KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:12 2014 Check: 00 .. Name: ENSP00000261716/1-1001 Len: 1001 Check: 8221 Weight: 1.00 Name: ENSBTAP00000001093/1-1001 Len: 1001 Check: 7447 Weight: 1.00 Name: bmy_00134T0/1-755 Len: 1001 Check: 1417 Weight: 1.00 Name: ENSTTRP00000015477/1-1000 Len: 1001 Check: 7953 Weight: 1.00 Name: BACU010488/1-149 Len: 1001 Check: 8476 Weight: 1.00 // 1 50 ENSP00000261716/1-1001 MPSTNRAGSL KDPEIAELFF KEDPEKLFTD LREIGHGSFG AVYFARDVRT ENSBTAP00000001093/1-1001 MPSTNRAGSL KDPEIAELFF KEDPEKLFTD LREIGHGSFG AVYFARDVRT bmy_00134T0/1-755 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015477/1-1000 MPSTNRAGSL KDPEIAELFF KEDPEKLFTD LREIGHGSFG AVYFARDVRT BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000261716/1-1001 NEVVAIKKMS YSGKQSTEKW QDIIKEVKFL QRIKHPNSIE YKGCYLREHT ENSBTAP00000001093/1-1001 NEVVAIKKMS YSGKQSTEKW QDIIKEVKFL QRIKHPNSIE YKGCYLREHT bmy_00134T0/1-755 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015477/1-1000 NEVVAIKKMS YSGKQSTEKW QDIIKEVKFL QRIKHPNSIE YKGCYLREHT BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000261716/1-1001 AWLVMEYCLG SASDLLEVHK KPLQEVEIAA ITHGALQGLA YLHSHTMIHR ENSBTAP00000001093/1-1001 AWLVMEYCLG SASDLLEVHK KPLQEVEIAA ITHGALQGLA YLHSHTMIHR bmy_00134T0/1-755 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015477/1-1000 AWLVMEYCLG SASDLLEVHK KPLQEVEIAA ITHGALQGLA YLHSHTMIHR BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000261716/1-1001 DIKAGNILLT EPGQVKLADF GSASMASPAN SFVGTPYWMA PEVILAMDEG ENSBTAP00000001093/1-1001 DIKAGNILLT EPGQVKLADF GSASMASPAN SFVGTPYWMA PEVILAMDEG bmy_00134T0/1-755 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015477/1-1000 DIKAGNILLT EPGQVKLADF GSASMASPAN SFVGTPYWMA PEVILAMDEG BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000261716/1-1001 QYDGKVDVWS LGITCIELAE RKPPLFNMNA MSALYHIAQN ESPTLQSNEW ENSBTAP00000001093/1-1001 QYDGKVDVWS LGITCIELAE RKPPLFNMNA MSALYHIAQN ESPTLQSNEW bmy_00134T0/1-755 ---------- ---------- -------MNA MSALYHIAQN ESPTLQSNEW ENSTTRP00000015477/1-1000 QYDGKVDVWS LGITCIELAE RKPPLFNMNA MSALYHIAQN ESPTLQSNEW BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000261716/1-1001 SDYFRNFVDS CLQKIPQDRP TSEELLKHIF VLRERPETVL IDLIQRTKDA ENSBTAP00000001093/1-1001 SDYFRNFVDS CLQKIPQDRP TSEELLKHMF VLRERPETVL IDLIQRTKDA bmy_00134T0/1-755 SDYFRNFVDS CLQKIPQDRP TSEELLKHMF VLRERPETVL IDLIQRTKDA ENSTTRP00000015477/1-1000 SDYFRNFVDS CLQKIPQDRP TSEELLKHMF VLRERPETVL IDLIQRTKDA BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000261716/1-1001 VRELDNLQYR KMKKLLFQEA HNGPAVEAQE EEEEQDHGVG RTGTVNSVGS