KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:56 2014 Check: 00 .. Name: ENSBTAP00000000991/1-577 Len: 577 Check: 9884 Weight: 1.00 Name: ENSP00000311827/1-577 Len: 577 Check: 9619 Weight: 1.00 Name: bmy_08885T0/1-536 Len: 577 Check: 1752 Weight: 1.00 Name: ENSTTRP00000009893/1-427 Len: 577 Check: 1932 Weight: 1.00 Name: BACU003175/1-530 Len: 577 Check: 2618 Weight: 1.00 // 1 50 ENSBTAP00000000991/1-577 MNPVNATALY ISASRLVLNY DPGDPKAFTE INRLLPYFRQ SLSCCVCGHL ENSP00000311827/1-577 MNPVNATALY ISASRLVLNY DPGDPKAFTE INRLLPYFRQ SLSCCVCGHL bmy_08885T0/1-536 ---------- ---------- ---------- ---------- -MLCTESRHL ENSTTRP00000009893/1-427 MNPVNATALY ISASRLVLNY DPGDPKAFTE INRLLPYFRQ SLSCCVCGHL BACU003175/1-530 ---------- ---------- ---------- ---------- -------GHL 51 100 ENSBTAP00000000991/1-577 LQDPIAPTNS TCQHYVCKSC KGKKMMMKPS CSWCKDYEQF EENKQLSILV ENSP00000311827/1-577 LQDPIAPTNS TCQHYVCKTC KGKKMMMKPS CSWCKDYEQF EENKQLSILV bmy_08885T0/1-536 LQDPIAPTNS TCQHYVCKSC KGKKMMMKPS CSWCKDYEQF EENKQLSILV ENSTTRP00000009893/1-427 LQDPIAPTNS TCQHYVCKSC KGKKMMMKPS CSWCKDYEQF EENKQLSILV BACU003175/1-530 LQDPIAPTNS TCQHYVCKSC KGKKMMMKPS CSWCKDYEQF EENKQLSILV 101 150 ENSBTAP00000000991/1-577 NCYKKLCEYI TQTALARDII EAVDCSSDIL ALLNDGSLFG EETEKPSDSS ENSP00000311827/1-577 NCYKKLCEYI TQTTLARDII EAVDCSSDIL ALLNDGSLFC EETEKPSDSS bmy_08885T0/1-536 NCYKKLCEYI TQTTLARDII EAVDCSSDIL ALLNDGSLFC EETEKPSDSS ENSTTRP00000009893/1-427 NCYKKLCEYI TQTTLARDII EAVDCSSDIL ALLNDGSLFC EETEKPSDSS BACU003175/1-530 NCYKKLCEYI TQTTLARDII EAVDCSSDIL ALLNDGSLFC EETEKPSDSS 151 200 ENSBTAP00000000991/1-577 FTLCLTHSPL PSTSEPTTDP QASLSPISES TLSIAIGSSV INGLPTYNGL ENSP00000311827/1-577 FTLCLTHSPL PSTSEPTTDP QASLSPMSES TLSIAIGSSV INGLPTYNGL bmy_08885T0/1-536 FTLCLTHSPL PSTSEPTTDP QASLSPVSES TLSIAIGSSV INGLPTYNGL ENSTTRP00000009893/1-427 FTLCLTHSPL PSTSEPTTDP QASLSPVSES TLSIAIGSSV INGLPTYNGL BACU003175/1-530 FTLCLTHSPL PSTSEPTTDP QASLSPVSES TLSIAIGSSV INGLPTYNGL 201 250 ENSBTAP00000000991/1-577 SIDRFGINIP SPEHSNTIDV CNTVDIKTED LSDSLPPVCD TVASDLCSTG ENSP00000311827/1-577 SIDRFGINIP SPEHSNTIDV CNTVDIKTED LSDSLPPVCD TVATDLCSTG bmy_08885T0/1-536 SIDRFGINIP SPEHSNTIDV CNTVDIKTED LSDSLPPVCD TVATDLCSTG ENSTTRP00000009893/1-427 SIDRFGINIP SPEHSNTIDV CNTVDIKTED LSDSLPPVCD TVATDLCSTG BACU003175/1-530 SIDRFGINIP SPEHSNTIDV CNTVDIKTED LSDSLPPVCD TVATDLCSTG 251 300 ENSBTAP00000000991/1-577 IDICSFSEDI KPGDSLLLSV EEVLRSLETV SNTEVCCPNL QPNLEATVSN ENSP00000311827/1-577 IDICSFSEDI KPGDSLLLSV