KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:14 2014 Check: 00 .. Name: bmy_10465T0/1-452 Len: 485 Check: 6844 Weight: 1.00 Name: ENSP00000346635/1-467 Len: 485 Check: 4662 Weight: 1.00 Name: ENSBTAP00000001099/1-471 Len: 485 Check: 3217 Weight: 1.00 Name: ENSTTRP00000013316/1-464 Len: 485 Check: 4638 Weight: 1.00 Name: BACU003381/1-188 Len: 485 Check: 8860 Weight: 1.00 // 1 50 bmy_10465T0/1-452 MSRGVRRAGA GQGAAAAVQL LVTLSFLPSV VEAQVTGVLD DCLCDVDSID ENSP00000346635/1-467 MSQGVRRAGA GQGVAAAVQL LVTLSFLRSV VEAQVTGVLD DCLCDIDSID ENSBTAP00000001099/1-471 MSPGVRRAGS GQGAAAAVQL LVTLSFLPSV VEAQVTGVLD DCLCDIDSID ENSTTRP00000013316/1-464 MSRGVGRAGA GQGAAAALQL LVTLSFLPSV VEAQVTGVLD DCLCDVDSID BACU003381/1-188 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_10465T0/1-452 NFNTFKIFPK IKKLQERDYF RYY------- ---------- ---------- ENSP00000346635/1-467 NFNTYKIFPK IKKLQERDYF RYYKVNLKRP CPFWAEDGHC SIKDCHVEPC ENSBTAP00000001099/1-471 NFNTFKIFPK IKKLQERDYF RYYKVNLKRP CPFWAEDLQL AVISCFIEPA ENSTTRP00000013316/1-464 NFNTFKIFPK IKKLQERDYF RYYKVNLKRP CPFWAEDGHC SIKDCHVEPC BACU003381/1-188 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_10465T0/1-452 -----KSKIP VGIKAGSSNK YLKVANNTRE LEDCEQASKL GAINSTLSNQ ENSP00000346635/1-467 P----ESKIP VGIKAGHSNK YLKMANNTKE LEDCEQANKL GAINSTLSNQ ENSBTAP00000001099/1-471 SCFVGKSKIP VGIKAGNSNK YSKVANNTKE LEDCEQASKL GAINSTLSNQ ENSTTRP00000013316/1-464 P----ESKIP VGIKAGSSNK YLKVANNTKE LEDCEQASKL GAINSTLSNQ BACU003381/1-188 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_10465T0/1-452 SREAFIDWAR YDDSQDHFCE LDDERSPAAQ YVDLLLNPER YTGYKGSSAW ENSP00000346635/1-467 SKEAFIDWAR YDDSRDHFCE LDDERSPAAQ YVDLLLNPER YTGYKGTSAW ENSBTAP00000001099/1-471 SKEAFIDWAR YDDSQDHFCE LDDERSPAAQ YVDLLLNPER YTGYKGSSAW ENSTTRP00000013316/1-464 SREAFIDWAR YDDSQDHFCE LDDERSPAAQ YVDLLLNPER YTGYKGPSAW BACU003381/1-188 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_10465T0/1-452 RVWNSIYEEN CFKPRSVYRP LNPLAPSRGE DDGESFYRWL EGLCLEKRVF ENSP00000346635/1-467 RVWNSIYEEN CFKPRSVYRP LNPLAPSRGE DDGESFYTWL EGLCLEKRVF ENSBTAP00000001099/1-471 RVWNSIYEEN CFKPRSVYRP LNPLAPSRGE DDGESFYTWL EGLCLEKRVF ENSTTRP00000013316/1-464 RVWNSIYEEN CFKPRSVYRP LNPLAPSRGG FLGESFYTWL EGLCLEKRVF BACU003381/1-188 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_10465T0/1-452 YKLISGLHAS INLHLCANYL LEETWGKPTW GPNMKEFKCR FDPVETKGEG ENSP00000346635/1-467 YKLISGLHAS INLHLCANYL LEETWGKPSW GPNIKEFKHR FDPVETKGEG ENSBTAP00000001099/1-471 YKLISGLHAS INLHLCANYL LEETWGKPSW GPNMKEFKRR FDPVETKGEG ENSTTRP00000013316/1-464 YKLISGLHAS INLHLCANYL LEETWGKPTW GPNMKEFKRR FDPVETKGEG BACU003381/1-188 ---------- ---------- ---------- ---MKEFKRR FDPVETKGEG 301 350 bmy_10465T0/1-452 PRRLKNLYFL YLIELRALSK VAPYFERSIV DLYTGNVKED ADTKTLLLDI ENSP00000346635/1-467 PRRLKNLYFL YLIELRALSK VAPYFERSIV DLYTGNAEED ADTKTLLLNI ENSBTAP00000001099/1-471 PRRLKNLYFL YLIELRALSK VAPYFERSIV DLYTGNVQED ADTKTLLLNI ENSTTRP00000013316/1-464 PRRLKNLYFL YLIELRALSK VAPYFERSIV DLYTGNVKED ADTKTLLLNI BACU003381/1-188 PRRLKNLYFL YLIELRALSK VAPYFERSIV DLYTGNVKED ADTKTLLLNI 351 400 bmy_10465T0/1-452 FQDTKSFPMH FDEKSMFAGD KKGAKSLKEE FRLHFKNISR IMDCVGCDKC ENSP00000346635/1-467 FQDTKSFPMH FDEKSMFAGD KKGAKSLKEE FRLHFKNISR IMDCVGCDKC ENSBTAP00000001099/1-471 FQDTKSFPMH FDEKSMFAGD KKGAKSLKEE FRLHFKNISR IMDCVGCDKC ENSTTRP00000013316/1-464 FQDTKSFPMH FDEKSMFAGD KKGAKSLKEE FRLHFKNISR IMDCVGCDKC BACU003381/1-188 FQDTKSFPMH FDEKSMFAGD KKGAKSLKEE FRLHFKNISR IMDCVGCDKC 401 450 bmy_10465T0/1-452 RLWGKLQTQG LGTALKILFS EKEIQKLPEN SPSKGFQLTR QEIVALLNAF ENSP00000346635/1-467 RLWGKLQTQG LGTALKILFS EKEIQKLPEN SPSKGFQLTR QEIVALLNAF ENSBTAP00000001099/1-471 RLWGKLQTQG LGTALKILFS EKEIQKLPEN SPSKGFQLTR QEIVALLNAF ENSTTRP00000013316/1-464 RLWGKLQTQG L-TALKILFS EKEIQKLPEI SPSKGFQLTR -EIVALLNAF BACU003381/1-188 RLWGKLQTQG LGTALKILFS EKEIQKLPEN SPSKGFQLTR QEIVALLNAF 451 500 bmy_10465T0/1-452 GSKDFTCCSP VFKDDHAFYK YERVTEFQSL ITTQ- ENSP00000346635/1-467 GRLSTSI--- ---------- -RDLQNFKVL LQHSR ENSBTAP00000001099/1-471 GRLSTSI--- ---------- -RELQNFKVL LQHSR ENSTTRP00000013316/1-464 -RLSTSI--- ---------- -KELQNFKVL LQHSR BACU003381/1-188 GRLSTSI--- ---------- -KELQNFKVL LQHSR