KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:57 2014 Check: 00 .. Name: ENSBTAP00000000994/1-836 Len: 836 Check: 2702 Weight: 1.00 Name: ENSP00000263754/1-832 Len: 836 Check: 8474 Weight: 1.00 Name: ENSTTRP00000001296/1-731 Len: 836 Check: 6923 Weight: 1.00 Name: bmy_13199T0/1-666 Len: 836 Check: 1493 Weight: 1.00 Name: BACU009989/1-675 Len: 836 Check: 5639 Weight: 1.00 // 1 50 ENSBTAP00000000994/1-836 RGGVGGAGEG VGGAGEGVGG ARGGGGRSRG VGGAGEGVGG ARGGVGGAGE ENSP00000263754/1-832 MSEAGGAGPG GCGAGAGAGA GPGALPPQPA ALPPAPPQGS PCAAAAG-GS ENSTTRP00000001296/1-731 ---------- ---------- ---------- ---------- ---------- bmy_13199T0/1-666 ---------- ---------- ---------- ---------- ---------- BACU009989/1-675 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000000994/1-836 GVGGARGGVG GAGEGVGGAR GGSGRKSLMD GLCRCSLGAV VPERRAQSSL ENSP00000263754/1-832 GACGPATAVA AAGTAEGPGG GGSARIAVKK AQLRSAPRAK KLEKLGVYSA ENSTTRP00000001296/1-731 ---------- ---------- ---------- ---------- ---------- bmy_13199T0/1-666 ---------- ---------- ---------- ---------- ---------- BACU009989/1-675 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000000994/1-836 CEAEESCKCN GWKNPNPSPT PPRADLQQII VSLTESCRSC SHALAAHVSH ENSP00000263754/1-832 CKAEESCKCN GWKNPNPSPT PPRADLQQII VSLTESCRSC SHALAAHVSH ENSTTRP00000001296/1-731 --AEESCKCN GWKNPNPSPT PPRADLQQII VSLTESCRSC SHALAAHVSH bmy_13199T0/1-666 ---------- ---------- ---------- ---------- ---------- BACU009989/1-675 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000000994/1-836 LENVSEEEMN RLLGIVLDVE YLFTCVHREE DADTKQVYFY LFKLLRKSIL ENSP00000263754/1-832 LENVSEEEMN RLLGIVLDVE YLFTCVHKEE DADTKQVYFY LFKLLRKSIL ENSTTRP00000001296/1-731 LENVSEEEMN RLLGIVLDVE YLFTCVHKEE DADTKQVYFY LFKLLRKSIL bmy_13199T0/1-666 --------MN RLLGIVLDVE YLFTCVHKEE DADTKQVYFY LFKLLRKSIL BACU009989/1-675 --------MN RLLGIVLDVE YLFTCVHKEE DADTKQVYFY LFKLLRKSIL 201 250 ENSBTAP00000000994/1-836 QRGKPVVEGS LEKKPPFEKP SIEQGVNNFV QYKFSHLPPK ERQTIVELAK ENSP00000263754/1-832 QRGKPVVEGS LEKKPPFEKP SIEQGVNNFV QYKFSHLPAK ERQTIVELAK ENSTTRP00000001296/1-731 QRGKPVVEGS LEKKPPFEKP SIEQGVNNFV QYKFSHLPSK ERQTIVELAK bmy_13199T0/1-666 QRGKPVVEGS LEKKPPFEKP SIEQGVNNFV QYKFSHLPSK ERQTIVELAK BACU009989/1-675 QRGKPVVEGS LEKKPPFEKP SIEQGVNNFV QYKFSHLPSK ERQTIVELAK 251 300 