KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:07 2014 Check: 00 .. Name: ENSTTRP00000003613/1-361 Len: 612 Check: 1694 Weight: 1.00 Name: ENSP00000439937/1-361 Len: 612 Check: 1814 Weight: 1.00 Name: ENSBTAP00000001076/1-371 Len: 612 Check: 4719 Weight: 1.00 Name: bmy_02646T0/1-349 Len: 612 Check: 1155 Weight: 1.00 Name: BACU016640/1-610 Len: 612 Check: 359 Weight: 1.00 // 1 50 ENSTTRP00000003613/1-361 ---------- ---------- ---------- ---------- ---------- ENSP00000439937/1-361 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001076/1-371 ---------- ---------- ---------- ---------- ---------- bmy_02646T0/1-349 ---------- ---------- ---------- ---------- ---------- BACU016640/1-610 MLGTKGGEGF VVKVRGLPWS CSADEVQRFF SDCKIQNGAQ GIRFIYTREG 51 100 ENSTTRP00000003613/1-361 ---------- ---------- ---------- ---------- ---------- ENSP00000439937/1-361 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001076/1-371 ---------- ---------- ---------- ---------- ---------- bmy_02646T0/1-349 ---------- ---------- ---------- ---------- ---------- BACU016640/1-610 RPSGEAFVEL ESEDEVKLAL KKDRETMGHR YVEVFKSNNV EMDWVLKHTG 101 150 ENSTTRP00000003613/1-361 ---------- ---------- ---------- ---------- ---------- ENSP00000439937/1-361 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001076/1-371 ---------- ---------- ---------- -----VPGG- ---------- bmy_02646T0/1-349 ---------- ---------- ---------- ---------- ---------- BACU016640/1-610 PNSPDTANDG FVRLRGLLFG CSKEEIVQFF SGLEIVPNGI TLPVDFQGRS 151 200 ENSTTRP00000003613/1-361 ---------- ---------- ---------- --MSTAR--- ---------- ENSP00000439937/1-361 ---------- ---------- ---------- --MSTAR--- ---------- ENSBTAP00000001076/1-371 ---------- ---------- ---GCGWPPL STLSPHR--- ---------- bmy_02646T0/1-349 ---------- ---------- ---------- --MSTAR--- ---------- BACU016640/1-610 TGEAFMQFAS QEIAEKALKK HKERIGHRYI EIFKSSRAEV RTHYDPPRKL 201 250 ENSTTRP00000003613/1-361 ---------- ---------- ---------- ---------- ---------- ENSP00000439937/1-361 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001076/1-371 ---------- ---------- ---------- ---------- ---------- bmy_02646T0/1-349 ---------- ---------- ---------- ---------- ---------- BACU016640/1-610 TAMQRPGPYD RPGAGRGYNG FGRGAGFERM RCGAYGGGYG GYDDYNGYND 251 300 ENSTTRP00000003613/1-361 -----EQPIF STRAHVFQID PATKRNWIPA GKHALTVSYF YDATRNVYRI ENSP00000439937/1-361 -----EQPIF STRAHVFQID PATKRNWIPA GKHALTVSYF YDATRNVYRI ENSBTAP00000001076/1-371 -----EQPIF STRAHVFQID PATKRNWIPA GKHALTVSYF YDATRNVYRI bmy_02646T0/1-349 -----EQPIF STRAHVFQID PATKRNWIPA GKHALTVSYF