KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:14 2014 Check: 00 .. Name: ENSP00000322784/1-309 Len: 315 Check: 9441 Weight: 1.00 Name: ENSBTAP00000001104/1-315 Len: 315 Check: 537 Weight: 1.00 Name: bmy_19358T0/1-240 Len: 315 Check: 4706 Weight: 1.00 Name: BACU018578/1-285 Len: 315 Check: 3309 Weight: 1.00 // 1 50 ENSP00000322784/1-309 MTLGNSTEVT EFYLLGFGAQ HEFWCILFIV FLLIYVTSIM GNSGIILLIN ENSBTAP00000001104/1-315 MTEGNSTEVT EFFLLGFGAQ YKYQYFLFTG FLVIYVTSMV GNIGMILLIK bmy_19358T0/1-240 MTQRNSTEVT EFFLLGFGAR HKFRYVLFTV FLVIYGTSVV GNVGMILLFK BACU018578/1-285 MTQRNSTEVT EFFLLGFGAR HKFRYVLFTV FLVIYGTSVV GNVGMILLIK 51 100 ENSP00000322784/1-309 TDSRFQTLTY FFLQHLAFVD ICYTSAITPK MLQSFTEEKN LMLFQGCVIQ ENSBTAP00000001104/1-315 TDSRLQTPMY FFLQHLAFVD ICYTSAITPK MLQNFTVGSK LISFKGCVMQ bmy_19358T0/1-240 TDSRLQTPMY FFLQQLAFVD ICYTSAVTPK MLQNFIVENK SISFKGCVKQ BACU018578/1-285 TDSRLQTPMY FYLQQLAFVD ICYTSAVTPK MLQNFIVENK SISFKGCVMQ 101 150 ENSP00000322784/1-309 FLVYATFATS DCYLLAMMAV DPYVAICKPL HYTVIMSRTV CIRLVAGSYI ENSBTAP00000001104/1-315 LLIYATFATS DCYLLATMAV DRYVAICNPL HYPTVMSRRV CIPLVAGSYI bmy_19358T0/1-240 LLVYATFVTS DSYLLAAMAV DCYVAICNPI RYPIVMAQRV CIQLVAGSYV BACU018578/1-285 LLVYATFATS DSYLLAAMTV DCYVAICNPL RYPIVMAQRV CIQLVAGSCV 151 200 ENSP00000322784/1-309 MGSINASVQT GFTCSLSFCK SNSINHFFCD VPPILALSCS NVDINIMLLV ENSBTAP00000001104/1-315 MGFINASVHT GFTFSLAFCK GNTINHFFCD VPPILALSCS NIDINIMLLA bmy_19358T0/1-240 MGSINASVHT GFTFSLVFCK GSTINHLFCD VPPVLALSCS NIDNNIMLLV BACU018578/1-285 MGSINASVHT GFTFSLVFCK GSTINHFFCD VPPVLAFSCS NIDNNIMLLV 201 250 ENSP00000322784/1-309 VFVGSNLIFT GLVVIFSYIY IMATILKMSS SAGRKKSFST CASHLTAVTI ENSBTAP00000001104/1-315 VFVGFNLIFT ELVIIFSYGN IITTILKMSS TTGRKKAFST CASHLAAVTI bmy_19358T0/1-240 VFVGFNLIFA MLVII----- ---------- ---------- ---------- BACU018578/1-285 VFVGFNLIFA VK-------- ---------- --------EK SLLHLTAVTI 251 300 ENSP00000322784/1-309 FYGTLSYMYL QSHSNNSQEN MKVAFIFYGT VIPMLNPLIY SLRNKEVKEA ENSBTAP00000001104/1-315 FYGTLSYMYL QPHSNNSQEN MKVASMFYGI VIPMLNPLIY SLRNKDVKES bmy_19358T0/1-240 FS-------- ---------- ------WENI IAAILKMSST AGRKKALST- BACU018578/1-285 FCGAVSYMYL QSHSNNSQEN MKVASVFYGI VIPMLNPLIY SLRNKEAKEA 301 350 ENSP00000322784/1-309 LKVI-GKKLF ----- ENSBTAP00000001104/1-315 LKVIWKKKIL LGWTK bmy_19358T0/1-240 ---------- ----- BACU018578/1-285 LKVI-RKKIL LD---