ENSBTAP00000000994/1-836 MFLNRINYWH LEAPSQRRLR SPNDDISGYK ENYTRWLCYC NVPQFCDSLP ENSP00000263754/1-832 MFLNRINYWH LEAPSQRRLR SPNDDISGYK ENYTRWLCYC NVPQFCDSLP ENSTTRP00000001296/1-731 MFLNRINYWH LEAPSQRRLR SPNDDISGYK ENYTRWLCYC NVPQFCDSLP bmy_13199T0/1-666 MFLNRINYWH LEAPSQRRLR SPNDDISGYK ENYTRWLCYC NVPQFCDSLP BACU009989/1-675 MFLNRINYWH LEAPSQRRLR SPNDDISGYK ENYTRWLCYC NVPQFCDSLP 301 350 ENSBTAP00000000994/1-836 RYETAQVFGR TLLRSVFTVM RRQLLEQARQ EKDKLPLEKR TLILTHFPKF ENSP00000263754/1-832 RYETTQVFGR TLLRSVFTVM RRQLLEQARQ EKDKLPLEKR TLILTHFPKF ENSTTRP00000001296/1-731 RYETAQVFGR TLLRSVFTVM RRQLLEQARQ EKDKLPLEKR TLILTHFPKF bmy_13199T0/1-666 RYETAQVFGR TLLRSVFTVM RRQLLEQARQ EKDKLPLEKR TLILTHFPKF BACU009989/1-675 RYETAQVFGR TLLRSVFTVM RRQLLEQARQ EKDKLPLEKR TLILTHFPKF 351 400 ENSBTAP00000000994/1-836 LSMLEEEVYS QNSPIWDQDF LSASSRTSQL GIQTVISPPP VAGTVSYNSS ENSP00000263754/1-832 LSMLEEEVYS QNSPIWDQDF LSASSRTSQL GIQTVINPPP VAGTISYNST ENSTTRP00000001296/1-731 LSMLQEEVYS PNSPIWDQDF LSASSKTSQL GIQTVINPPP VAGTVTFNSN bmy_13199T0/1-666 LSMLEEEVYS QNSPIWDQDF LSASSRTSQL GIQTVINPPP VAGTVTFNSN BACU009989/1-675 LSMLEEEVYS QNSPIWDQDF LSASSRTSQL GIQTVINPPP VAGTVTFNSN 401 450 ENSBTAP00000000994/1-836 SASLEQQNGG SASPSCRGAS GLEANPDHQG EKRKMNESHV LEETKKPRVM ENSP00000263754/1-832 SSSLEQPNAG SSSPACKASS GLEANP---G EKRKMTDSHV LEEAKKPRVM ENSTTRP00000001296/1-731 SASLEQQNGG SNSPSCKGAS GLEANP---G EKRKMNDSHV LEEAKKPRVM bmy_13199T0/1-666 SASLEQQNGG SNSPSCKGAS GLEANP---G EKRKMNDSHV LEEAKKPRVM BACU009989/1-675 SASLEQQNGG SNSPSCKGAS GLEANP---G EKRKMNDSHV LEEAKKPRVM 451 500 ENSBTAP00000000994/1-836 GDIPLELIHE VMSTITDPTA MLGPETNFLS AHSARDEAAR LEERRGVIEF ENSP00000263754/1-832 GDIPMELINE VMSTITDPAA MLGPETNFLS AHSARDEAAR LEERRGVIEF ENSTTRP00000001296/1-731 GDIPLELIHE VMSTITDPAA MLGPETNFLS AHSARDEAAR LEERRGVIEF bmy_13199T0/1-666 GDIPLELIHE VMSTITDPAA MLGPETNFLS AHSARDEAAR MEERRGVIEF BACU009989/1-675 GDIPLELIHE VMSTITDPAA MLGPETNFLS AHSARDEAAR MEERRGVIEF 501 550 ENSBTAP00000000994/1-836 HVVGNSLSQK PNKKVLMWLV GLQNVFSHQL PRMPKEYITR LVFDPKHKTL ENSP00000263754/1-832 HVVGNSLNQK PNKKILMWLV GLQNVFSHQL PRMPKEYITR LVFDPKHKTL ENSTTRP00000001296/1-731 HVVGNSLNQK PNKKILIWLV GLQNVFSHQL PRMPKEYITR LVFDPKHKTL bmy_13199T0/1-666 HVVGNSLNQK PNKKILIWLV GLQNVFSHQL PRMPKE---- -----KHKTL BACU009989/1-675 HVVGNSLNQK PNKKILIWLV