ENSBTAP00000001093/1-1001 VRELDNLQYR KMKKLLFQEA HNGPAVEAQE EEEEQDHGVG RTGTVNSVGS bmy_00134T0/1-755 VRELDNLQYR KMKKLLFQEA HNGPAVEAQE EEEEQDHGVG RTGTVNSVGS ENSTTRP00000015477/1-1000 VRELDNLQYR KMKKLLFQEA HNGPAVEAQE EEEEQDHGVG RTGTVNSVGS BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000261716/1-1001 NQSIPSMSIS ASSQSSSVNS LPDVSDDKSE LDMMEGDHTV MSNSSVIHLK ENSBTAP00000001093/1-1001 NQSIPSMSIS ASSQSSSVNS LPDASDDKSE LDMMEGDHTV MSNSSVIHLK bmy_00134T0/1-755 NQSIPSMSIS ASSQSSSVNS LPDASDDKSE LDMMEGDHTV MSNSSVIHLK ENSTTRP00000015477/1-1000 NQSIPSMSIS ASSQSSSVNS LPDASDDKSE LDMMEGDHTV MSNSSVIHLK BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000261716/1-1001 PEEENYREEG DPRTRASDPQ SPPQVSRHKS HYRNREHFAT IRTASLVTRQ ENSBTAP00000001093/1-1001 PEEENYREEG DPRTRASDPQ SPPQVSRHKS HYRNREHFAT IRTASLVTRQ bmy_00134T0/1-755 PEEENYREEG DPRTRASDPQ SPPQVSRHKS HYRNREHFAT IRTASLVTRQ ENSTTRP00000015477/1-1000 PEEENYREEG DPRTRASDPQ SPPQVSRHKS HYRNREHFAT IRTASLVTRQ BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000261716/1-1001 MQEHEQDSEL REQMSGYKRM RRQHQKQLMT LENKLKAEMD EHRLRLDKDL ENSBTAP00000001093/1-1001 MQEHEQDSEL REQMSGYKRM RRQHQKQLMT LENKLKAEMD EHRLRLDKDL bmy_00134T0/1-755 MQEHEQDSEL REQMSGYKRM RRQHQKQLMT LENKLKAEMD EHRLRLDKDL ENSTTRP00000015477/1-1000 MQEHEQDSEL REQMSGYKRM RRQHQKQLMT LENKLKAEMD EHRLRLDKDL BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000261716/1-1001 ETQRNNFAAE MEKLIKKHQA AMEKEAKVMS NEEKKFQQHI QAQQKKELNS ENSBTAP00000001093/1-1001 ETQRNNFAAE MEKLIKKHQA AMEKEAKVMA NEEKKFQQHI QAQQKKELNS bmy_00134T0/1-755 ETQRNNFAAE MEKLIKKHQA AMEKEAKVMA NEEKKFQQHI QAQQKKELNS ENSTTRP00000015477/1-1000 ETQRNNFAAE MEKLIKKHQA AMEKEXXXXX XXXKKFQQH- QPQQKKELNS BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000261716/1-1001 FLESQKREYK LRKEQLKEEL NENQSTPKKE KQEWLSKQKE NIQHFQAEEE ENSBTAP00000001093/1-1001 FLESQKREYK LRKEQLKEEL NENQSTPKKE KQEWLSKQKE NIQHFQAEEE bmy_00134T0/1-755 FLESQKREYK LRKEQLKEEL NENQSTPKKE KQEWLSKQKE NIQHFQAEEE ENSTTRP00000015477/1-1000 FLESQKREYK LRKEQLKEEL NENQSTPKKE KQEWLSKQKE NIQHFQAEEE BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000261716/1-1001 ANLLRRQRQY LELECRRFKR RMLLGRHNLE QDLVREELNK RQTQKDLEHA ENSBTAP00000001093/1-1001 ANLLRRQRQY LELECRRFKR RMLLGRHNLE QDLVREELNK RQTQKDLEHA bmy_00134T0/1-755 ANLLRRQRQY LELECRRFKR RI-------- ---------- -QTQKDLEHA ENSTTRP00000015477/1-1000 ANLLRRQRQY LELECRRFKR RMLLGRHNLE QDLVREELNK RQTQKDLEHA BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000261716/1-1001 MLLRQHESMQ ELEFRHLNTI QKMRCELIRL QHQTELTNQL EYNKRREREL ENSBTAP00000001093/1-1001 MLLRQHESMQ ELEFRHLNTI QKMRCELIRL QHQTELTNQL EYNKRREREL