KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:13:06 2014 Check: 00 ..
Name: ENSP00000307958/1-205 Len: 209 Check: 3814 Weight: 1.00
Name: ENSBTAP00000001065/1-209 Len: 209 Check: 5108 Weight: 1.00
Name: bmy_11540T0/1-169 Len: 209 Check: 2081 Weight: 1.00
Name: ENSTTRP00000001356/1-201 Len: 209 Check: 2582 Weight: 1.00
//
1 50
ENSP00000307958/1-205 MEEKQPQKTK EPSKEDEPQQ KEMPTHLSLG AES----KAE AKTPVLVETQ
ENSBTAP00000001065/1-209 METDQPKTVD ENTENKPQEN KGLVENSLPS EPSPTLEKAE AQQENKAATK
bmy_11540T0/1-169 ---------- ---------- ---------- ---------- AKQENIAATK
ENSTTRP00000001356/1-201 MEKDQPKTIN EHTKNEPQQN E-------LP APLSNLEKAE AKQENIAATK
51 100
ENSP00000307958/1-205 TVDNANEKSE KPPENQKKLS DKDTVATKIQ AWWRGTLVRR ALLHAALSAC
ENSBTAP00000001065/1-209 GADDADKRSG VVTKPQKKPP VSDPEAVKIQ AWWRGTLVRR TLLHAALRVW
bmy_11540T0/1-169 GVDDANKRPR AIPRTPNRPP ISNPEVVKIQ AWWRGTLVRS TLLYVALRVW
ENSTTRP00000001356/1-201 GVDDANKRLR AIPRTQNRPP ISNPEVVKIQ AWWRGTLVCS TLLHVALRVW
101 150
ENSP00000307958/1-205 IIQCWWRLIL SKILKKRRQA ALEAFSRKEW AAVTLQSQAR MWRIRRRYCQ
ENSBTAP00000001065/1-209 IIQAWWRVKL ARLQDSRRRA ALENFTRKEW AAVRLQSWVR MWRIRRRYCR
bmy_11540T0/1-169 IIQGWWRHKL VKLHENRRRT ALENFTQKEW AAVRLQSWVR MWRIRWRYCR
ENSTTRP00000001356/1-201 IIQGWWRHKL VKLHENRQRT ALENFTRKEW VAVRLQSWVR MWRICWRYCH
151 200
ENSP00000307958/1-205 VLNAVRIIQA YWRCRSCASR GFIKGQYRVT ANQLHLQLEI LLDSGPCIVT
ENSBTAP00000001065/1-209 LLDAARIIQA YWRCHSCTSR GFIKGYYRVT ANQLHLELEI LLGSGPCIVT
bmy_11540T0/1-169 LLNAARIIQA YWRCQSCASQ GFTKGHYRVT ANQLHLELEV LLGSGPCIVT
ENSTTRP00000001356/1-201 LLNAACIIQA CWRCHSCASQ GFIKGH-RVT ANQLHLELEI LLGSGPCIVT
201 250
ENSP00000307958/1-205 ECIPFSIKE
ENSBTAP00000001065/1-209 ECIPLPIKQ
bmy_11540T0/1-169 ECIPLPIKQ
ENSTTRP00000001356/1-201 ECIPLPIKQ