KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:15 2014 Check: 00 .. Name: ENSP00000370981/1-596 Len: 634 Check: 8781 Weight: 1.00 Name: ENSTTRP00000012943/1-585 Len: 634 Check: 937 Weight: 1.00 Name: ENSBTAP00000001114/1-627 Len: 634 Check: 9004 Weight: 1.00 Name: bmy_22316T0/1-598 Len: 634 Check: 2525 Weight: 1.00 Name: BACU002001/1-589 Len: 634 Check: 3395 Weight: 1.00 // 1 50 ENSP00000370981/1-596 ---------- ---------- ---------- --MGSVSSLI SGHSFHSKHC ENSTTRP00000012943/1-585 ---------- ---------- ---------- --MGSVSSLI SGHGFHSKHC ENSBTAP00000001114/1-627 MTAVSSRSQD CPAAPATPGP HSAPPVLGPR VAMGSVSSLI SGHGFHSKHC bmy_22316T0/1-598 ---------- ---------- ---------- --MGSVSSLI SGHGFHSKHC BACU002001/1-589 ---------- ---------- ---------- --MGSVSSLI SGHGFHSKHC 51 100 ENSP00000370981/1-596 RASQYKLRKS SHLKKLNRYS DGLLRFGFSQ DSGHGKSSSK MGKSEDFFYI ENSTTRP00000012943/1-585 RASQYKLRKS SHLKKLNRYS DGLLRFGFSQ DSGHGKSSSK LGKSEDFFYI ENSBTAP00000001114/1-627 RASQYKLRKS SHLKKLNRYS DGLLRFGFSQ DSGHGKSSSK MGKSEDFFYI bmy_22316T0/1-598 RASQYKLRKS SHLKKLNRYS DGLLRFGFSQ DSGHGKSSSK MGKSEDFFYI BACU002001/1-589 RASQYKLRKS SHLKKLNRYS DGLLRFGFSQ DSGHGKSSSK MGKSEDFFYI 101 150 ENSP00000370981/1-596 KVSQKARGSH HPDYTALSSG DLGGQAGVDF DPSTPPKLMP FSNQLEMGSE ENSTTRP00000012943/1-585 KVSQKARGSH HPDYTALSSG DLGGQAGVDF GPSTPPKLMP FSNQLEMDLE ENSBTAP00000001114/1-627 KVSQKARGSH RPDYTALSSG DLGGQAGVDF DPSTPPKLMP FSNQLEMGSE bmy_22316T0/1-598 KVSQKGRGSH RPDYTALSSG DLGGQAGVDF GPSTPPKLMP FSNQLEMDLE BACU002001/1-589 KVSQKARGSH RPDYTALSSG DLGGQAGVDF GPSTPPKLMP FSNQLEMDLD 151 200 ENSP00000370981/1-596 KGAVRPTAFK PVLPRSGAIL HSSPESASHQ LHPAPPDKPK EQELKPGLCS ENSTTRP00000012943/1-585 KGAVRPTAFK PVLPRSGAIL HSSPESASHQ LHPAPPDKPE EQGLKPGLCS ENSBTAP00000001114/1-627 KGAVRPTAFK PVLPRSGAIL HSSPESAGHQ LHPAPLDKPK EQELKPSLCS bmy_22316T0/1-598 KGAVRPTAFK PVLPRSGAIL HSSPESASHQ LHPAPPDKPK EQELKPGLCS BACU002001/1-589 KGAVRPTAFK PVLPRSGAIL HSSPESASHQ LHPAPPDKPK EQELKPSLCS 201 250 ENSP00000370981/1-596 GALSDSGRNS MSSLPTHSTS SSYQLDPLVT PVGPTSRFGG SAHNITQGIV ENSTTRP00000012943/1-585 GALSDSGRNS MSSLPTHSTT SSYQLDPLVT PVG-ASRFGG SAHNITQGIL ENSBTAP00000001114/1-627 GALSDSGRNS MSSLPTHSTS SSYQLDPLVT PVGPASRFGG SAHNITQGIV bmy_22316T0/1-598 GALSDSGRNS MSSLPTHSTT SSYQLDPLVT PVGPASRFGG SAHNITQGII BACU002001/1-589 GALSDSGRNS MSSLPTHSTT SSYQLDPLVT PVGPASRFGG SAHNITQGNI 251 300 ENSP00000370981/1-596 LQDSNMMSLK ALSFSDGGSK LGHSNKADKG PSCVRSPIST DECSIQELEQ ENSTTRP00000012943/1-585 LQXXXXXXXX XXSFSDGGSK LAHPSRADKG --SIRSPI-T DQCTVQDLEQ ENSBTAP00000001114/1-627 LQDSNMMSLK ALSFSDGGSK LAHASK-DKG --SVRSPIST DQCTIQELEK bmy_22316T0/1-598 LQDSNMTSLK ALSFSDGGSK LAHPSKADKG --SIRSPIST DQCTIQELEQ BACU002001/1-589 LQDSNMTSLK