KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:54 2014 Check: 00 .. Name: ENSBTAP00000000971/1-417 Len: 494 Check: 890 Weight: 1.00 Name: ENSP00000301744/1-424 Len: 494 Check: 8602 Weight: 1.00 Name: ENSTTRP00000008542/1-415 Len: 494 Check: 2666 Weight: 1.00 Name: bmy_02770T0/1-334 Len: 494 Check: 7348 Weight: 1.00 Name: BACU019528/1-418 Len: 494 Check: 6566 Weight: 1.00 // 1 50 ENSBTAP00000000971/1-417 ---------- ---------- ---------- -MASTHPTAE AHGPVLFEDL ENSP00000301744/1-424 ---------- ---------- ---------- -MASMPPTPE AQGPILFEDL ENSTTRP00000008542/1-415 ---------- ---------- ---------- -MASTLSTSG AQ-PVLFEDL bmy_02770T0/1-334 MGAGRIRRLS RQVQHLSRSP CGDLKTLPPL KMASTLPTTG TQGPVLFEDL BACU019528/1-418 ---------- ---------- ---------- -MASTLPATG AQGPVLFEDL 51 100 ENSBTAP00000000971/1-417 AVYFSQEECA SLHPAQRSLS GEVTQECFED KAL-SENDKI EINQLLHLES ENSP00000301744/1-424 AVYFSQEECV TLHPAQRSLS KDGTKESLED AALMGEEGKP EINQQLSLES ENSTTRP00000008542/1-415 AVYFS-EECV SQHPAQRSRS RXXXXXXXXX XXXXXGEGKI EINQKLRLES bmy_02770T0/1-334 AVYFSQEECV SLHPAQRSCS RDTPQECLED MALMGGEGKI EINQKLRLES BACU019528/1-418 AVYFSQEECV SLHPAQRSCS RDTPQECLED MALMGGEGKI EINQKLRLES 101 150 ENSBTAP00000000971/1-417 MGLEELALEK CSLAVPLIYY QEKCSEHGAG NFERKISGGI SACKKRFRSL ENSP00000301744/1-424 MELDELALEK YPIAAPLVPY PEKSSEDGVG NPEAKILSGT PTYKRRVISL ENSTTRP00000008542/1-415 MGLEELALEK YSIAVPLVYY PEKSSEHGVG NLERKMSGRT PACKKSFISL bmy_02770T0/1-334 MGLEELALEK YSIAVPLVYY PENSSEHGVG NLERKMS--- ---------- BACU019528/1-418 MGLEELALEK YSIAVPLVYY PENSSEHGVG NLERKMSGRT PAFKKRFISL 151 200 ENSBTAP00000000971/1-417 LVTIENHTPK IELAQSLRTR ALPKILPFPK EETKKSYKCP ECDQSFSGSS ENSP00000301744/1-424 LVTIENHTPL VELSEYLGTN TLSEILDSPW EGAKNVYKCP ECDQNFSDHS ENSTTRP00000008542/1-415 LVTIENHTPL IELSQCLGTR ALSEILEFPG EEAKNSYKCP ECDQSFSDSS bmy_02770T0/1-334 ---------- ---------- ---------- ---------- ---------- BACU019528/1-418 LVTIENHTPL IELSQCLGTR ALSEILEFPG EEAKNSYKCP ECDQSFSDSS 201 250 ENSBTAP00000000971/1-417 YLVWHQKTHV GKKKCECDDC GKIFNHRSNL RAHRRIHTGE KPYKCFLPVW ENSP00000301744/1-424 YLVLHQKIHS GEKKHKCGDC GKIFNHRANL RTHRRIHTGE KPYKC----- ENSTTRP00000008542/1-415 YPVLHQKTHS GEKKYKCGDW EKIFNHRANL RTHQRIHTGE KPFKC----- bmy_02770T0/1-334 ---------- ---------- ---------- ---------- ---------- BACU019528/1-418 YLVLHQKMHS GEKKYKCGDC GKIFNHRANL RTHQRIHTGE KPYKC----- 251 300 ENSBTAP00000000971/1-417 SAAQCGSSFH QPSHLSQHRK THLKEKIHRC GICGRGLTQL RGLSQHQKTH ENSP00000301744/1-424 --AKCSASFR QHSHLSRHMN SHVKEKPYTC SICGRGFMWL PGLAQHQKSH ENSTTRP00000008542/1-415 --AECGGSFR QHSHLSRHMN IHVKEKPYTC GICGRGFLWL PGLAQHQKTH bmy_02770T0/1-334 ---------- ---------- ---------- ---------- -GLAQHQKTH BACU019528/1-418 --AECGSSFR QHSHLSRHMN IHVKEKPYTC GICGRGFMWL PGLAQHQKTH 301 350 ENSBTAP00000000971/1-417 TATKA----- GDKYVSQKTN LALPEEKHRC A-----APAG NALGSP---C ENSP00000301744/1-424 SAENTYESTN CDKHFNEKPN LALPEETFVS GPQYQHTKCM KSFRQSLYPA ENSTTRP00000008542/1-415 TAKKA----- CGKYFGQKTN LALPEKRHGS ASRHPCSLSR KCFGQPSHLA bmy_02770T0/1-334 AAKKA----- CGKYFGQKTN LALPEKRHGS ASQHPCSPSG KCFGQPSHLA BACU019528/1-418 TAKKA----- CGKYFGQKTN LALPEKRHGS ASQHPCSPSG KRFGQPSHLA 351 400 ENSBTAP00000000971/1-417 IPAQERPQDN LNTTAIEEIL LSFSKFKPLK CSTCSKTFLS ASELISHQNI ENSP00000301744/1-424 LSEKSHDEDS ERCSDDGDNF FSFSKFKPLQ CPDCDMTFPC FSELISHQNI ENSTTRP00000008542/1-415 LPEWGHEDNP EHCSDCGENL LSFSKFEPLK RPECSLTFLR ISELISHQSI bmy_02770T0/1-334 LPERGHEDNP EHCSDCGENL LSFSKFEPLK CPECSMTFLC ISELISHQSI BACU019528/1-418 LPERGHEDNP EHCSDCGENL LSFSKFEPLK CPECSMTFLR ISELISHQSI 401 450 ENSBTAP00000000971/1-417 HRGEKPHKPK TCTESFILDS ELTCHQKSHV REEPFKYTRC GRNFRLKTHL ENSP00000301744/1-424 HTEERPHKCK TCEESFALDS ELACHQKSHM LAEPFKCTVC GKTFKSNLHL ENSTTRP00000008542/1-415 HRGEKPHKCK PCAECFILDS KLACHQKNHT -GEPFKCTMC GKSFRLKTHL bmy_02770T0/1-334 HRGEKPHKCK PCAESFISYS ELACHQKNHT -GEPFKCTVC GKSFRLKTHL BACU019528/1-418 HRGEKPHKCK PCAESFISDS ELACHQKNHT -GERFKCTVC GKSFRLKTHL 451 500 ENSBTAP00000000971/1-417 TLDQQTHSQN TV-------- ---------- ---------- ---- ENSP00000301744/1-424 ITHKRTHIKN TT-------- ---------- ---------- ---- ENSTTRP00000008542/1-415 IVHQQIHAQN T--------- ---------- ---------- ---- bmy_02770T0/1-334 IVHQQTHAQN TTSTVETLCS ILEDYAKPPQ EIRKISFTKT LIYT BACU019528/1-418 IVHQQTHAQN TT-------- ---------- ---------- ----