EEVLRSLETV SNTEVCCPNL QPNLEATVSN bmy_08885T0/1-536 IDICSFSEDI KPGDSLLLSV EEVLRSLETV SNTEVCCPNL QPNLEATVSN ENSTTRP00000009893/1-427 IDICSFSEDI KPGDSLLLSV EEVLRSLETV SNTEVCCPNL QPNLEATVSN BACU003175/1-530 IDICSFSEDI KPGDSLLLSV EEVLRSLETV SNTEVCCPNL QPNLEATVSN 301 350 ENSBTAP00000000991/1-577 GPFLQLSSQS LSHNVFMSTS PALHGLSCTA ATPKVAKLNR KRSRSESDSE ENSP00000311827/1-577 GPFLQLSSQS LSHNVFMSTS PALHGLSCTA ATPKIAKLNR KRSRSESDSE bmy_08885T0/1-536 GPFLQLSSQS LSHNVFMSTS PALHGLSCTA ATPKVAKLNR KRSRSESDSE ENSTTRP00000009893/1-427 GPFLQLSSQS LSHNVFMSTS PALHGLSCTA ATPKVAKLNR KRSRSESDSE BACU003175/1-530 GPFLQLSSQS LSHNVFMSTS PALHGLSCTA ATPKVAKLNR KRSRSESDSE 351 400 ENSBTAP00000000991/1-577 KVQPLPISTI IRGPTLGASA PVTVKRESKI SLQPIATVPN GGTTPKISKT ENSP00000311827/1-577 KVQPLPISTI IRGPTLGASA PVTVKRESKI SLQPIATVPN GGTTPKISKT bmy_08885T0/1-536 KVQPLPISTI IRGPTLGASA PVTVKRESKI SLQPIATVPN GGTTPKISKT ENSTTRP00000009893/1-427 KVQPLPISTI IRGPTLGASA PVTVKRESKI SLQPIATVPN GGTTPKISKT BACU003175/1-530 KVQPLPISTI IRGPTLGASA PVTVKRESKI SLQPIATVPN GGTTPKISKT 401 450 ENSBTAP00000000991/1-577 VLLSTKSMKK SHEHGSKKSH SKTKPGILKK DKTVKEKIPS HHFMPGSPTK ENSP00000311827/1-577 VLLSTKSMKK SHEHGSKKSH SKTKPGILKK DKAVKEKIPS HHFMPGSPTK bmy_08885T0/1-536 VLLSAKSMKK SHEHGSKKSH SKTKPGILKK DKTVKEKIPS HHFMPGSPTK ENSTTRP00000009893/1-427 VLLSAKSMKK SHEHGSKKSH SKTKPGI--- ---------- ---------- BACU003175/1-530 VLLSAKSMKK SHEHGSKKSH SKTKPGILKK DKTVKEKIPS HHFMPGSPTK 451 500 ENSBTAP00000000991/1-577 TVYKKPQEKK GCKCGRATQN PSVLTCRGQR CPCYSNRKAC LDCICRGCQN ENSP00000311827/1-577 TVYKKPQEKK GCKCGRATQN PSVLTCRGQR CPCYSNRKAC LDCICRGCQN bmy_08885T0/1-536 TVYKKPQEKK GCKCGRATQN PSVLTCRGQR CPCYSNRKAC LDCICRGCQN ENSTTRP00000009893/1-427 ---------- ---------- ---------- ---------- ---------- BACU003175/1-530 TVYKKPQEKK GCKCGRATQN PSVLTCRGQR CPCYSNRKAC LDCICRGCQN 501 550 ENSBTAP00000000991/1-577 SYMANGEKKL EAFAVPEKAL EQTRLTLGIN VTSIAVRNAS TSTSVINVTG ENSP00000311827/1-577 SYMANGEKKL EAFAVPEKAL EQTRLTLGIN VTSIAVRNAS TSTSVINVTG bmy_08885T0/1-536 SYMANGEKKL EAFAVPEKAL EQTRLTLGIN VTSIAVRNAS TSTSVINVTG ENSTTRP00000009893/1-427 ---------- ---------- ---------- ---------- ---------- BACU003175/1-530 SYMANGEKKL EAFAVPEKAL EQTRLTLGIN VTSIAVRNAS TSTSVINVTG 551 600 ENSBTAP00000000991/1-577 SPVTTFLAAS THDDKSLDEA IDMRFDC ENSP00000311827/1-577 SPVTTFLAAS THDDKSLDEA IDMRFDC bmy_08885T0/1-536 SPVTTFLAAS THDDKSLDEA IDMRFDC ENSTTRP00000009893/1-427 ---------- ---------- ------- BACU003175/1-530 SPVTTFLAAS THDDKSLDEA IDMRFDC