KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:10 2014 Check: 00 .. Name: ENSP00000344961/1-379 Len: 758 Check: 457 Weight: 1.00 Name: ENSBTAP00000001083/1-391 Len: 758 Check: 7499 Weight: 1.00 Name: ENSTTRP00000001344/1-378 Len: 758 Check: 8247 Weight: 1.00 Name: BACU000979/1-719 Len: 758 Check: 2708 Weight: 1.00 Name: bmy_03599T0/1-229 Len: 758 Check: 4000 Weight: 1.00 // 1 50 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 MQPPACRYSL EKDEDTPEEG RHLKAETEQP QCGRENSNSD GVPWKLPATG bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 PLSGVEKTEP SFPEVQPPDC GSSPRPPLES LSKKHCQNQG KLLHFDRQAP bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 --CTTHPNLR KQQE------ ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 GRASTSPTLR RLRGRSCGSV RGRAHGTAHA PPQQEALEGP ASGSCKESSG bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 SPHRLSNGLF GSPEESSHSL LPLRLHSRLP PDPETALNAA DSFELQMAPS bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 DEFALPVLQP LNEGSLPQAS LPRSGGQPAP SRAPRLPRPQ LELQRLSLFL bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 CSNCVGMGPI CSLHIHEVST LCQTLDTHTV DLRIFSGRQN KEKFWYQKGD bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000344961/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001083/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001344/1-378 ---------- ---------- ---------- ---------- ---------- BACU000979/1-719 KIIPATMGLV PSDLTGLGQR NSGFYEHRRS SVVLNLSGLE VFPGDLLVSD bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000344961/1-379 ---------- ---------- -------MIF MNTLRYLQTH EYLLDVDLWR ENSBTAP00000001083/1-391 ------AVWE LFTSECTYFL DHLLVLKMIF MNTLKYLQTH EYLLDVDLWR ENSTTRP00000001344/1-378 ---------- ---------- -------MIF MNTLKYLQTH DYLLDVDLWR BACU000979/1-719 GAADYLCHPL LLLNSVSLSK SKHLTSYQIF MNTLKYLQTH EYLLDVDLWR bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000344961/1-379 LFANLEELTQ TSLGFVNSLF GIIKDYVDAS EISSSLDFIS VLTKYFRGSL ENSBTAP00000001083/1-391 LFANLEELSQ TSFGFVNSLF RIFKDYIDIC ETSPSLDFIS VLTKYFRGSL ENSTTRP00000001344/1-378 LFANLEELSQ TSFGFV-SLF HIFKDYVDTS ETLPSLDFIS VLTKYFQGSL BACU000979/1-719 LFANLEELSQ TSFGFVNSLF HIFKDYVDTS ETLPSLDFIS VLTKYFQGSL bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000344961/1-379 CQSHQTYCLN YSAAIFYLES LRQRDDFGIY LKWCEQNEQC RRLHVPELLV ENSBTAP00000001083/1-391 CQSHQTYCLN YSAAVFYLES LKQRHDFGIY LKWCEQHDQC RRLHLPELLV ENSTTRP00000001344/1-378 CQSHQTYCLN YSAAVFYLES LRQRGDFGIY LKWCEDNEQC RRLHLPELLV BACU000979/1-719 CQSHQTYCLN YSAAVFYLES LRQREDFGIY LK-----VKY QRLHLPELLV bmy_03599T0/1-229 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000344961/1-379 APLQRLTRYP LLLKNIWKRS MDSAEKIMIY SIKEKVEKSI RDLEGKVKWL ENSBTAP00000001083/1-391 APLHRLTRYP LLLKNIWKRS TDSTEKIMIY SIKEKVEKAI QDLEGKVKWL ENSTTRP00000001344/1-378 APLHRLTRYP LLLKSIWKRS TDSTEKIMIY SIKEKVEKSI WDLEGKVKWL BACU000979/1-719 APLHRLTRYP LLLKNIWKRS TDSTEKIMIY SIKEKVEKSI WDLEGKVKWL bmy_03599T0/1-229 ---------- ---------- -------MIY SIKEKVEKSI WDLEGKVKWL 551 600 ENSP00000344961/1-379 DNFQKFRYLQ EIIVWPPLWD RDKRFFIPEC LKHIFKEHMA ENILSPTSRH ENSBTAP00000001083/1-391 DNFQKFRHLQ EIVVWPPLWD RDKRFFIPEC LKHIFKEHMA ENILSPTNRH ENSTTRP00000001344/1-378 DNFQKCRHLQ EIIVWPPLWD RDKRFFIPEC LKHVFKEHMA ENILSATNRH BACU000979/1-719 DNFQKCRHLQ EIIVWPPLWD RDKRFFIPEC LKHIFKEHMA ENILSPTNRH bmy_03599T0/1-229 DNFQKCRHLQ EIIVWPPLWD RDKRFFIPEC LKHIFKEHMA ENILSPTNRH 601 650 ENSP00000344961/1-379 LLYEGKLTLA ESTRFLDVYL FLFNDFLLVT KTKCNK--KK LGGSDPGLMC ENSBTAP00000001083/1-391 LLYEGKLTLA ESTRFLDVYL FLFDDFLLVT KTKRNKKVKK LGGSDPGLMC ENSTTRP00000001344/1-378 LLYEGKLTLA ESTRFLDVYL FLFDDFLLVT KTKRNK--KK LGGSDPGLMC BACU000979/1-719 LLYEGKLTLA ESTRFLDVYL FLFDDFLLVT KTKRNK--KK LGGSDPGLMC bmy_03599T0/1-229 LLYEGKLTLA ESTRFLDVYL FLFDDFLLVT KTKRNK--KK LGGSDPGLMC 651 700 ENSP00000344961/1-379 PSLTPELQAV IKEGGSCTVL DQPIPLDRLV VKSIEPLHVS VFGLRNAFLI ENSBTAP00000001083/1-391 PSLTAELQTV IREGGSCTVI DQPIPLDRLL VRGLDPLHVS VFGLRNAFLI ENSTTRP00000001344/1-378 PSLIPELQTA IKEGGSCMVL DQPIPLDRLV VRGLDPLHRS VFGLRNSFLI BACU000979/1-719 PSLIPELQTV IKEGGSCMVL DQPIPLDRLV VRGLDPLHMS VFGLRNSFLI bmy_03599T0/1-229 PSLIPELQTV IREGGSCMVL DQPIPLDRLV VRGLDPLHIS VFGLRNSFLI 701 750 ENSP00000344961/1-379 QHENRYRQCI AAFLLQAQTE NIKKTWMAQI TTAISCFTKS QETKKISLFT ENSBTAP00000001083/1-391 QHENRYRQCI AAFLLQAQTE NIKRTWIAQI TAAIS----- ---------- ENSTTRP00000001344/1-378 QHENSYQQCI AAFLLQAQTE NIKKTWIAQL TAAISCFTKS QETKMMSIFT BACU000979/1-719 QHENSYRQCI AAFLLQAQTE NIKIRL---- ---------- ---------- bmy_03599T0/1-229 QHENSYRQCI AAFLLQAQTE NIKKTWIAQL TAAISCFTKS QETKKMSLFT 751 800 ENSP00000344961/1-379 LPAESSEI ENSBTAP00000001083/1-391 -------- ENSTTRP00000001344/1-378 LPAESSEI BACU000979/1-719 -------- bmy_03599T0/1-229 LPAESSEI