KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:59 2014 Check: 00 .. Name: ENSTTRP00000005215/1-585 Len: 642 Check: 1294 Weight: 1.00 Name: ENSP00000298198/1-622 Len: 642 Check: 8918 Weight: 1.00 Name: ENSBTAP00000001019/1-622 Len: 642 Check: 9595 Weight: 1.00 Name: bmy_01329T0/1-552 Len: 642 Check: 9041 Weight: 1.00 Name: BACU004983/1-528 Len: 642 Check: 3977 Weight: 1.00 // 1 50 ENSTTRP00000005215/1-585 ---------- ---------- ---------- -------NPK TKEQIENLLR ENSP00000298198/1-622 MAENTEGDLN SNLLHAPYHT GDPQLDTAIG QWLRWDKNPK TKEQIENLLR ENSBTAP00000001019/1-622 MTENAEGDLN SNLLHAPYHT GDPQLDTAIG QWLRWDKNPK TKEQIENLLR bmy_01329T0/1-552 ---------- ---------- ---------- ---------- ---------- BACU004983/1-528 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000005215/1-585 NGMNKELRDR LCCRMTFGTA GLRSAMGAGF CYINDLTVIQ STQGMYKYLE ENSP00000298198/1-622 NGMNKELRDR LCCRMTFGTA GLRSAMGAGF CYINDLTVIQ STQGMYKYLE ENSBTAP00000001019/1-622 NGMNKELRDR LCCRMTFGTA GLRSAMGAGF CYINDLTVIQ STQGMYKYLE bmy_01329T0/1-552 --MNKELRDR LCCRMTFGTA GLRSAMGAGF CYINDLTVIQ STQGMYKYLE BACU004983/1-528 ---------- ---------- ---------- ---------- ----MYKYLE 101 150 ENSTTRP00000005215/1-585 RCFSNFKQRG FVVGYDTRGQ VTSSCSSQRL AKLTAAVLLA KDVPVYLFSR ENSP00000298198/1-622 RCFSDFKQRG FVVGYDTRGQ VTSSCSSQRL AKLTAAVLLA KDVPVYLFSR ENSBTAP00000001019/1-622 RCFSDFKQRG FVVGYDTRGQ VTSSCSSQRL AKLTAAVLLA KDVPVYLFSR bmy_01329T0/1-552 RCFSDFKQRG FVVGYDTRGQ VTSSCSSQRL AKLTAAVLLA KDVPVYLFSR BACU004983/1-528 RCFSDFKQRG FVVGYDTRGQ VTSSCSSQRL AKLTAAVLLA KDVPVYLFSR 151 200 ENSTTRP00000005215/1-585 YVPTPFVPYA VQELKAVAGV MITASHNRKE DNGYKVYWEN GAQITSPHDK ENSP00000298198/1-622 YVPTPFVPYA VQKLKAVAGV MITASHNRKE DNGYKVYWET GAQITSPHDK ENSBTAP00000001019/1-622 YVPTPFVPYA VQELKAVAGV MITASHNRKE DNGYKVYWEN GAQITSPHDK bmy_01329T0/1-552 YVPTPFVPYA VQELKAVAGV MITASHNRKE DNGYKVYWEN GAQITSPHDK BACU004983/1-528 YVPTPFVPYA VQELKAVAGV MITASHNRKE DNGYKVYWEN GAQITSPHDK 201 250 ENSTTRP00000005215/1-585 EILKCIEECV EPWNGSWNDN LVDTSPLKRD PLQDICRRYM EDLKKICFYR ENSP00000298198/1-622 EILKCIEECV EPWNGSWNDN LVDTSPLKRD PLQDICRRYM EDLKKICFYR ENSBTAP00000001019/1-622 EILKCIEECV EPWNGSWNDN LVDTSPLKRD PLQDICRRYM DDLKKICFYR bmy_01329T0/1-552 EILKCIEECV EPWNGSWNDN LVDTSPLKRD PLQDICRRYM EDLKKICFHR BACU004983/1-528 EILKCIEECV EPWNGSWNDN LVDTSPLKRD PLQDICRRYM EDLKNICFHR 251 300 ENSTTRP00000005215/1-585 ELNSKTTLKF VHTSFHGVGH DYVQLAFQVF GFKPPIPVPE QKDPDPDFST ENSP00000298198/1-622 ELNSKTTLKF VHTSFHGVGH DYVQLAFKVF GFKPPIPVPE QKDPDPDFST ENSBTAP00000001019/1-622 ELNSKTTLKF VHTSFHGVGH DYVQLAFQVF GFKPPIPVPE QKDPDPDFST bmy_01329T0/1-552 ELNSKTTLKF VHTSFHGVGH DYVQLAFQVF GFKPPIPVPE QKDPDPDFST BACU004983/1-528 ELNSKTTLKF VHTSFHGVGH DYVQLAFQVF GFKPPIPVPE