bmy_00134T0/1-755 MLLRQHESMQ ELEFRHLNTI QKMRCELIRL QHQTELTNQL EYNKRREREL ENSTTRP00000015477/1-1000 MLLRQHESMQ ELEFRHLNTI QKMRCELIRL QHQTELTNQL EYNKRREREL BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000261716/1-1001 RRKHVMEVRQ QPKSLKSKEL QIKKQFQDTC KIQTRQYKAL RNHLLETTPK ENSBTAP00000001093/1-1001 RRKHVMEVRQ QPKSLKSKEL QIKKQFQDTC KIQTRQYKAL RNHLLETTPK bmy_00134T0/1-755 RRKHVMEVRQ QPKSLKSKEL QIKKQFQDTC KIQTRQYKAL RNHLLETTPK ENSTTRP00000015477/1-1000 RRKHVMEVRQ QPKSLKSKEL QIKKQFQDTC KIQTRQYKAL RNHLLETTPK BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000261716/1-1001 SEHKAVLKRL KEEQTRKLAI LAEQYDHSIN EMLSTQALRL DEAQEAECQV ENSBTAP00000001093/1-1001 SEHKAVLKRL KEEQTRKLAI LAEQYDHSIN EMLSTQALRL DEAQEAECQV bmy_00134T0/1-755 SEHKAVLKRL KEEQTRKLAI LAEQYDHSIN EMLSTQALRL DEAQEAECQV ENSTTRP00000015477/1-1000 SEHKAVLKRL KEEQTRKLAI LAEQYDHSIN EMLSTQALRL DEAQEAECQV BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000261716/1-1001 LKMQLQQELE LLNAYQSKIK MQAEAQHDRE LRELEQRVSL RRALLEQKIE ENSBTAP00000001093/1-1001 LKMQLQQELE LLNAYQSKIK MQAEAQHDRE LRELEQRVSL RRALLEQKIE bmy_00134T0/1-755 LKMQLQQELE LLNAYQSKIK MQAEAQHDRE LRELEQRVSL RRALLEQKIE ENSTTRP00000015477/1-1000 LKMQLQQELE LLNAYQSKIK MQAEAQHDRE LRELEQRVSL RRALLEQKIE BACU010488/1-149 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000261716/1-1001 EEMLALQNER TERIRSLLER QAREIEAFDS ESMRLGFSNM VLSNLSPEAF ENSBTAP00000001093/1-1001 EEMLALQNER TERIRSLLER QAREIEAFDS ESMRLGFSNM VLSNLSPEAF bmy_00134T0/1-755 EEMLALQNER TERIRSLLER QAREIEAFDS ESMRLGFSNM VLSNLSPEAF ENSTTRP00000015477/1-1000 EEMLALQNER TERIRSLLER QAREIEAFDS ESMRLGFSNM VLSNLSPEAF BACU010488/1-149 --MLALQNER TERIRSLLER QAREIEAFDS ESMRLGFSNM VLSNLSPEAF 901 950 ENSP00000261716/1-1001 SHSYPGASGW SHNPTGGPGP HWGHPMGGPP QAWGHPMQGG PQPWGHPSGP ENSBTAP00000001093/1-1001 SHSYPGASGW SHNPTGGPGP HWGHPMGGPP QAWGHPMQGG PQPWGHPSGP bmy_00134T0/1-755 SHSYPGASGW SHNPTGGPGP HWGHPMGGPP QAWGHPMQGG PQPWGHPSGP ENSTTRP00000015477/1-1000 SHSYPGASGW SHNPTGGPGP HWGHPMGGPP QAWGHPMQGG PQPWGHPSGP BACU010488/1-149 SHSYPGASGW SHNPTGGPGP HWGHPMGGPP QAWGHPMQGG PQPWGHPSGP 951 1000 ENSP00000261716/1-1001 MQGVPRGSSM GVRNSPQALR RTASGGRTEQ GMSRSTSVTS QISNGSHMSY ENSBTAP00000001093/1-1001 MQGVPRGSSM GVRNSPQALR RTASGGRTEQ GMSRSTSVTS QISNGSHMSY bmy_00134T0/1-755 MQGVPRGSSM GVRNSPQALR RTASGGRTEQ GMSRSTSVTS QISNGSHMSY ENSTTRP00000015477/1-1000 MQGVPRGSSM GVRNSPQALR RTASGGRTEQ GMSRSTSVTS QISNGSHMSY BACU010488/1-149 MQGVPRGSSM GVRNSPQALR RTASGGRTEQ GMSRSTSVTS QISNGSHMSY 1001 1050 ENSP00000261716/1-1001 T ENSBTAP00000001093/1-1001 T bmy_00134T0/1-755 T ENSTTRP00000015477/1-1000 T BACU010488/1-149 T