP00000005471/1-705 TPTDLDYFPS VSQTKAEQGS DSKRSTEIPL E-CCSSELKV GASGTSLERE ENSP00000299563/1-708 TSADLDHFPS VSQTKAEQDS DNKSSTEIPL ETCCSSELKG GGSGTSLERE ENSBTAP00000000969/1-654 TAPDLDYFSS VSQTKAEQGS DRKKNTEIPL ETCCSSELPV GASGTSLERE bmy_01323T0/1-422 TPTDLDYFPS VSQTKAEQGG DSKRSTEIPL ETCCSSELKV GASGTSLERE BACU019065/1-705 TPTDLDYFPS VSQTKEEQGG DSKRSTEIPL ETCCSSELRV GASGTSLERE 551 600 ENSTTRP00000005471/1-705 QFEGSGSSPD AKLDKTCITT AMKISAVSSV LPKNSVLGGV LKTKKQLKTV ENSP00000299563/1-708 QFEGLGSTPD AKLDKTCISR AMKITTVNSV LPQNSVLGGV LKTKQQLKTL ENSBTAP00000000969/1-654 QSERSGSSPD AKLDKTRITA SMKISAVNSV LPKNSVLGGV LKTKKQLKTV bmy_01323T0/1-422 QFEGSGPSPD AKLDKTCITT TMKISAVNSV LPKNSVLGGV LKTKKQLKTV BACU019065/1-705 QFEGSGSSPD AKLDKTCITT TMRISAVNSV LPKNSVLGGV LKTKKQLKTV 601 650 ENSTTRP00000005471/1-705 NHFDLPNGVL ADSLGEEPLP SLRRGRKRRC KTKHLEQNGS LKKLRQSSGE ENSP00000299563/1-708 NHFDLTNGVL VESLSEEPLP SLRRGRKRHC KTKHLEQNGS LKKLRQTSGE ENSBTAP00000000969/1-654 NHFDLPNGVL ADNLGDEPLP SLRRGRKRRC KTKHLEQNGS LKKLRQSSGE bmy_01323T0/1-422 NHFDLPNGVL ADNLGEEPLP SLRRGRKRRC KTKHLEQNGS LKKLRQSSGE BACU019065/1-705 NHFDLPNGVL ADSLGEEPLP PLRRGRKRRC KTKHLEQNGS LKKLRQGSGE 651 700 ENSTTRP00000005471/1-705 VGLAPADPVL REMEQKLQQE EEDRQLALQL QRMFDNERRT VSRRKGSMDQ ENSP00000299563/1-708 VGLAPTDPVL REMEQKLQQE EEDRQLALQL QRMFDNERRT VSRRKGSVDQ ENSBTAP00000000969/1-654 VGLAPTDPVL REMEQKLQQE EEDRQLALQL QRMFDNERRT VSRRKGSVDQ bmy_01323T0/1-422 VGLAPADPVL REMEQKLQQE EEDRQLALHL QRVFDSERRT VSRRKGSVDQ BACU019065/1-705 VGLAPADPVL REMEQKLQQE EEDRQLALHL QRMFDSERRT VSRRKGSVDQ 701 750 ENSTTRP00000005471/1-705 YLLRSSSMAG AK ENSP00000299563/1-708 YLLRSSNMAG AK ENSBTAP00000000969/1-654 YLLRSSSMAG AK bmy_01323T0/1-422 YLLRSSSMAG AK BACU019065/1-705 YLLRSSSMAG AK