QKDPDPDFST 301 350 ENSTTRP00000005215/1-585 VKCPNPEEGE SVL------- ---------- ---XXXXXXX XXXXXXXXXX ENSP00000298198/1-622 VKCPNPEEGE SVL------- ---------- ---ELSLRLA EKENARVVLA ENSBTAP00000001019/1-622 VKCPNPEEGE SVL------- ---------- ---ELSLRLA EKENARIVLA bmy_01329T0/1-552 VKCPNPEEGE SVLEYYIEFN IFNAIQLFGS PFQELSLRLA EKENARIVLA BACU004983/1-528 VKCPNPEEGE SVL------- ---------- ---ELSLRLA EKENARIVLA 351 400 ENSTTRP00000005215/1-585 XXXXXXXXXX XXXXXXGDWK VFTGNELAAL FGWWMFDCWK KNKSRNTDVK ENSP00000298198/1-622 TDPDADRLAA AELQENGCWK VFTGNELAAL FGWWMFDCWK KNKSRNADVK ENSBTAP00000001019/1-622 TDPDADRLAV AELQENGVWK VFTGNELAAL FGWWMFDCWK KSKSRNADVN bmy_01329T0/1-552 TDPDADRLAV AELQENGDWK VFTGNELAAL FGWWMFDCWK KNKSRNADVK BACU004983/1-528 TDPDADRLAV AELQENGDWK VFTGNELAAL FGWWMFDCWK KNKSRNADVK 401 450 ENSTTRP00000005215/1-585 NIYMLATTVS SKILKAIALK EGFHFEETLP GFKWIGSRIK DLLENGKEVL ENSP00000298198/1-622 NVYMLATTVS SKILKAIALK EGFHFEETLP GFKWIGSRII DLLENGKEVL ENSBTAP00000001019/1-622 NIYMLATTVS SKILKAIALK EGFHFEETLP GFKWIGSRIK DLLENGKEVL bmy_01329T0/1-552 NIYMLATTVS SKILKAIALK EGFHFEETLP GFKWIGSRIK DLLENGKEVL BACU004983/1-528 NIYMLATTVS SKILKAIALK EGFHFEETLP GFKWIGSRIK DLLENRKEVL 451 500 ENSTTRP00000005215/1-585 FAFEESIGFL CGTSVLDKDG VSAAVVVAEM ASYLETMNIT LKQQLIKVYE ENSP00000298198/1-622 FAFEESIGFL CGTSVLDKDG VSAAVVVAEM ASYLETMNIT LKQQLVKVYE ENSBTAP00000001019/1-622 FSFEESIGFL CGTSVLDKDG VSAAVVVAEM ASYLETMNIT LKQQLINVYE bmy_01329T0/1-552 FAFEESIGFL CGTSVLDKDG VSAAVVVAEM ASYLETMNIT LKQQLINVYE BACU004983/1-528 FAFEESIGFL CGTSVLDKDG VSAAVVVAEM ASYLETMNIT LKQQLINVYE 501 550 ENSTTRP00000005215/1-585 KYGYHISKTS YFLCYDPTTI KSIFERLRNF DSPKEYPKFC GTFAILHIRD ENSP00000298198/1-622 KYGYHISKTS YFLCYEPPTI KSIFERLRNF DSPKEYPKFC GTFAILHVRD ENSBTAP00000001019/1-622 KYGYHISKTS YFLCYDPTTI KSIFERLRNF DSPKEYPKFC GAFAILHVRD bmy_01329T0/1-552 KYGYHISKTS YFLCYDPTTI KSIFERLRNF DSPKEHPKFC GTFAILHIRD BACU004983/1-528 KYGYHISKTS YFLCYDPTTI KSIFERLRNF DSPKEYPKFC GTFAILHIRD 551 600 ENSTTRP00000005215/1-585 VTTGYDSSQP NKKSVLPVSK NSQMITFSFQ NGCVATLRTS GTEPKIKYYA ENSP00000298198/1-622 VTTGYDSSQP NKKSVLPVSK NSQMITFTFQ NGCVATLRTS GTEPKIKYYA ENSBTAP00000001019/1-622 ITTGYDSSQP NKKSVLPVSK SSQMITFTFQ NGCVATLRTS GTEPKIKYYA bmy_01329T0/1-552 VTTGYDSSQP NKKSLF---- ---------- ---------- ---------- BACU004983/1-528 VTTGYDSSQP NKKSVLPVSK NSQMITFTFQ NGCVATLRTS GTEPKIKYYA 601 650 ENSTTRP00000005215/1-585 EMCASPDQSD TALLEEELKK LIEALIENFL EPRKNGLTWR SV ENSP00000298198/1-622 EMCASPDQSD TALLEEELKK LIDALIENFL QPSKNGLIWR SV ENSBTAP00000001019/1-622 EMCASPDQSD TALLEEELKK LIDALIENFL EPSKNGLTWR SV bmy_01329T0/1-552 ----NHPISD TALLEEELKK LIEALIENFL EPSKNGLTWR SV BACU004983/1-528 EMCASPDQSD TALLEEELKK LIEALIENFL EPSKNGLTWR SV