KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:13 2014 Check: 00 .. Name: ENSP00000355551/1-399 Len: 415 Check: 6542 Weight: 1.00 Name: ENSBTAP00000001096/1-400 Len: 415 Check: 5844 Weight: 1.00 Name: BACU003380/1-399 Len: 415 Check: 5165 Weight: 1.00 Name: bmy_10466T0/1-305 Len: 415 Check: 7556 Weight: 1.00 Name: ENSTTRP00000013321/1-245 Len: 415 Check: 5313 Weight: 1.00 // 1 50 ENSP00000355551/1-399 MRPERPRPRG SAPGPMETPP WDPARNDSLP PTLTPAVPPY VKLGLTVVYT ENSBTAP00000001096/1-400 -EAGASGPRR SAPGPMEAQP WDPLRNDSLP PTLTPAVPPY VKLGLTIVYT BACU003380/1-399 ---------- -----MEAPP WDPLRNDSLP PTLTPAVPPY VKLGLTIVYT bmy_10466T0/1-305 ---------- ---------- --MAEDAGFP EGHCSTQGQ- ---------- ENSTTRP00000013321/1-245 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000355551/1-399 VFYALLFVFI YVQLWLVLRY RHKRLSYQSV FLFLCLFWAS LRTVLFSFYF ENSBTAP00000001096/1-400 VFYSLLFVFI YVQLWLVLRY RHKRLSYQSV FLFLCLFWAS LRTVLFSFYF BACU003380/1-399 VFYSLLFLFI YVQLWLVLRY RHKRLSYQSV FLFLCLFWAS LRTVLFSFYF bmy_10466T0/1-305 ---------- ---------- QEERRGAQGM FGSSVQRESR MQGVQV---- ENSTTRP00000013321/1-245 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000355551/1-399 KDFVAANSLS PFVFWLLYCF PVCLQFFTLT LMNLYFTQ-- ---------- ENSBTAP00000001096/1-400 KDFVAANALS PFVFWLLYCF PVCLQFFTLT LMNLYFTQ-- ---------- BACU003380/1-399 KDFVAANALS PFVFWLLYCF PVCLQFFTLT LMNLYFTQGD PEAQERKESL bmy_10466T0/1-305 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013321/1-245 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000355551/1-399 --VIFKAKSK YSPELLKYRL PLYLASLFIS LVFLLVNLTC AVLVKTGNWE ENSBTAP00000001096/1-400 --VIFKAKSK YSPELLKYRL PLYLASLFIS LVFLLVNLTC AVLVKTGTWE BACU003380/1-399 SGVIFKAKSK YSPELLKYRL PLYLASLFIS LVFLLVNLTC AVLVKTGTWE bmy_10466T0/1-305 --VIFKAKSK YSPELLKYRL PLYLASLFIS LVFLLVNLTC AVLVKTGTWE ENSTTRP00000013321/1-245 ---------- ---------L PLYLASLFIS LVFLLVNLTC AVLVKTGTWE 201 250 ENSP00000355551/1-399 RKVIVSVRVA INDTLFVLCA VSLSICLYKI SKMSLANIYL ESKGSSVCQV ENSBTAP00000001096/1-400 RKAIVSVRVA INDTLFVLCA VSLSICLYKI SKMSLANIYL ESKGSSVCQV BACU003380/1-399 RKGIVSVRVA INDSLFVLCA VSLSICLYKI SKMSLANIYL ESKGSSVCQV bmy_10466T0/1-305 RKGLVSVRVA INDSLFVLCA VSLSICLYKI SKMSLANIYL ESKGSSVCQV ENSTTRP00000013321/1-245 RKGIVSVRVA INDSLFVLCA VSLSICLYKI SKMSLANIYL ESKGSSVCQV 251 300 ENSP00000355551/1-399 TAIGVTVILL YTSRACYNLF ILSFSQNKSV HSFDYDWYNV SDQADLKNQL ENSBTAP00000001096/1-400 TAIGVTVILL YTSRACYNLF ILSFSQSKNV HSFDYDWYNV SDQADLKNQL BACU003380/1-399 TAIGVTVILL YASRACYNLF ILSFSQSKNV HSFDYDWYNV SDQADLKNQL bmy_10466T0/1-305 TAVGVTVILL YASRACYNLF ILSFSQSKNV HSFDYDWYNV SDQADLKNQL ENSTTRP00000013321/1-245 TAVGVTVILL YASRACYNLF ILSFSQSRNV HSFDYDWYNV SDQADLKNQL 301 350 ENSP00000355551/1-399 GDAGYVLFGV VLFVWELLPT TLVVYFFRVR NPTKDLTNPG MVPSHGFSPR ENSBTAP00000001096/1-400 GDAGYIVFGV VLFVWELLPT TLVVYFFRVR NSTKDLTNPG MVPSHGFGPR BACU003380/1-399 GDAGYMVFGV VLFVWELLPT TLVVYFFRVR NSAKDLTNPG MVPSHGFGPR bmy_10466T0/1-305 GDAGYIVFGV VLFVWELLPT TLVVYFFRVR NSXKDLTNPG MVPSHGFGPR ENSTTRP00000013321/1-245 GDAGYIVFGV VLFVWELLPT TLVVYFFRVR NSAKDLTNPG MVPSHGFGPR 351 400 ENSP00000355551/1-399 SYFFDNPRRY DSDDDLAWNI APQGLQGGFA PDYYDWGQQT -NSFLAQAGT ENSBTAP00000001096/1-400 SYFFDNPRRY DSDDDLAWNI APQGLQGSFA PDYYDWGQQT ANSFLAQVGT BACU003380/1-399 SYFFDNPRRY DSDDDLAWNI APQGLQGSFA PDCYDWGQQT -NSFLAQVGT bmy_10466T0/1-305 SYFFDNPRRY DSDDDLAWNI APQGLQGSFA PDCYDWGQQT -NSFLAQVGT ENSTTRP00000013321/1-245 SYFFDNPRRY DSDDDLAWNI TPQGLQGSFA PDCYDWGQQT -NSFLAQVGT 401 450 ENSP00000355551/1-399 LQ-DSTLDPD KPSLG ENSBTAP00000001096/1-400 LQPDSILDPD KPSHG BACU003380/1-399 LQPDSILDPD KPSHG bmy_10466T0/1-305 LQPDSILDPD KPSHG ENSTTRP00000013321/1-245 LQPDSTLDPD KPSHG