KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:11 2014 Check: 00 .. Name: ENSP00000327487/1-526 Len: 532 Check: 2073 Weight: 1.00 Name: ENSBTAP00000001090/1-528 Len: 532 Check: 7447 Weight: 1.00 Name: bmy_15341T0/1-346 Len: 532 Check: 555 Weight: 1.00 Name: ENSTTRP00000015002/1-457 Len: 532 Check: 5606 Weight: 1.00 Name: BACU011516/1-529 Len: 532 Check: 785 Weight: 1.00 // 1 50 ENSP00000327487/1-526 MEPEPEPAAV EVPAGRVLSA RELFAARSRS QKLPQRSHGP KDFLPDGSAA ENSBTAP00000001090/1-528 MDPEPESASV EVPAGRVLSA PELFAARSRS QKLPQRSHGP KDFLPDGSEA bmy_15341T0/1-346 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015002/1-457 ---------- ---------- ---------- ---------- ---------- BACU011516/1-529 MEPEPESASV EVPAGRGLSV PELFAARSRS QKLPQRSHGP KDFLPDGSAA 51 100 ENSP00000327487/1-526 QAERLRRCRE ELWQLLAEQR VERLGSLVAA EWRPEEGFVE LKSPAGKFWQ ENSBTAP00000001090/1-528 QAERLRLCRQ ELWQLLAEER VERLGSLVAA EWRPEEGFVE LKSPAGKFWQ bmy_15341T0/1-346 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015002/1-457 ---------- ---------- ----GSLVTA E-RPEEGFVE SKSHAGKFWQ BACU011516/1-529 QAERLRVCRE ELWQLLAEER VERLGSLVAA EWRPEEGFVE LKSPAGKFWQ 101 150 ENSP00000327487/1-526 TMGFSEQGRQ RLHPEEALYL LECGSIHLFH QDLPLSIQEA YQLLLTDHTV ENSBTAP00000001090/1-528 TMGFSEQGRQ RLHPEEALYL LECGSIQLFH QDLPLSIQEA YQLLLTEDTV bmy_15341T0/1-346 ---------- ---------- -MCGS----- ---------- ---------- ENSTTRP00000015002/1-457 TMGFSEQGRQ RLHPEEALYL LECGSIQLFH QDLPLSIQEA YQLLLTEDTV BACU011516/1-529 TMGFSEQGRQ RLHPEEALYL LECGSIQLFH QDLPLSIQEA YQLLLTEDTV 151 200 ENSP00000327487/1-526 TFLQYQVFSH LKRLGYVVRR FQPSSVLSPY ERQLNLDASV QHLEDGDGKR ENSBTAP00000001090/1-528 TFLQYQVFSH LKRLGYVVRR FQPSSVLSPY ERQLNLDGGA QCLE---GKR bmy_15341T0/1-346 --------RA PQQSGADVLH FLPTSL---- ---------- ---------- ENSTTRP00000015002/1-457 TFLQYQVFSH LKRLGYVLRR FQASSVLSPY ERQLNLDGSV QRLEDRNGKR BACU011516/1-529 TFLQYQVFSH LKRLGYVLRR FQASSVLSPY ERQLNLDGSV QRLEDRNGKR 201 250 ENSP00000327487/1-526 KRSSSSPRSI NKKAKALDNS LQ-----PKS LAASSPPPCS QPSQCPEEKP ENSBTAP00000001090/1-528 KRRSSSSQSI NKKPKALQNP LQGMDGTPES PATCSPPPQN QNSCRPEEKP bmy_15341T0/1-346 -------RSI NKKPKVLENP LQGVDGTPES LATSSPPPRN QNSRCPEEKS ENSTTRP00000015002/1-457 KRRSSSSQSI NKKPKALENP LQGVDGTPES LATSSPPPRN QNSRCPEEKS BACU011516/1-529 KRRSSSSQSI NKKPKVLENP