YDATRN---- BACU016640/1-610 GYGFGEQPIF STRAHVFQID PATKRNWIPA GKHALTVSYF YDATRNVYRI 301 350 ENSTTRP00000003613/1-361 ISLGGAKAII NSTVTPNMTF TKTSQKFGQW ADSRANTVYG LGFASEQHLT ENSP00000439937/1-361 ISIGGAKAII NSTVTPNMTF TKTSQKFGQW ADSRANTVYG LGFASEQHLT ENSBTAP00000001076/1-371 ISLGGAKAII NSTVTPNMTF TKTSQKFGQW ADSRANTVYG LGFASEQHLT bmy_02646T0/1-349 -------AII NSTVTPNMTF TKTSQKFGQW ADSRANTVYG LGFASEQHLT BACU016640/1-610 ISLGGAKAII NSTVTPNMTF TKTSQKFGQW ADSRANTVYG LGFASEQHLT 351 400 ENSTTRP00000003613/1-361 QFAEKFQEVK EAARLAREKS QDGGELTSPA LGLTAHQXXX XXXXXXXXXX ENSP00000439937/1-361 QFAEKFQEVK EAARLAREKS QDGGELTSPA LGLASHQVPP SPLVSANGPG ENSBTAP00000001076/1-371 QFAEKFQEVK EAARLAREKS QDGGELTSPA LGLTAHQVPP SPLVSTNGPG bmy_02646T0/1-349 QFAEKFQEVK EAARLAREKS QDGGELTSPA LGLTAHQVPP SPLVSSNGPG BACU016640/1-610 QFAEKFQEVK EAARLAREKS QDGGELTSPA LGLTAHQVPP SPLVSSNGPG 401 450 ENSTTRP00000003613/1-361 XXXXXXXXXX XXXXXXXXXX XXXXXXXXSV GEVQWEAEFF ALQDSNNKLA ENSP00000439937/1-361 EEKLFRSQSA DAPGPTERER LKKMLSEGSV GEVQWEAEFF ALQDSNNKLA ENSBTAP00000001076/1-371 DEKLFRSQSA DAPGPAERER LKKMLSEGSV GEVQWEAEFF ALQDSNNKLA bmy_02646T0/1-349 DEKLFRSQSA DAPGPAERER LRKMLSEGSV GEVQWEAEFF ALQDSNNKLA BACU016640/1-610 DEKLFRSQSA DAPGPAERER LRKMLSEGSV GEVQWEAEFF ALQDSNNKLA 451 500 ENSTTRP00000003613/1-361 SALREANAAA AQWRQQLEAQ RAEAERLRQR VAELEAQAAT -AEPPAVSEK ENSP00000439937/1-361 GALREANAAA AQWRQQLEAQ RAEAERLRQR VAELEAQAAS EVTPTGEKEG ENSBTAP00000001076/1-371 GALREANAAA AQWRQQLEAQ RAEAERLRQR VAELEAQAA- -AEPASVSEK bmy_02646T0/1-349 SALREANAAA AQWRQQLEAQ RAEAERLRQR VAELEAQAAT -AEPPAVSEK BACU016640/1-610 SALREANAAA AQWRQQLEAQ RAEAERLRQR VAELEAQAAT -AEPPAVSEK 501 550 ENSTTRP00000003613/1-361 EGPGQSLEQL EALVQTKDQE IQTLKSQTGG PREAPDSAER EETQQKVQXX ENSP00000439937/1-361 LGQGQSLEQL EALVQTKDQE IQTLKSQTGG PREALEAAER EETQQKVQDL ENSBTAP00000001076/1-371 EGPSQSLEQL EALVETKDQE IQTLRSQTSG SREAADT-ER EETQQKVQDL bmy_02646T0/1-349 EGPGQSLEQL EALVQTKDQE IQTLKSQTGG PREAPDTAER EETQQKVQEL BACU016640/1-610 EGPGQSLEQL EALVQTKDQE IQTLKSQTGG PREAPETAER EETQQKVQEL 551 600 ENSTTRP00000003613/1-361 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXELR ENSP00000439937/1-361 ETRNAELEHQ LRAMERSLEE ARAERERARA EVGRAAQLLD VSLFELSELR ENSBTAP00000001076/1-371 ETRNAELEHQ LRATERSLEE ARVERERARA EVGRAAQLLD VRLFELSELR bmy_02646T0/1-349 ETRNAELEHQ LRATERSLEE ARVERERARA EVGRAAQLLD VRLFELSELR BACU016640/1-610 ETRNAELEHQ LRATERSLEE ARVERERARA EVGRAAQLLD VRLFELSELR 601 650 ENSTTRP00000003613/1-361 EGWSRLAESG LW ENSP00000439937/1-361 EGLARLAEAA P- ENSBTAP00000001076/1-371 EGLARLAEGA P- bmy_02646T0/1-349 EGLARLAEGA P- BACU016640/1-610 EGLARLAEGA P-