ALSFSDGGSK LAHPSKADKG --SIRSPIST DQCTIQELEQ 301 350 ENSP00000370981/1-596 KLLEREGALQ KLQRSFEEKE LASSLAYEER PRRCRDELEG PEPKGGNKLK ENSTTRP00000012943/1-585 KLLEREGELQ KLHRSFEEKG LAASQAYEER PRRCKDEPEG LEPKG--KLK ENSBTAP00000001114/1-627 QLLEREGELQ RLHRSFEEKE LAASQPYEER PRRCKDELEG LEAKG--KMK bmy_22316T0/1-598 KLLEREGERQ RLHRSFEEKE LAASQAYEER PRRCKDEPEG LEPKG--KLK BACU002001/1-589 KLLEREGELQ RLHRSFEEKE LAASQAYEER PRRCKDEPEG LEPKG--KLK 351 400 ENSP00000370981/1-596 QASQKSQRAQ QVLHLQVLQL QQEKRQLRQE LESLMKEQDL LETKLRSYER ENSTTRP00000012943/1-585 PAAQKSQRAQ QVLHLQVLQL QQEKRQLRQE LESLMKEQDL LETKLRSYEK ENSBTAP00000001114/1-627 VAAQKSQRAQ QVLHLQVLQL QQEKRQLRQE LESLMKEQDL LETKLRSYEK bmy_22316T0/1-598 SAAQKSQRAQ QVLHLQVLQL QQEKRQLRQE LESLMKEQDL LETKLRSYEK BACU002001/1-589 SAAQKSQRAQ QVLHLQVLQL QQEKRQLRQE LESLMKEQDL LETKLRSYEK 401 450 ENSP00000370981/1-596 EKTSFGPALE ETQWEVCQKS GEISLLKQQL KESQTEVNAK ASEILGLKAQ ENSTTRP00000012943/1-585 EKTSFVPALE ETQWEVCQKS GEISLLKQQL KESQTEINAK ASEILNLKAQ ENSBTAP00000001114/1-627 EKTSFAPALE ETQWEVCQKS GEISLLKQQL KESQTEINAK ASEILNLKAQ bmy_22316T0/1-598 EKTSFVPALE ETQWEVCQKS GEISLLKQQL KESQTEINAK ASEILNLKAQ BACU002001/1-589 EKTSFVPALE ETQWEVCQKS GEISLLKQQL KESQTEINAK ASEILNLKAQ 451 500 ENSP00000370981/1-596 LKDTRGKLEG LELRTQDLEG ALRTKGLELE VCENELQRKK NEAELLREKV ENSTTRP00000012943/1-585 LKDTRGRLEG LELKTQDLES ALRTKGLELE VCENELQRKK NEAELLREKV ENSBTAP00000001114/1-627 LKDTRGRLES LELKTQDLEN ALRTKGLELE VCENELQRKK NEAELLREKV bmy_22316T0/1-598 LKDTRGRLEG LELKTQDLES ALRTKGLELE VCENELQRKK NEAELLREKV BACU002001/1-589 LKDTRGRLEG LELKTQDLES ALRTKGLELE VCENELQRKK NEAELLREKV 501 550 ENSP00000370981/1-596 NLLEQELQEL RAQAALARDM -----GPPT- FPEDVPALQR ELERLRAELR ENSTTRP00000012943/1-585 NLL-----EL QAQAALPRGR -----GPPA- SAEDVPALQR ELERLRAELR ENSBTAP00000001114/1-627 NLLEQELLEL RAQAALQRSR DAAALGPAS- -ADDVPALQR ELERLRAELK bmy_22316T0/1-598 NLLEQELLEL QAQAALPRGR DTAALGPASA APEDVPALQR ELERLRAELR BACU002001/1-589 NLLEQELLEL QAQAAL---- -----GPASA APEDMPALQR ELERLRAELR 551 600 ENSP00000370981/1-596 EERQGHDQMS SGFQHERLVW KEEKEKVIQY QKQLQQSYVA MYQRNQRLEK ENSTTRP00000012943/1-585 EERQGHDQMS SGFQHERLLW KEEKEKVIQY QKQLQQSYLA MYQRNQRLEK ENSBTAP00000001114/1-627 EERQGHDQMS SGFQHERLVW KEEKEKVIQY QKQLQQSYLA MYQRNQRLEK bmy_22316T0/1-598 EERQGHDQMS SGFQHERLVW KEEKEKVIQY QKQLQQSYLA MYQRNQRLEK BACU002001/1-589 EERQGHDQMS SGFQHERLVW KEEKEKVIQY QKQLQQSYLA MYQRNQRLEK 601 650 ENSP00000370981/1-596 ALQQLARGDS AGEPLEVDLE GADIPYEDII ATEI ENSTTRP00000012943/1-585 TLQQLARADG AGEPFEIDLE GADIPYEDII ATEI ENSBTAP00000001114/1-627 ALQQLARGDG AGEPFEIDLE GADIPYEDII ATEI bmy_22316T0/1-598 TLQQLARGDG AGEPFEIDLE GADIPYEDII ATEI BACU002001/1-589 TLQQLARGDG AGEPFEIDLE GADIPYEDII ATEI