KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:12:58 2014 Check: 00 .. Name: ENSTTRP00000000339/1-465 Len: 480 Check: 2407 Weight: 1.00 Name: ENSP00000358223/1-465 Len: 480 Check: 4510 Weight: 1.00 Name: ENSBTAP00000001012/1-480 Len: 480 Check: 6684 Weight: 1.00 Name: bmy_08181T0/1-429 Len: 480 Check: 6222 Weight: 1.00 // 1 50 ENSTTRP00000000339/1-465 ---------- -----MLLIW TLSLLLGAVV GKEICYERLG CFSDDSPWAG ENSP00000358223/1-465 ---------- -----MLPLW TLSLLLGAVA GKEVCYERLG CFSDDSPWSG ENSBTAP00000001012/1-480 IPMDYQNINS FPQRNMLLIW TLSLLLGAVV GKEVCYDRLG CFSDDSPWAG bmy_08181T0/1-429 ---------- ---------- ---------- -KEICYQRLG CFSDDSPWAG 51 100 ENSTTRP00000000339/1-465 IVERPLKILP WSPKDVNTRF LLYTNENPDN FQKLVADPST ITDSNFKTNR ENSP00000358223/1-465 ITERPLHILP WSPKDVNTRF LLYTNENPNN FQEVAADSSS ISGSNFKTNR ENSBTAP00000001012/1-480 IIERPLKVLP WSPEEVNTRF LLYTNENPNN FQEIVADEST IASSNFKTNR bmy_08181T0/1-429 IVERPIKILP WPPKDVNTRF LLYTNENPDS FQELVADPST ITDSNFKTNR 101 150 ENSTTRP00000000339/1-465 KTVFIIHGFI DKGEESWLHN ICKNLFKVES VNCICVDWKS GSRTGYTQAS ENSP00000358223/1-465 KTRFIIHGFI DKGEENWLAN VCKNLFKVES VNCICVDWKG GSRTGYTQAS ENSBTAP00000001012/1-480 KTRFVIHGFI DKGDENWLQS ICKNLFSVES VNCICVDWKG GSHTGYTQAT bmy_08181T0/1-429 KTRFIIHGFI DKGEENWLHS ICKNLFNVES VNCICVDWKG GSRTGYTQAS 151 200 ENSTTRP00000000339/1-465 QNIRIVGAEV AYFVDVLESS FEYSPSKVHV IGHSLGAHAA GESGRRTNGT ENSP00000358223/1-465 QNIRIVGAEV AYFVEFLQSA FGYSPSNVHV IGHSLGAHAA GEAGRRTNGT ENSBTAP00000001012/1-480 QNIRIVGAEV AYLVDVLKSS FEYSLSDVHI IGHSLGAHAA GEAGRRTSGA bmy_08181T0/1-429 QNIRIVGAEV AYFIDVLESS FGYSPSKVHV IGHSLGAHAA GESGRRTNGT 201 250 ENSTTRP00000000339/1-465 IGRITGLDPA EPCFEGTPEL VRLDPSDAQF VDVIHTDAAP IIPNLGFGMS ENSP00000358223/1-465 IGRITGLDPA EPCFQGTPEL VRLDPSDAKF VDVIHTDGAP IVPNLGFGMS ENSBTAP00000001012/1-480 IGRITGLDPA EPCFEGTPEL VRLDPSDAQF VDVIHTDAAP MIPNLGFGMS bmy_08181T0/1-429 IGRITGLDPA EPCFEGTPEL VRLDPSDAQF VDVIHTDAAP IIPNLGLGMS 251 300 ENSTTRP00000000339/1-465 QVVGHLDFFP NGGKEMPGCK KNALSQIVDI DGIWEGTRNF AACNHLRSYK ENSP00000358223/1-465 QVVGHLDFFP NGGVEMPGCK KNILSQIVDI DGIWEGTRDF AACNHLRSYK ENSBTAP00000001012/1-480 QVVGHLDFFP NGGKEMPGCK KNALSQIVDI DGIWEGTRDF VACNHLRSYK bmy_08181T0/1-429 QIVGHLDFFP NGGKEMPGCK KNALSQIVDI DGLWEGTRNF VACNHLRSYK 301 350 ENSTTRP00000000339/1-465 YYADSILNPD GFAGFPCASY SVFSANKCFP CPSEGCPQMG HYADRFPGKT ENSP00000358223/1-465 YYTDSIVNPD GFAGFPCASY NVFTANKCFP CPSGGCPQMG HYADRYPGKT ENSBTAP00000001012/1-480 YYADSILNPD GFAGFPCASY SAFSENKCFP CPSEGCPQMG HYADRFPGKT bmy_08181T0/1-429 YYADSILNPD GFAGFPCASY KVFSANKCFP CPSEGCPQMG HYADRFPGKT 351 400 ENSTTRP00000000339/1-465 KEVGQIFYLN TGDASNFARW RYKVAVTLSG KKVRGHILVS LFGDRGNSKQ ENSP00000358223/1-465 NDVGQKFYLD TGDASNFARW RYKVSVTLSG KKVTGHILVS LFGNKGNSKQ ENSBTAP00000001012/1-480 KSEGQTFYLN TGDAGNFARW RYKVDVTLSG KRVTGHILVS LFGDKGNSKQ bmy_08181T0/1-429 KAEGQVFYLN TGDASNFARW RYKVAVTLSG RKVRGHILVS LFGDRGNSKQ 401 450 ENSTTRP00000000339/1-465 YEIFKGILQP DSIHSNEFDS XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358223/1-465 YEIFKGTLKP DSTHSNEFDS DVDVGDLQMV KFIWYNNVIN PTLPRVGASK ENSBTAP00000001012/1-480 YEIFNGTLKP DSTESNEFDS DVEVGVLQKV KFLWYNNVIN PTLPKVGASK bmy_08181T0/1-429 YEIFKGSLQP AHTHSNEFDS DMDVGNMQKV KFIWYNNVIN PTLPRVGASK 451 500 ENSTTRP00000000339/1-465 XXXXXXXXXX FNFCSQETVR EDILLTLTLC ENSP00000358223/1-465 IIVETNVGKQ FNFCSPETVR EEVLLTLTPC ENSBTAP00000001012/1-480 ISVEANDGQV FDFCSQDTVR EEVLLTLNPC bmy_08181T0/1-429 IRVERNDGKV ---------- ----------