LQGVDGTLES LATSSPPPRN QNSRCPEEKS 251 300 ENSP00000327487/1-526 QESSPMKGPG GPFQLLGSLG PSPGPAREGV GCSWESGRAE NGVTGAGKRR ENSBTAP00000001090/1-528 QESSPIKSPV GPLQLLGSLK PCPGLGREGA QCSPENGKIE DGVTGAPKPR bmy_15341T0/1-346 QESSPVKGPV GPFQLLGSLE PCPRLAREGV RCSQESGKME NGVKGACKPR ENSTTRP00000015002/1-457 QESSPVKGPM GPFQLLGSLE PCPGLAREGV RCSQESGKME NGVKGACKPR BACU011516/1-529 QESSPVKGPM GPFQLLGSLE PCPRLAREGV RCSQESGKME NGVKGACKPR 301 350 ENSP00000327487/1-526 WNFEQISFPN MASDSRHTLL RAPAPELLPA NVAGRETDAE SWCQKLNQRK ENSBTAP00000001090/1-528 WNFEQISFPN MAADSRHTLL LAPAPELLPA NVAGRETDAE SWCQRLNQRK bmy_15341T0/1-346 WNFEQISFPN MASDSRHTLL LAPAPELLPA NVAGRETDAE SWCQKLNQRK ENSTTRP00000015002/1-457 WNFEQISFPN MASDSRHTLL LAPAPELLPA NVAGRETDAE SWCQKLNQQK BACU011516/1-529 WNFEQISFPN MASDSRHTLL LAPAPELLPA NVAGRETDAE SWCQKLNQRK 351 400 ENSP00000327487/1-526 EKLSRREREH HA-EAAQFQE DVNADPEVQR CSSWREYKEL LQRRQVQRSQ ENSBTAP00000001090/1-528 EKLSRRERER QA-EAQHFRE DVNADPQVQR CSSWREYKQL LQRRHLQKTQ bmy_15341T0/1-346 EKLSRREREQ QA-EAQHFRE DVNSDPEVQR CSSWQEYKQL LQRRHLQKTQ ENSTTRP00000015002/1-457 EKLSRREREQ QAEEAQRFRE DVNSDPEVQR CSSWPEYKQL LQRRHLQKTQ BACU011516/1-529 EKLSR--REQ QA-EAQHFRE DVNSDPEVQR CSSWQEYKQL LQRRHLQKTQ 401 450 ENSP00000327487/1-526 RRAPHLWGQP VTPLLSPGQA SSPAVVLQHI SVLQTTHLPD GGARLLEKSG ENSBTAP00000001090/1-528 SRPPHLWDQP VTPLLSPDRA DSPASVLQQI SVLQTTHLAE GGARLLEKPG bmy_15341T0/1-346 SRPAHLWDQP VTPLLSPGQA DSPATVLQHI SVLQTTHLAD GGARLVEKSA ENSTTRP00000015002/1-457 SRPPHLWDQP VTPLLSPGQA DSPATVLQHI SVLQMTHLAD GGVRLVEKSG BACU011516/1-529 SRPPHLWDQP VTPLLSPGQA DSPATVLQQI SVLQTTHLAD GGARLVEKSA 451 500 ENSP00000327487/1-526 GLEIIFDVYQ ADAVATFRKN NPGKPYARMC ISGFDEPVPD LCSLKRLSYQ ENSBTAP00000001090/1-528 GLEISFDVYQ ADAVATFRKN NPGKPYVRLC ISGSDELVPD LCTLKRLSYQ bmy_15341T0/1-346 GLEISFDVYQ ADAVATFRKN NPGKPYVRMC ISGFDEPVPD LCTLKRLSYQ ENSTTRP00000015002/1-457 GLEISFDVYQ ADAVATFRKN NPGKPYVRMC ISGFDEPVPD LCTLKRLSYQ BACU011516/1-529 GLEISFDVYQ ADAVATFRKN NPGKPYVRMC ISGFDEPVPD LCTLKRLSYQ 501 550 ENSP00000327487/1-526 SGDVPLIFAL VDHGDISFYS FRDFTLPQDV GH ENSBTAP00000001090/1-528 SGDVPLIFAL VDHGDISFYS FRDFTLPRDL EH bmy_15341T0/1-346 SGDVPLIFAL VDHGDISFYS FRDFTLPRDL EH ENSTTRP00000015002/1-457 SGDVPLIFAL VDHGDISFYS FRDFTLPRDL EH BACU011516/1-529 SGDVPLIFAL VDHGDISFYS FRDFTLPRDL EH