GLQNVFSHQL PRMPKEYITR LVFDPKHKTL 551 600 ENSBTAP00000000994/1-836 ALIKDGRVIG GICFRMFPSQ GFTEIVFCAV TSNEQVKGYG THLMNHLKEY ENSP00000263754/1-832 ALIKDGRVIG GICFRMFPSQ GFTEIVFCAV TSNEQVKGYG THLMNHLKEY ENSTTRP00000001296/1-731 ALIKDGRVIG GICFRMFPSQ GFTEIVFCAV TSNEQVKGYG THLMNHLKEY bmy_13199T0/1-666 ALIKDGRVIG GICFRMFPSQ GFTEIVFCAV TSNEQVKGYG THLMNHLKEY BACU009989/1-675 ALIKDGRVIG GICFRMFPSQ GFTEIVFCAV TSNEQVKGYG THLMNHLKEY 601 650 ENSBTAP00000000994/1-836 HIKHDILNFL TYADEYAIGY FKKQGFSKEI KIPKTKYVGY IKDYEGATLM ENSP00000263754/1-832 HIKHDILNFL TYADEYAIGY FKKQGFSKEI KIPKTKYVGY IKDYEGATLM ENSTTRP00000001296/1-731 HIKHDILNFL TYADEYAIGY FKKQGFSKEI KIPKTKYVGY IKDYEGATLM bmy_13199T0/1-666 HIKHDILNFL TYADEYAIGY FKKQGFSKEI KIPKTKYVGY IKDYEGATLM BACU009989/1-675 HIKHDILNFL TYADEYAIGY FKKQGFSKEI KIPKTKYVGY IKDYEGATLM 651 700 ENSBTAP00000000994/1-836 GCELNPRIPY TEFSVIIKKQ KEIIKKLIER KQAQIRKVYP GLSCFKDGVR ENSP00000263754/1-832 GCELNPRIPY TEFSVIIKKQ KEIIKKLIER KQAQIRKVYP GLSCFKDGVR ENSTTRP00000001296/1-731 GCELNPQIPY TEFSVIIKKQ KEIIKKLIER KQAQIRKVYP GLSCFKDGVR bmy_13199T0/1-666 GCELNPRIPY TEFSVIIKKQ KEIIKKLIER KQAQIRKVYP GLSCFKDGVR BACU009989/1-675 GCELNPRIPY TEFSVIIKKQ KEIIKKLIER KQAQIRKVYP GLSCFKDGVR 701 750 ENSBTAP00000000994/1-836 QIPIESIPGI RETGWKPSGR ERSKEARDPD QLYSTLRSIL QQVKSHQSAW ENSP00000263754/1-832 QIPIESIPGI RETGWKPSGK EKSKEPRDPD QLYSTLKSIL QQVKSHQSAW ENSTTRP00000001296/1-731 QIPIESIPGI RETGWKPSGK EKSKEPKDPD QLYSTLKSIL QQVKSHQSAW bmy_13199T0/1-666 QIPIESIPGI RETGWKPSGK EKSKEPKDPD QLYSTLKSIL QQVKSHQSAW BACU009989/1-675 QIPIESIPGI RETGWKPSGK EKSKEPRDPD QLYSTLKSIL QQVKSHQSAW 751 800 ENSBTAP00000000994/1-836 PFMEPVKRTE APGYYEVIRF PMDLKTMSER LKNRYYVSKK LFMADLQRVF ENSP00000263754/1-832 PFMEPVKRTE APGYYEVIRF PMDLKTMSER LKNRYYVSKK LFMADLQRVF ENSTTRP00000001296/1-731 PFMEPVKRTE APGYYEVIRF PMDLKTMSER LKNRYYVSKK LFMADLQRVF bmy_13199T0/1-666 PFMEPVKRTE APGYYEVIRF PMDLKTMSER LKNRYYVSKK LFMADLQRVF BACU009989/1-675 PFMEPVKRTE APGYYEVIRF PMDLKTMSER LKNRYYVSKK LFMADLQRVF 801 850 ENSBTAP00000000994/1-836 TNCKEYNPPE SEYYKCASIL EKFFFSKIKE AGLIDK ENSP00000263754/1-832 TNCKEYNPPE SEYYKCANIL EKFFFSKIKE AGLIDK ENSTTRP00000001296/1-731 TNCKEYNPPE SEYYKCANIL EKFFFSKIKE AGLIDK bmy_13199T0/1-666 TNCKEYNPPE SEYYKCANIL EKFFFSKIKE AGLIDK BACU009989/1-675 TNCKEYNPPE SEYYKCANIL EKFFFSKIKE AGLIDK