KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:57 2014 Check: 00 .. Name: ENSP00000407353/1-409 Len: 513 Check: 9574 Weight: 1.00 Name: ENSBTAP00000000995/1-399 Len: 513 Check: 1490 Weight: 1.00 Name: ENSTTRP00000011957/1-383 Len: 513 Check: 6823 Weight: 1.00 Name: BACU016355/1-316 Len: 513 Check: 2722 Weight: 1.00 Name: bmy_19072T0/1-216 Len: 513 Check: 4067 Weight: 1.00 // 1 50 ENSP00000407353/1-409 MKDTQDIQEA SKAMQNKVHE QEDKNEKQKQ REDKLGVYSL VHFSPKMLGS ENSBTAP00000000995/1-399 ---------- ---------M ETQAQIEDSQ DDVPKKLPSL VHFFPTSTDS ENSTTRP00000011957/1-383 ---------- ---------- ---VLGSINK IEDTSERHSV VHFFPTSTDS BACU016355/1-316 ---------- ---------- ---------- ---------- ---------- bmy_19072T0/1-216 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000407353/1-409 VATTLPLSSS NSSGMPLGYY LSSPQISRVT ISTTGQLTSK ATVGSCSRVE ENSBTAP00000000995/1-399 DSTTLACSRS FSDEIPLSYC LSSPQVSGAT ISTIGPKPLK PALVTHSHSE ENSTTRP00000011957/1-383 DTTTLPCSWS LSNEIPLSYY LSSPQVSGVT FSTIGPKPLK PALVSHSQSE BACU016355/1-316 ---------- ---------M LTTEK----- ---------- ---------- bmy_19072T0/1-216 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000407353/1-409 NSLDASPFSV PKKQD----- -ESPMIGDGE DYFLSLFGDS KKLTAHSNYT ENSBTAP00000000995/1-399 NSLGLNVVKI PKKHSIPVLA GEPAVIGEGE DYFLSLFGDK RKVVQSFH-- ENSTTRP00000011957/1-383 DSLGLNNFKI PKKHT----- -KLAVVGEGE DYFLSLFGDS KKLVTHSFPT BACU016355/1-316 ---------- ---------- ---------- ---------- ---------- bmy_19072T0/1-216 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000407353/1-409 QKTLKYFSMI LEEVGQFTSS SLGDVEIAEV NVKGLFVKLI NSSLDKEMAI ENSBTAP00000000995/1-399 EKSWKHFSMI LEEVGQSRSS AVGDIKIAEV NVKGLFVKLI NSSPDKELEI ENSTTRP00000011957/1-383 KKTWKHFSMI LEEVGQSRSS ALGDIKIAEV NVKGLCVKLI NSSLDKELEI BACU016355/1-316 TETWLYHPR- ---------- ---------- DSTGPCC--L SEFSETQL-- bmy_19072T0/1-216 ---------- ---------- ALGDIKIAEV NVKGLCVKLI NSSVDKELEI 201 250 ENSP00000407353/1-409 GDHILQQNVN GQTISLYRFL PNIVMQANST VTV-WAAASE AKHQPPSDFL ENSBTAP00000000995/1-399 GNHTLQQNVG GQTISLYRFL PGIIMQANST VTV-WTAASE VKHQSPSDFL ENSTTRP00000011957/1-383 GNHILQQNVD GQTVSLYQFL PNIKMQANST VTV-WAAASE AKHQPPSDFL BACU016355/1-316 ----LSEETN NST-----FM RRAVVGAQEE TTEGWDQGSG LEKRKETSFP bmy_19072T0/1-216 GNHILQQNVD GQTVSLYQFL PNIIMQANST VTQ-HLKQST SHHQI---FF 251 300 ENSP00000407353/1-409 WKEQDKFRAS PDCITILCKP NGQAIAWYTP IHWKQAWEKL DADVEFNRCS ENSBTAP00000000995/1-399 WKEQNRFQTG PNCTTILCKP NGEAVAWYTP IHWKQAWEKL ETDIEFDRCS ENSTTRP00000011957/1-383 WKEQNRFRTS PNCTTILCKP NGEAVAWYTP IHWKQAWEKL ETDIECDRCS BACU016355/1-316 ----AKMKDT QATQEI---- ---SAVLQSE VHEQE--DKM ENQAQIEDTR bmy_19072T0/1-216 ----GRNKTD LGQAQI---- ---AVAWYTP IHWKQAWEKL ETDIECERCS 301 350 ENSP00000407353/1-409 VVSPTFRKRV FQWTASTATI TKEKQDQPKK DISNY----- -----QVEQA ENSBTAP00000000995/1-399 IISATPQRHM FHWPAVVTT- SKEKQDQCKR DSSKC----- -----QVEQV ENSTTRP00000011957/1-383 LVSPTSRRHM FHWPAATTT- TKEKQDQSKQ DISKY----- -----QVERV BACU016355/1-316 DDIPKTQRSL VHFFPTSTD- SDTTTLPCSQ SLSNETPLSY YLSSPQVSGV bmy_19072T0/1-216 VVSPTSQRHM FHWPAATTT- TKEKQDQSKK DISKY----- -----QVEQV 351 400 ENSP00000407353/1-409 QVLLKREKEI PPTV------ ---------- ---------- ---------- ENSBTAP00000000995/1-399 QAFLKREKEI PPTL------ ---------- ---------- ---------- ENSTTRP00000011957/1-383 QASLTXXXXX XXXX------ ---------- ---------- ---------- BACU016355/1-316 TLSTIGPKPL KPALVNHSQS EDSLGLNNFK IPKKHTMPVL ASQPAVIGEG bmy_19072T0/1-216 QASLTREKEI PPTL------ ---------- ---------- ---------- 401 450 ENSP00000407353/1-409 ---------- -------FPN RSPWCQNP-- ---------- --------YV ENSBTAP00000000995/1-399 ---------- -------FPT RSPWCRSP-- ---------- --------NV ENSTTRP00000011957/1-383 ---------- -------XXX XXXXXXXX-- ---------- --------XX BACU016355/1-316 EDYFLSLFGD SKKLVHSFHT KKTWKHFSMI LEEVGQSRSS ALGDIKIAEV bmy_19072T0/1-216 ---------- -------FPN RSPWCHSP-- ---------- --------NV 451 500 ENSP00000407353/1-409 SAHPYC-PLI EPH------- NTSTAGGRLD RQPRTRSTRP NRASGSKKKK ENSBTAP00000000995/1-399 PAHPYC-ALT KAY------- NTSVTEHSLN RQLRSTRTDP VQVGQRKSTN ENSTTRP00000011957/1-383 XXXXXX-XXX XXX------- XXXMTERSLD SQPRSQSA-- ADLAESRKNR BACU016355/1-316 NVKGLCVKLI NSSLDKELEI GNHILQQNVD GQTVSLYQFL PNIIMQANST bmy_19072T0/1-216 SAHPYC-PLI DPH------- NTYMTERSLD RQPRSQSAKP DPA------- 501 550 ENSP00000407353/1-409 TSESQKQ--- --- ENSBTAP00000000995/1-399 LLNLEKKKTK SWR ENSTTRP00000011957/1-383 TSELQKQ--- --- BACU016355/1-316 VTDNNIQV-- --- bmy_19072T0/1-216 ---------- ---