KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:59 2014 Check: 00 .. Name: ENSBTAP00000001037/1-163 Len: 243 Check: 5679 Weight: 1.00 Name: ENSP00000295400/1-160 Len: 243 Check: 4031 Weight: 1.00 Name: bmy_21153T0/1-102 Len: 243 Check: 6567 Weight: 1.00 Name: BACU006034/1-151 Len: 243 Check: 4531 Weight: 1.00 Name: ENSTTRP00000006536/1-224 Len: 243 Check: 8285 Weight: 1.00 // 1 50 ENSBTAP00000001037/1-163 ---------- -------TRN PSHP------ ---------- ---------- ENSP00000295400/1-160 ---------- ---------M VPSA------ ---------- ---------- bmy_21153T0/1-102 ---------- ---------M SLLP------ ---------- ---------- BACU006034/1-151 ---------- --------MS FLSP------ ---------- ---------- ENSTTRP00000006536/1-224 PSSRFRPAAG AAGRVPAERA VLPPPARAGG WPCLAGAFFP RTAAPLRHLG 51 100 ENSBTAP00000001037/1-163 ---------- ---------- -GSFSTGVGT CGMSCCALNL SRMSSLSPAD ENSP00000295400/1-160 ---------- ---------- -GQLALFALG IVLAACQALE NSTSPLS-AD bmy_21153T0/1-102 ---------- ---------- -GEH------ ---------- --------AD BACU006034/1-151 ---------- ---------- ---------- ---------- --------AD ENSTTRP00000006536/1-224 TSGRAGGWSA CRPARKMVTS AGQLALFVLG LLLAVCQALA NSTSALS-AD 101 150 ENSBTAP00000001037/1-163 PPVAAAVVSH FNDCPDSHSQ FCFHGTCRFL VQEEKPACVC HSGYVGARCE ENSP00000295400/1-160 PPVAAAVVSH FNDCPDSHTQ FCFHGTCRFL VQEDKPACVC HSGYVGARCE bmy_21153T0/1-102 VPV------- ---------- --------FL --------SC HSGYVGARCE BACU006034/1-151 PPVAAAVVSH FNDCPASHSQ FCFHGTCRFL VQEDKPACVC HSGYVGARCE ENSTTRP00000006536/1-224 PPVAAAVVSH FNDCPASHSQ FCFHGTCRFL VQEDKPACVC HSGYVGARCE 151 200 ENSBTAP00000001037/1-163 HADLLAVVAA SQKKQAITAL VVVSIVALAV LIITCVLIHC CEVRKHCEWC ENSP00000295400/1-160 HADLLAVVAA SQKKQAITAL VVVSIVALAV LIITCVLIHC CQVRKHCEWC bmy_21153T0/1-102 HADLLAVVAA SQKKQAITAL VVVSIVALTV LIITCVLIHC CQVRKHCEWC BACU006034/1-151 HADLLAVVAA SQKKQAITAL VVVSIVALTV LIITCVLIHC CQVRKHCEWC ENSTTRP00000006536/1-224 HADLLAVVAA SQKKQAITAL VVVSIVALTV LIITCVLIHC CQVRKHCEWC 201 250 ENSBTAP00000001037/1-163 RALICRHEKP SALLKGRTAC CHSETGK--- ---------- --- ENSP00000295400/1-160 RALICRHEKP SALLKGRTAC CHSETVV--- ---------- --- bmy_21153T0/1-102 RALICRHEKP SALLKGRTAC CHSET----- ---------- --- BACU006034/1-151 RALICRHEKP SALLKGRTAC CHSETGKRDA SRRGLFPSGD TIG ENSTTRP00000006536/1-224 RALICRHEKP SALLKGRTAC CHSET----- ---------- ---