KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:06 2014 Check: 00 .. Name: BACU019756/1-257 Len: 403 Check: 209 Weight: 1.00 Name: ENSBTAP00000001053/1-257 Len: 403 Check: 8783 Weight: 1.00 Name: bmy_03666T0/1-390 Len: 403 Check: 7775 Weight: 1.00 Name: ENSTTRP00000010207/1-251 Len: 403 Check: 6745 Weight: 1.00 // 1 50 BACU019756/1-257 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001053/1-257 ---------- ---------- ---------- ---------- ---------- bmy_03666T0/1-390 MAWQMTQLLL LALVAAAWGA QPRTPQARTD LLNVCMNAKH HKTKPGPEDK ENSTTRP00000010207/1-251 ---------- ---------- ---------- ---------- ---------- 51 100 BACU019756/1-257 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001053/1-257 ---------- ---------- ---------- ---------- ---------- bmy_03666T0/1-390 LHDQCSPWKK NACCSVNTSQ EAHKDISYLY RFNWDHCGKM EPACKRHFIQ ENSTTRP00000010207/1-251 ---------- ---------- ---------- ---------- ---------- 101 150 BACU019756/1-257 ---------- ---------- ---------- ---------M AWRMTQLLLL ENSBTAP00000001053/1-257 ---------- ---------- ---------- ---------M AWKITPLLCL bmy_03666T0/1-390 DTCLYECSPN LGPWIQEVNQ SWRKERVLNV PLCKEDWTSM AWKTTWLLFL ENSTTRP00000010207/1-251 ---------- ---------- ---------- ---------M AWKTTWLLFL 151 200 BACU019756/1-257 AL-VAAAWGA PSGTPQARTD LLNVCMNAKH HKTKPGPEDE LHDQCSPWKK ENSBTAP00000001053/1-257 LVCVAAVG-- ---AARPGTQ LLNVCMNARY HKEKPGPEDK LHGQCSPWKK bmy_03666T0/1-390 VVGAAAVW-- ---TARPRTE LLNVCMNAKH HKEKPGPEDK LHEQCSPWKK ENSTTRP00000010207/1-251 LVGVAAVW-- ---TARPRTE LLNVCMNAKH HKEKPGPEDK LHEQCSPWKK 201 250 BACU019756/1-257 KACCSVNTSR EAHKDISYLY RFNWDHCGKM EPACKRHFIQ DTCLYECSPN ENSBTAP00000001053/1-257 NACCFVNTSI EAHKDISSLY RFDWDHCGKM EPACKRHFIQ DTCLYECSPN bmy_03666T0/1-390 NACCSVNTSR EAHKDISYLY RFNWDHCGKM EPACKRHFIQ DTCLYECSPN ENSTTRP00000010207/1-251 NACCSVNTSQ EAHKDISYLY RFNWDHCGKM KPACKHHFIQ DTCLYECSPN 251 300 BACU019756/1-257 LGPWIQEVNQ SWRKERVLNV PLCKEDCQIW WEDCRTSYTC KTNWHKGWNW ENSBTAP00000001053/1-257 LGPWIREVNQ SWRKERILNV PLCKEDCQSW WEDCRTSYTC KSNWHRGWDW bmy_03666T0/1-390 LGPWIQEVNQ SWRKERVLNV PLCKEDCQIW WEDCRTSYTC KTNWHKGWNW ENSTTRP00000010207/1-251 LGPWIQEVNQ SWRKERFLNV PLCKEDCQIW WEDCRTSYTC KTNWHKGWNW 301 350 BACU019756/1-257 TSGYNQCPVR AACHRFDFYF PTPAALCNEI WSHSFKVSNY GRGSGRCIQM ENSBTAP00000001053/1-257 TSGYNQCPVK AACHRFDFYF PTPAALCNEI WSHSYKASNY SRGSGRCIQM bmy_03666T0/1-390 TSGYNQCPVR AACHRFDFYF PTPAALCNEI WSHSYKVSNY GRGSGRCIQM ENSTTRP00000010207/1-251 TSGYNQCPVR AACHRFDFYF PTPAALCNEI WSHSYKVSNY GRGSGRCIQM 351 400 BACU019756/1-257 WFDPAQGNPN EGVAKFYAET TNSGAMPQGI GPLLLNLTQI LQRWFLG--- ENSBTAP00000001053/1-257 WFDPILDNPN EEVARFYAES MNGAGLHEAW -PLRCGLLLL LL-WLLSQIT bmy_03666T0/1-390 WFDPAQGNPN EEVARLYAET MSGAGLREAW -PLRFGLVLM LL-WLLN--- ENSTTRP00000010207/1-251 WFDPAQGNPN EEVARFYAET MSGAGLHEAW -PLRFGLVLM LL-WLLN--- 401 450 BACU019756/1-257 --- ENSBTAP00000001053/1-257 LSF bmy_03666T0/1-390 --- ENSTTRP00000010207/1-251 ---