KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:55 2014 Check: 00 .. Name: ENSP00000314196/1-435 Len: 439 Check: 9974 Weight: 1.00 Name: ENSBTAP00000000986/1-435 Len: 439 Check: 119 Weight: 1.00 Name: ENSTTRP00000011769/1-330 Len: 439 Check: 2445 Weight: 1.00 Name: bmy_08243T0/1-438 Len: 439 Check: 6738 Weight: 1.00 Name: BACU005216/1-383 Len: 439 Check: 4743 Weight: 1.00 // 1 50 ENSP00000314196/1-435 -MEWLWLFFL HPISFYQGAA FPFALLFNYL CIMDSFSTRA RYLFLLTGGG ENSBTAP00000000986/1-435 -MDWLQLFFL DPVSLYQGAA FPFALLFNHL CVMDSFSTQA RYLFLLAGGS ENSTTRP00000011769/1-330 ---------- ---------- ---------- ---------- ---------- bmy_08243T0/1-438 MMDWLQLFFL HPVSLYQGAA FPFALLFNYL CIMDSFSTHA RYLFLLAGGG BACU005216/1-383 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000314196/1-435 ALAVAAMGSY AVLVFTPAVC AVALLCSLAP QQVHRWTFCF QMSWQTLCHL ENSBTAP00000000986/1-435 ALAVAAMGAF AVLVFIPALC TVVLIHSLGP QDVHRPTFLF QMTWQTLCHL ENSTTRP00000011769/1-330 ---------- ---------- ---------- -TLKKKSF-- ---------- bmy_08243T0/1-438 ALAVAAMGSF AVLVFIPALC TVVLIHSLGP QDVHRLTFLF QMSWQTLCHL BACU005216/1-383 ------MGSF AVLVFIPALC TVVLIHSLGP QDVHRLTFLF QMSCQTLCHL 101 150 ENSP00000314196/1-435 GLHYTEYYLH EPPSVRFCIT LSSLMLLTQR VTSLSLDICE GKV-KAAS-- ENSBTAP00000000986/1-435 GLHYTEYYLQ EAPSTRFCIT LSSLMLLTQK ITSLSLDIRE GKV-VAPS-- ENSTTRP00000011769/1-330 ---------- -----RFCVT LSSLMLLTQR VTSLSLDIRE GKV-AAATAG bmy_08243T0/1-438 GLHYTEYYLQ EAPSTRFCIT LSSLMLLTQR VTSLSLDIRE GKV-AAAAAA BACU005216/1-383 GLHYTEYYLQ EAPSTRFYVT LSSLMLLTQR VTSLSLDIRE GKVAAAAAAA 151 200 ENSP00000314196/1-435 GGFRSRSSLS EHVCKALPYF SYLLFFPALL GGSLCSFQRF QARVQGSSAL ENSBTAP00000000986/1-435 GRIPNKNSLS EHLHAALPYL SYLLFFPALL GGPLCSFQRF QARVEGSSSL ENSTTRP00000011769/1-330 GGIRNRSSLS ERLWGALPYF SYLLFFPALL GGPLCSFQRF QARVQGPSSL bmy_08243T0/1-438 GGVRNKSCLS ERLWKALPYF SYLLFFPALL GGPLCSFQRF QARVQGPSSL BACU005216/1-383 GDVRNKSSLS ERLWKALPYF SYLLFFPALL GGPLCSFQRF QARVQGPSSL 201 250 ENSP00000314196/1-435 HPRHSFWALS WRGLQILGLE CLNVAVSRVV DAGAGLTDCQ QFECIYVVWT ENSBTAP00000000986/1-435 WSRHSFWALT WRALQILGLE SLKVIVSGVV GVGAGLGGCR QLQCVFVLWS ENSTTRP00000011769/1-330 YPRHSFWALT RRGLQILGLE CLKVVVRRAV STGAGLTDCR QLQCVYVTWS bmy_08243T0/1-438 YPRHSFWALT RRGLQILGLE CLKVVVRRAV SAGAGLXDCR QLQCVYVTWS BACU005216/1-383 YPRHSFWALT RRGLQILGLE CLKVVVRREV SAGTGLTDCR QLQCVYVMWS 251 300 ENSP00000314196/1-435 TAGLFKLTYY SHWILDDSLL HAAGFGPELG QSPGEEGYVP DADIWTLERT ENSBTAP00000000986/1-435 TAGLFKLTYY SHWLLDDALL RAAGFGSELG RSPGEEGLLP DADIWTLETT ENSTTRP00000011769/1-330 TAGLLKLTYY SHWLLDDSLL YAAGFGSEFG QSPGEEGYIP DADIWTLETT bmy_08243T0/1-438 TAGLFKLTYY SHWLLDDSLL YAAGFGSEFG QSPGEEGYIP DADIWTLETT BACU005216/1-383 TAGLFKLTYY SHWLLDDSLL YAAGFASEFG QSPGEEGYIP DADIWTLETT 301 350 ENSP00000314196/1-435 HRISVFSRKW NQSTARWLRR LVFQHSRAWP LLQTFAFSAW WHGLHPGQVF ENSBTAP00000000986/1-435 HRIALFARKW NQSTARWLRR LVFQQRRTWP LLQTFLFSAW WHGLHPGQVF ENSTTRP00000011769/1-330 HRIALFTRKW NQSTARWLRR LVFQQGRTWP LLQTFVFSAW WHGLHPGQVF bmy_08243T0/1-438 HRIALFTRKW NQSTARWLRR LIFQQGRTWP LLQTFVFSAW WHGLHPGQVF BACU005216/1-383 HRIALFTRKW NQSTARWLRR LVFQQGRTWP LLQTFVFSAW WHGLHPGQVF 351 400 ENSP00000314196/1-435 GFVCWAVMVE ADYLIHSFAN EFIRSWPMRL FYRTLTWAHT QLIIAYIMLA ENSBTAP00000000986/1-435 GFLCWAVMVE ADYLIHAFAS VFISSWPMRL LYRALAWAHT QLIIAYIMLA ENSTTRP00000011769/1-330 GFLCWAVMVE ADYLIHTFAN VFIRSGPMRV LYRTLTWAHT QLILAYIMLA bmy_08243T0/1-438 GFLCWAVMVE ADYLIHTFAN VFIRSWPMRV LYRILTWAHT QLIIAYIMLA BACU005216/1-383 GFLCWAVMVE ADYLIHTFAN VFIRSWPMRV LYRILTWAHT QLIIAYIMLA 401 450 ENSP00000314196/1-435 VEVRSLSSLW LLCNSYNSVF PMVYCILLLL LAKRKHKCN ENSBTAP00000000986/1-435 VEARSLSSLW LLWNSYSSVF PTVYCILLLL LAKRKHKCN ENSTTRP00000011769/1-330 VEVRSLSSLW LLWNSYNSVF PTVYCILLFV LAKRKHKFN bmy_08243T0/1-438 VEVRSLSSLW LLWNSYNSVF PTVYCILLFF LAKRKHKFN BACU005216/1-383 VEVRSLSSLW LLWNSYNSVF PTVYCILLFF LAKRKHKFN