KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:13:06 2014  Check: 00 ..

 Name: ENSP00000307958/1-205     Len:    209  Check:  3814  Weight:  1.00
 Name: ENSBTAP00000001065/1-209  Len:    209  Check:  5108  Weight:  1.00
 Name: bmy_11540T0/1-169         Len:    209  Check:  2081  Weight:  1.00
 Name: ENSTTRP00000001356/1-201  Len:    209  Check:  2582  Weight:  1.00

//


                          1                                                   50
ENSP00000307958/1-205     MEEKQPQKTK EPSKEDEPQQ KEMPTHLSLG AES----KAE AKTPVLVETQ 
ENSBTAP00000001065/1-209  METDQPKTVD ENTENKPQEN KGLVENSLPS EPSPTLEKAE AQQENKAATK 
bmy_11540T0/1-169         ---------- ---------- ---------- ---------- AKQENIAATK 
ENSTTRP00000001356/1-201  MEKDQPKTIN EHTKNEPQQN E-------LP APLSNLEKAE AKQENIAATK 


                          51                                                 100
ENSP00000307958/1-205     TVDNANEKSE KPPENQKKLS DKDTVATKIQ AWWRGTLVRR ALLHAALSAC 
ENSBTAP00000001065/1-209  GADDADKRSG VVTKPQKKPP VSDPEAVKIQ AWWRGTLVRR TLLHAALRVW 
bmy_11540T0/1-169         GVDDANKRPR AIPRTPNRPP ISNPEVVKIQ AWWRGTLVRS TLLYVALRVW 
ENSTTRP00000001356/1-201  GVDDANKRLR AIPRTQNRPP ISNPEVVKIQ AWWRGTLVCS TLLHVALRVW 


                          101                                                150
ENSP00000307958/1-205     IIQCWWRLIL SKILKKRRQA ALEAFSRKEW AAVTLQSQAR MWRIRRRYCQ 
ENSBTAP00000001065/1-209  IIQAWWRVKL ARLQDSRRRA ALENFTRKEW AAVRLQSWVR MWRIRRRYCR 
bmy_11540T0/1-169         IIQGWWRHKL VKLHENRRRT ALENFTQKEW AAVRLQSWVR MWRIRWRYCR 
ENSTTRP00000001356/1-201  IIQGWWRHKL VKLHENRQRT ALENFTRKEW VAVRLQSWVR MWRICWRYCH 


                          151                                                200
ENSP00000307958/1-205     VLNAVRIIQA YWRCRSCASR GFIKGQYRVT ANQLHLQLEI LLDSGPCIVT 
ENSBTAP00000001065/1-209  LLDAARIIQA YWRCHSCTSR GFIKGYYRVT ANQLHLELEI LLGSGPCIVT 
bmy_11540T0/1-169         LLNAARIIQA YWRCQSCASQ GFTKGHYRVT ANQLHLELEV LLGSGPCIVT 
ENSTTRP00000001356/1-201  LLNAACIIQA CWRCHSCASQ GFIKGH-RVT ANQLHLELEI LLGSGPCIVT 


                          201                                                250
ENSP00000307958/1-205     ECIPFSIKE 
ENSBTAP00000001065/1-209  ECIPLPIKQ 
bmy_11540T0/1-169         ECIPLPIKQ 
ENSTTRP00000001356/1-201  ECIPLPIKQ